RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 LRCH3Q96II8 777 aa15.35■□□□□ 0.05
TNPO1-202ENST00000503084 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
TNPO1-202ENST00000503084 COL3A1P02461 1466 aaPredicted RBP15.34■□□□□ 0.05
TNPO1-202ENST00000503084 GRAPQ13588 217 aa15.34■□□□□ 0.05
TNPO1-202ENST00000503084 DOK7Q18PE1 504 aa15.34■□□□□ 0.05
TNPO1-202ENST00000503084 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
TNPO1-202ENST00000503084 SPRYD7Q5W111 196 aa15.34■□□□□ 0.05
TNPO1-202ENST00000503084 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
TNPO1-202ENST00000503084 GRAPLQ8TC17 118 aaPredicted RBP15.34■□□□□ 0.05
TNPO1-202ENST00000503084 SPTBN5Q9NRC6 3674 aaKnown RBP15.34■□□□□ 0.05
TNPO1-202ENST00000503084 MYCP01106 439 aaPredicted RBP15.33■□□□□ 0.04
TNPO1-202ENST00000503084 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.04
TNPO1-202ENST00000503084 PTPN12Q05209 780 aaKnown RBP15.33■□□□□ 0.04
TNPO1-202ENST00000503084 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
TNPO1-202ENST00000503084 IFNL1Q8IU54 200 aa15.33■□□□□ 0.04
TNPO1-202ENST00000503084 IGF2BP3O00425 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
TNPO1-202ENST00000503084 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
TNPO1-202ENST00000503084 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
TNPO1-202ENST00000503084 PARP10Q53GL7 1025 aa15.32■□□□□ 0.04
TNPO1-202ENST00000503084 DDX46Q7L014 1031 aaKnown RBP15.32■□□□□ 0.04
TNPO1-202ENST00000503084 COL4A1P02462 1669 aa15.32■□□□□ 0.04
TNPO1-202ENST00000503084 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
TNPO1-202ENST00000503084 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
TNPO1-202ENST00000503084 POLLQ9UGP5 575 aa15.31■□□□□ 0.04
TNPO1-202ENST00000503084 PTCH2Q9Y6C5 1203 aa15.31■□□□□ 0.04
TNPO1-202ENST00000503084 LAMB1P07942 1786 aa15.31■□□□□ 0.04
TNPO1-202ENST00000503084 C6orf229H3BNL8 230 aa15.3■□□□□ 0.04
TNPO1-202ENST00000503084 CRHR2Q13324 411 aa15.3■□□□□ 0.04
TNPO1-202ENST00000503084 GIGYF2Q6Y7W6 1299 aaKnown RBP15.3■□□□□ 0.04
TNPO1-202ENST00000503084 MCM10Q7L590 875 aa15.3■□□□□ 0.04
TNPO1-202ENST00000503084 DPF3Q92784 378 aa15.3■□□□□ 0.04
TNPO1-202ENST00000503084 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
TNPO1-202ENST00000503084 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
TNPO1-202ENST00000503084 RRP7AQ9Y3A4 280 aaKnown RBP15.3■□□□□ 0.04
TNPO1-202ENST00000503084 MANSC4A6NHS7 340 aaPredicted RBP15.29■□□□□ 0.04
TNPO1-202ENST00000503084 U2SURPO15042 1029 aaKnown RBP15.29■□□□□ 0.04
TNPO1-202ENST00000503084 MYL6BP14649 208 aa15.29■□□□□ 0.04
TNPO1-202ENST00000503084 PRKG1Q13976 671 aa15.29■□□□□ 0.04
TNPO1-202ENST00000503084 TMC4Q7Z404 712 aa15.29■□□□□ 0.04
TNPO1-202ENST00000503084 SHISA4Q96DD7 197 aa15.29■□□□□ 0.04
TNPO1-202ENST00000503084 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
TNPO1-202ENST00000503084 TTC28Q96AY4 2481 aa15.29■□□□□ 0.04
TNPO1-202ENST00000503084 PSME4Q14997 1843 aa15.29■□□□□ 0.04
TNPO1-202ENST00000503084 WTIPA6NIX2 430 aaPredicted RBP15.28■□□□□ 0.04
TNPO1-202ENST00000503084 NF2P35240 595 aa15.28■□□□□ 0.04
TNPO1-202ENST00000503084 GPSM2P81274 684 aa15.28■□□□□ 0.04
TNPO1-202ENST00000503084 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
TNPO1-202ENST00000503084 A0A1W2PPC1 479 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 SP3Q02447 781 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 AMER1Q5JTC6 1135 aaPredicted RBP15.27■□□□□ 0.04
TNPO1-202ENST00000503084 LDLRAD1Q5T700 205 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 NBPF11Q86T75 865 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 AGBL3Q8NEM8 1001 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 EYA3Q99504 573 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 KNSTRNQ9Y448 316 aa15.27■□□□□ 0.04
TNPO1-202ENST00000503084 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
TNPO1-202ENST00000503084 INHBEP58166 350 aa15.26■□□□□ 0.03
TNPO1-202ENST00000503084 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
TNPO1-202ENST00000503084 GMLQ99445 158 aa15.26■□□□□ 0.03
TNPO1-202ENST00000503084 STXBP5LQ9Y2K9 1186 aa15.26■□□□□ 0.03
TNPO1-202ENST00000503084 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
TNPO1-202ENST00000503084 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
TNPO1-202ENST00000503084 SH3TC2Q8TF17 1288 aa15.25■□□□□ 0.03
TNPO1-202ENST00000503084 CELF1Q92879 486 aaKnown RBP15.25■□□□□ 0.03
TNPO1-202ENST00000503084 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.25■□□□□ 0.03
TNPO1-202ENST00000503084 FZD1Q9UP38 647 aa15.25■□□□□ 0.03
TNPO1-202ENST00000503084 ZBTB7BO15156 539 aaPredicted RBP15.24■□□□□ 0.03
TNPO1-202ENST00000503084 PRKAR2BP31323 418 aa15.24■□□□□ 0.03
TNPO1-202ENST00000503084 Q7L0L9 218 aa15.24■□□□□ 0.03
TNPO1-202ENST00000503084 DEFB123Q8N688 67 aa15.24■□□□□ 0.03
TNPO1-202ENST00000503084 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
TNPO1-202ENST00000503084 WNK4Q96J92 1243 aa15.24■□□□□ 0.03
TNPO1-202ENST00000503084 MIS18AQ9NYP9 233 aa15.24■□□□□ 0.03
TNPO1-202ENST00000503084 ANGEL1Q9UNK9 670 aaKnown RBP15.24■□□□□ 0.03
TNPO1-202ENST00000503084 ZSWIM8A7E2V4 1837 aa15.23■□□□□ 0.03
TNPO1-202ENST00000503084 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
TNPO1-202ENST00000503084 RTF1Q92541 710 aaKnown RBP15.23■□□□□ 0.03
TNPO1-202ENST00000503084 CLMNQ96JQ2 1002 aa15.23■□□□□ 0.03
TNPO1-202ENST00000503084 UBE2Q1Q7Z7E8 422 aa15.22■□□□□ 0.03
TNPO1-202ENST00000503084 NLRP10Q86W26 655 aa15.22■□□□□ 0.03
TNPO1-202ENST00000503084 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.22■□□□□ 0.03
TNPO1-202ENST00000503084 SSC5DA1L4H1 1573 aa15.22■□□□□ 0.03
TNPO1-202ENST00000503084 ZNF646O15015 1829 aaPredicted RBP15.22■□□□□ 0.03
TNPO1-202ENST00000503084 SH3TC1Q8TE82 1336 aa15.21■□□□□ 0.03
TNPO1-202ENST00000503084 HTATIP2Q9BUP3 242 aa15.21■□□□□ 0.03
TNPO1-202ENST00000503084 ZC3H12CQ9C0D7 883 aaKnown RBP15.21■□□□□ 0.03
TNPO1-202ENST00000503084 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
TNPO1-202ENST00000503084 PRDM6Q9NQX0 595 aa15.21■□□□□ 0.03
TNPO1-202ENST00000503084 NR2E3Q9Y5X4 410 aa15.21■□□□□ 0.03
TNPO1-202ENST00000503084 G3V3G9 751 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 WNT10BO00744 389 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 UFL1O94874 794 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 SASH1O94885 1247 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 DCAF8Q5TAQ9 597 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 SLC10A4Q96EP9 437 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 PTPN18Q99952 460 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 TRMT112Q9UI30 125 aaKnown RBP15.2■□□□□ 0.02
TNPO1-202ENST00000503084 EYSQ5T1H1 3165 aa15.2■□□□□ 0.02
TNPO1-202ENST00000503084 GJA5P36382 358 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms