RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 FZD1Q9UP38 647 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 COL3A1P02461 1466 aaPredicted RBP6.71□□□□□ -1.34
HTT-202ENST00000502820 MKI67P46013 3256 aaKnown RBP6.7□□□□□ -1.34
HTT-202ENST00000502820 DIAPH1O60610 1272 aaKnown RBP6.7□□□□□ -1.34
HTT-202ENST00000502820 BBOX1O75936 387 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 FKBP1BP68106 108 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 PTPN12Q05209 780 aaKnown RBP6.7□□□□□ -1.34
HTT-202ENST00000502820 CC2D1BQ5T0F9 858 aaKnown RBP6.7□□□□□ -1.34
HTT-202ENST00000502820 Q7L0L9 218 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 MCM10Q7L590 875 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 ARMC9Q7Z3E5 817 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 GAS2L2Q8NHY3 880 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 RTFDC1Q9BY42 306 aaPredicted RBP6.7□□□□□ -1.34
HTT-202ENST00000502820 NOP58Q9Y2X3 529 aaKnown RBP6.7□□□□□ -1.34
HTT-202ENST00000502820 TRPM7Q96QT4 1865 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 UBN2Q6ZU65 1347 aa6.7□□□□□ -1.34
HTT-202ENST00000502820 SNED1Q8TER0 1413 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 SCN7AQ01118 1682 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 SOX1O00570 391 aaPredicted RBP6.69□□□□□ -1.34
HTT-202ENST00000502820 ALDH1A1P00352 501 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 RPS12P25398 132 aaKnown RBP6.69□□□□□ -1.34
HTT-202ENST00000502820 DCTN1Q14203 1278 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 IFNL1Q8IU54 200 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 DEFB123Q8N688 67 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 SLC10A4Q96EP9 437 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 UTP14AQ9BVJ6 771 aaKnown RBP6.69□□□□□ -1.34
HTT-202ENST00000502820 ZC3H12CQ9C0D7 883 aaKnown RBP6.69□□□□□ -1.34
HTT-202ENST00000502820 MYOZ2Q9NPC6 264 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 ANGEL1Q9UNK9 670 aaKnown RBP6.69□□□□□ -1.34
HTT-202ENST00000502820 PTCH2Q9Y6C5 1203 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 SCN11AQ9UI33 1791 aa6.69□□□□□ -1.34
HTT-202ENST00000502820 BCORQ6W2J9 1755 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 NTSR2O95665 410 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 GPSM2P81274 684 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 SP3Q02447 781 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 CRHR2Q13324 411 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 GRAPQ13588 217 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 OTUD7BQ6GQQ9 843 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 GRAPLQ8TC17 118 aaPredicted RBP6.68□□□□□ -1.34
HTT-202ENST00000502820 ARMC5Q96C12 935 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 EYA3Q99504 573 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 BIN2Q9UBW5 565 aaPredicted RBP6.68□□□□□ -1.34
HTT-202ENST00000502820 STAP2Q9UGK3 403 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 NR2E3Q9Y5X4 410 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 MAP3K15Q6ZN16 1313 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 PITPNM2Q9BZ72 1349 aa6.68□□□□□ -1.34
HTT-202ENST00000502820 MANSC4A6NHS7 340 aaPredicted RBP6.67□□□□□ -1.34
HTT-202ENST00000502820 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 ANP32AP39687 249 aaKnown RBP6.67□□□□□ -1.34
HTT-202ENST00000502820 AIMP1Q12904 312 aaKnown RBP6.67□□□□□ -1.34
HTT-202ENST00000502820 ARHGEF6Q15052 776 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 NBPF9Q3BBW0 867 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 SPRYD7Q5W111 196 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
HTT-202ENST00000502820 ZNF333Q96JL9 665 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 THUMPD2Q9BTF0 503 aaKnown RBP6.67□□□□□ -1.34
HTT-202ENST00000502820 HTATIP2Q9BUP3 242 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 ANKIB1Q9P2G1 1089 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 TRMT112Q9UI30 125 aaKnown RBP6.67□□□□□ -1.34
HTT-202ENST00000502820 SZT2Q5T011 3432 aa6.67□□□□□ -1.34
HTT-202ENST00000502820 ERVV-1B6SEH8 477 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 IGF2BP3O00425 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
HTT-202ENST00000502820 RGL2O15211 777 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 EVI5O60447 810 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 SASH1O94885 1247 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 EIF2S2P20042 333 aaKnown RBP6.66□□□□□ -1.34
HTT-202ENST00000502820 NOM1Q5C9Z4 860 aaKnown RBP6.66□□□□□ -1.34
HTT-202ENST00000502820 RSBN1LQ6PCB5 846 aaPredicted RBP6.66□□□□□ -1.34
HTT-202ENST00000502820 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 OGFOD1Q8N543 542 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 NECTIN2Q92692 538 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 FAM161BQ96MY7 647 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 MXD3Q9BW11 206 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 POLLQ9UGP5 575 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 RTL9Q8NET4 1388 aa6.66□□□□□ -1.34
HTT-202ENST00000502820 UFL1O94874 794 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 VIL1P09327 827 aaKnown RBP6.65□□□□□ -1.34
HTT-202ENST00000502820 COL9A1P20849 921 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 PPP2R1AP30153 589 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 PRKAR2BP31323 418 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 INHBEP58166 350 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 KIF22Q14807 665 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 MTFR1Q15390 333 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 PARP10Q53GL7 1025 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 CELF1Q92879 486 aaKnown RBP6.65□□□□□ -1.34
HTT-202ENST00000502820 CLMNQ96JQ2 1002 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 PHACTR3Q96KR7 559 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 RAPGEFL1Q9UHV5 662 aa6.65□□□□□ -1.34
HTT-202ENST00000502820 ARFGEF2Q9Y6D5 1785 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 ANXA1P04083 346 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 CAP1Q01518 475 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 GIGYF2Q6Y7W6 1299 aaKnown RBP6.64□□□□□ -1.35
HTT-202ENST00000502820 ZNF34Q8IZ26 560 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 TBC1D16Q8TBP0 767 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 CCDC85AQ96PX6 553 aaPredicted RBP6.64□□□□□ -1.35
HTT-202ENST00000502820 RSPH6AQ9H0K4 717 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 PRDM6Q9NQX0 595 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 STXBP5LQ9Y2K9 1186 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 CEMIPQ8WUJ3 1361 aa6.64□□□□□ -1.35
HTT-202ENST00000502820 RIC1Q4ADV7 1423 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms