RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
LINC00955-201ENST00000502775 DCPSQ96C86 337 aaKnown RBP16.6■□□□□ 0.25
LINC00955-201ENST00000502775 PODXL2Q9NZ53 605 aa16.6■□□□□ 0.25
LINC00955-201ENST00000502775 POLR2AP24928 1970 aaKnown RBP16.59■□□□□ 0.25
LINC00955-201ENST00000502775 SHTN1A0MZ66 631 aa16.59■□□□□ 0.25
LINC00955-201ENST00000502775 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
LINC00955-201ENST00000502775 HUNKP57058 714 aa16.59■□□□□ 0.25
LINC00955-201ENST00000502775 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
LINC00955-201ENST00000502775 SAMD7Q7Z3H4 446 aa16.59■□□□□ 0.25
LINC00955-201ENST00000502775 KRT26Q7Z3Y9 468 aa16.59■□□□□ 0.25
LINC00955-201ENST00000502775 MYD88Q99836 296 aa16.59■□□□□ 0.25
LINC00955-201ENST00000502775 GGA1Q9UJY5 639 aa16.59■□□□□ 0.25
LINC00955-201ENST00000502775 PDE8AO60658 829 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 UFL1O94874 794 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 DOK7Q18PE1 504 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 CCDC30Q5VVM6 783 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 C2orf69Q8N8R5 385 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.24
LINC00955-201ENST00000502775 CWC25Q9NXE8 425 aaPredicted RBP16.58■□□□□ 0.24
LINC00955-201ENST00000502775 ANKIB1Q9P2G1 1089 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 PSME4Q14997 1843 aa16.58■□□□□ 0.24
LINC00955-201ENST00000502775 COL4A1P02462 1669 aa16.57■□□□□ 0.24
LINC00955-201ENST00000502775 ZNF609O15014 1411 aa16.57■□□□□ 0.24
LINC00955-201ENST00000502775 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
LINC00955-201ENST00000502775 APAF1O14727 1248 aa16.57■□□□□ 0.24
LINC00955-201ENST00000502775 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
LINC00955-201ENST00000502775 GBA2Q9HCG7 927 aaPredicted RBP16.57■□□□□ 0.24
LINC00955-201ENST00000502775 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
LINC00955-201ENST00000502775 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
LINC00955-201ENST00000502775 RBM26Q5T8P6 1007 aaKnown RBP16.56■□□□□ 0.24
LINC00955-201ENST00000502775 RGMBQ6NW40 437 aa16.56■□□□□ 0.24
LINC00955-201ENST00000502775 ANKRD18AQ8IVF6 992 aa16.56■□□□□ 0.24
LINC00955-201ENST00000502775 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
LINC00955-201ENST00000502775 SEC31BQ9NQW1 1179 aa16.56■□□□□ 0.24
LINC00955-201ENST00000502775 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
LINC00955-201ENST00000502775 MYH3P11055 1940 aa16.56■□□□□ 0.24
LINC00955-201ENST00000502775 CASP8AP2Q9UKL3 1982 aa16.55■□□□□ 0.24
LINC00955-201ENST00000502775 XDHP47989 1333 aa16.55■□□□□ 0.24
LINC00955-201ENST00000502775 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
LINC00955-201ENST00000502775 AGBL3Q8NEM8 1001 aa16.55■□□□□ 0.24
LINC00955-201ENST00000502775 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
LINC00955-201ENST00000502775 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
LINC00955-201ENST00000502775 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
LINC00955-201ENST00000502775 CCDC85CA6NKD9 419 aa16.54■□□□□ 0.24
LINC00955-201ENST00000502775 ATP2B4P23634 1241 aa16.54■□□□□ 0.24
LINC00955-201ENST00000502775 GGA3Q9NZ52 723 aa16.54■□□□□ 0.24
LINC00955-201ENST00000502775 AKAP11Q9UKA4 1901 aa16.53■□□□□ 0.24
LINC00955-201ENST00000502775 ADM5C9JUS6 153 aa16.53■□□□□ 0.24
LINC00955-201ENST00000502775 EGFRP00533 1210 aa16.53■□□□□ 0.24
LINC00955-201ENST00000502775 NEXNQ0ZGT2 675 aa16.53■□□□□ 0.24
LINC00955-201ENST00000502775 RSBN1LQ6PCB5 846 aaPredicted RBP16.53■□□□□ 0.24
LINC00955-201ENST00000502775 KCNQ5Q9NR82 932 aa16.53■□□□□ 0.24
LINC00955-201ENST00000502775 SAGE1Q9NXZ1 904 aa16.53■□□□□ 0.24
LINC00955-201ENST00000502775 CTSWP56202 376 aa16.52■□□□□ 0.24
LINC00955-201ENST00000502775 STK31Q9BXU1 1019 aa16.52■□□□□ 0.24
LINC00955-201ENST00000502775 MCOLN1Q9GZU1 580 aa16.52■□□□□ 0.24
LINC00955-201ENST00000502775 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
LINC00955-201ENST00000502775 ZNF280AP59817 542 aaPredicted RBP16.51■□□□□ 0.23
LINC00955-201ENST00000502775 FAM161AQ3B820 660 aa16.51■□□□□ 0.23
LINC00955-201ENST00000502775 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
LINC00955-201ENST00000502775 PODNQ7Z5L7 613 aa16.51■□□□□ 0.23
LINC00955-201ENST00000502775 C8orf58Q8NAV2 365 aa16.51■□□□□ 0.23
LINC00955-201ENST00000502775 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
LINC00955-201ENST00000502775 PITPNM2Q9BZ72 1349 aa16.5■□□□□ 0.23
LINC00955-201ENST00000502775 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
LINC00955-201ENST00000502775 FKBP1BP68106 108 aa16.5■□□□□ 0.23
LINC00955-201ENST00000502775 MLLT1Q03111 559 aaPredicted RBP16.5■□□□□ 0.23
LINC00955-201ENST00000502775 DGKZQ13574 1117 aa16.5■□□□□ 0.23
LINC00955-201ENST00000502775 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
LINC00955-201ENST00000502775 CDCA5Q96FF9 252 aa16.5■□□□□ 0.23
LINC00955-201ENST00000502775 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
LINC00955-201ENST00000502775 PAPPA2Q9BXP8 1791 aa16.5■□□□□ 0.23
LINC00955-201ENST00000502775 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
LINC00955-201ENST00000502775 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
LINC00955-201ENST00000502775 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
LINC00955-201ENST00000502775 FAM155AB1AL88 458 aaPredicted RBP16.49■□□□□ 0.23
LINC00955-201ENST00000502775 SLC10A3P09131 477 aa16.49■□□□□ 0.23
LINC00955-201ENST00000502775 USP17L8P0C7I0 530 aa16.49■□□□□ 0.23
LINC00955-201ENST00000502775 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
LINC00955-201ENST00000502775 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
LINC00955-201ENST00000502775 RGS19P49795 217 aa16.48■□□□□ 0.23
LINC00955-201ENST00000502775 KIF23Q02241 960 aaPredicted RBP16.48■□□□□ 0.23
LINC00955-201ENST00000502775 SCARF1Q14162 830 aa16.48■□□□□ 0.23
LINC00955-201ENST00000502775 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
LINC00955-201ENST00000502775 DLK2Q6UY11 383 aa16.48■□□□□ 0.23
LINC00955-201ENST00000502775 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
LINC00955-201ENST00000502775 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
LINC00955-201ENST00000502775 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
LINC00955-201ENST00000502775 MYOZ2Q9NPC6 264 aa16.48■□□□□ 0.23
LINC00955-201ENST00000502775 BSDC1Q9NW68 430 aaPredicted RBP16.48■□□□□ 0.23
LINC00955-201ENST00000502775 CACNA1FO60840 1977 aa16.47■□□□□ 0.23
LINC00955-201ENST00000502775 MYO3BQ8WXR4 1341 aa16.47■□□□□ 0.23
LINC00955-201ENST00000502775 MMP14P50281 582 aa16.47■□□□□ 0.23
LINC00955-201ENST00000502775 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
LINC00955-201ENST00000502775 GMLQ99445 158 aa16.47■□□□□ 0.23
LINC00955-201ENST00000502775 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
LINC00955-201ENST00000502775 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.23
LINC00955-201ENST00000502775 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
LINC00955-201ENST00000502775 OGFOD1Q8N543 542 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms