RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SLC16A10Q8TF71 515 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 MAP4K1Q92918 833 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 KCNH8Q96L42 1107 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 FEZ1Q99689 392 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 RPTORQ8N122 1335 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 IRF6O14896 467 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 PTMAP06454 111 aaKnown RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 MKRN3Q13064 507 aaKnown RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 SBK1Q52WX2 424 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 STRA6Q9BX79 667 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 TEX13AQ9BXU3 409 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 EPB41L4AQ9HCS5 686 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 DIAPH3Q9NSV4 1193 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 CYP19A1P11511 503 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 RNF43Q68DV7 783 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 SCN10AQ9Y5Y9 1956 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 TESPA1A2RU30 521 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 TPM3P06753 285 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 HSP90AB1P08238 724 aaKnown RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 CAVIN1Q6NZI2 390 aaKnown RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 SSH1Q8WYL5 1049 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 UBXN6Q9BZV1 441 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 CHMP4BQ9H444 224 aaKnown RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.41□□□□□ -1.86
NEDD4-204ENST00000503468 PCDH11XQ9BZA7 1347 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 PCDH11YQ9BZA8 1340 aa3.41□□□□□ -1.86
NEDD4-204ENST00000503468 FRAT2O75474 233 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-204ENST00000503468 NTSR2O95665 410 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 GABPB1Q06547 395 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-204ENST00000503468 KIAA2012Q0VF49 1180 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 BBXQ8WY36 941 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-204ENST00000503468 NEUROD6Q96NK8 337 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 MBIPQ9NS73 344 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 GTF2IRD1Q9UHL9 959 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 ZNF541Q9H0D2 1346 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 FOXO4P98177 505 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 AXDND1Q5T1B0 1012 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-204ENST00000503468 INTS5Q6P9B9 1019 aaKnown RBP3.4□□□□□ -1.86
NEDD4-204ENST00000503468 FAM184AQ8NB25 1140 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 STK36Q9NRP7 1315 aa3.4□□□□□ -1.86
NEDD4-204ENST00000503468 CAMTA2O94983 1202 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 CALRP27797 417 aaKnown RBP3.4□□□□□ -1.87
NEDD4-204ENST00000503468 MTHFSDQ2M296 383 aaKnown RBP3.4□□□□□ -1.87
NEDD4-204ENST00000503468 BTNL9Q6UXG8 535 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 SLKQ9H2G2 1235 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-204ENST00000503468 FAM124BQ9H5Z6 455 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-204ENST00000503468 TCP11L1Q9NUJ3 509 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 ABCB11O95342 1321 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 RCSD1Q6JBY9 416 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 CALCOCO1Q9P1Z2 691 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 TRPM7Q96QT4 1865 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 ATP5JP18859 108 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 CCDC142Q17RM4 750 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 C12orf42Q96LP6 360 aa3.4□□□□□ -1.87
NEDD4-204ENST00000503468 ZNF777Q9ULD5 760 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-204ENST00000503468 INPPL1O15357 1258 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 RNMTO43148 476 aaKnown RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 IL1R1P14778 569 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 DNTTIP2Q5QJE6 756 aaKnown RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 ARTNQ5T4W7 220 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 CEP85Q6P2H3 762 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 SH3RF1Q7Z6J0 888 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 PPP1R9BQ96SB3 815 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 DNAJC2Q99543 621 aaKnown RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 GRPEL1Q9HAV7 217 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 RNF216Q9NWF9 866 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 ZNF500O60304 480 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 XRCC6P12956 609 aaKnown RBP eCLIP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 NFIL3Q16649 462 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 SLC27A3Q5K4L6 730 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 AP1ARQ63HQ0 302 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 LRRC59Q96AG4 307 aaKnown RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 EHD4Q9H223 541 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 ZNF112Q9UJU3 913 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 IGSF9BQ9UPX0 1349 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 ADGRA2Q96PE1 1338 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 HSPA4P34932 840 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 FAXDC2Q96IV6 333 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 MBD3O95983 291 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 LMNB2Q03252 620 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 SASS6Q6UVJ0 657 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 MKL1Q969V6 931 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 SYAP1Q96A49 352 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 RRAGDQ9NQL2 400 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 PTPN12Q05209 780 aaKnown RBP3.39□□□□□ -1.87
NEDD4-204ENST00000503468 NTRK3Q16288 839 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 FBXO33Q7Z6M2 555 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 CAMKK2Q96RR4 588 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 PALD1Q9ULE6 856 aa3.39□□□□□ -1.87
NEDD4-204ENST00000503468 ATP2A1O14983 1001 aa3.38□□□□□ -1.87
NEDD4-204ENST00000503468 TRAK2O60296 914 aa3.38□□□□□ -1.87
NEDD4-204ENST00000503468 IGHDP01880 384 aa3.38□□□□□ -1.87
NEDD4-204ENST00000503468 HYIQ5T013 277 aa3.38□□□□□ -1.87
NEDD4-204ENST00000503468 APTXQ7Z2E3 356 aaKnown RBP3.38□□□□□ -1.87
NEDD4-204ENST00000503468 CCDC191Q8NCU4 936 aa3.38□□□□□ -1.87
NEDD4-204ENST00000503468 CCDC94Q9BW85 323 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-204ENST00000503468 NAP1L2Q9ULW6 460 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-204ENST00000503468 MYH1P12882 1939 aa3.38□□□□□ -1.87
NEDD4-204ENST00000503468 DIAPH1O60610 1272 aaKnown RBP3.38□□□□□ -1.87
NEDD4-204ENST00000503468 ADRB2P07550 413 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms