RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 STX1AQ16623 288 aa7.57□□□□□ -1.2
LINC00939-201ENST00000502479 BRAPQ7Z569 592 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 PALD1Q9ULE6 856 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 CPLX1O14810 134 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 KCNQ3O43525 872 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 PFKFB2O60825 505 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 PRIM1P49642 420 aaKnown RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 XPCQ01831 940 aaPredicted RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 USPL1Q5W0Q7 1092 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 NCOA7Q8NI08 942 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 GTF3C6Q969F1 213 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 NACAP1Q9BZK3 213 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 ZNF609O15014 1411 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 MROH5Q6ZUA9 1318 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 KIF2AO00139 706 aaPredicted RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 CBFA2T2O43439 604 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 SLC5A1P13866 664 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 XBP1P17861 261 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 ZNF512BQ96KM6 892 aaPredicted RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 FIBPO43427 364 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 KINO60870 393 aaKnown RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 PCCAP05165 728 aaPredicted RBP7.56□□□□□ -1.2
LINC00939-201ENST00000502479 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
LINC00939-201ENST00000502479 PDIA6Q15084 440 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 SF3A1Q15459 793 aaKnown RBP7.55□□□□□ -1.2
LINC00939-201ENST00000502479 RBSNQ9H1K0 784 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 ANO10Q9NW15 660 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 PA2G4Q9UQ80 394 aaKnown RBP7.55□□□□□ -1.2
LINC00939-201ENST00000502479 ZNF652Q9Y2D9 606 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 KDM4AO75164 1064 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 Q6ZUG5 572 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 UBE3BQ7Z3V4 1068 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 CLSTN2Q9H4D0 955 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 NAP1L2Q9ULW6 460 aaPredicted RBP7.55□□□□□ -1.2
LINC00939-201ENST00000502479 STRCP1A6NGW2 1772 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 DYNC1I1O14576 645 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 IGSF3O75054 1194 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 TNNT3P45378 269 aaPredicted RBP7.55□□□□□ -1.2
LINC00939-201ENST00000502479 WASHC4Q2M389 1173 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 CDC5LQ99459 802 aaKnown RBP7.55□□□□□ -1.2
LINC00939-201ENST00000502479 CNNM1Q9NRU3 951 aa7.55□□□□□ -1.2
LINC00939-201ENST00000502479 SAFBQ15424 915 aaKnown RBP eCLIP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 UNC5CLQ8IV45 518 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 KCNG4Q8TDN1 519 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 PDLIM2Q96JY6 352 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 PYM1Q9BRP8 204 aaKnown RBP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 RBM27Q9P2N5 1060 aaKnown RBP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 THRAP3Q9Y2W1 955 aaKnown RBP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 HSP90AA2PQ14568 343 aaPredicted RBP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 KRT23Q9C075 422 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 RNF41Q9H4P4 317 aaPredicted RBP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 RGPD5Q99666 1765 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 TNS2Q63HR2 1409 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 BECN2A8MW95 431 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 ZMYM1Q5SVZ6 1142 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 FBXL16Q8N461 479 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 EAF2Q96CJ1 260 aaPredicted RBP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 BRMS1Q9HCU9 246 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 MTMR6Q9Y217 621 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 ERVV-1B6SEH8 477 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 SASH1O94885 1247 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 PTH1RQ03431 593 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 LMBR1LQ6UX01 489 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 ZDHHC9Q9Y397 364 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 COL5A2P05997 1499 aaPredicted RBP7.54□□□□□ -1.2
LINC00939-201ENST00000502479 ZMYM6O95789 1325 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 ABCA3Q99758 1704 aa7.54□□□□□ -1.2
LINC00939-201ENST00000502479 ZNF213O14771 459 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 TAF5LO75529 589 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 SLC3A2P08195 630 aaKnown RBP7.53□□□□□ -1.2
LINC00939-201ENST00000502479 GSDMDP57764 484 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 PPP2R5BQ15173 497 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 PARP10Q53GL7 1025 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 TMTC2Q8N394 836 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
LINC00939-201ENST00000502479 PTPN12Q05209 780 aaKnown RBP7.53□□□□□ -1.2
LINC00939-201ENST00000502479 TCIRG1Q13488 830 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 ME3Q16798 604 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 CEP57L1Q8IYX8 460 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 ZBTB38Q8NAP3 1195 aaPredicted RBP7.53□□□□□ -1.2
LINC00939-201ENST00000502479 PANK2Q9BZ23 570 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 RRAGDQ9NQL2 400 aaPredicted RBP7.53□□□□□ -1.2
LINC00939-201ENST00000502479 FAM13BQ9NYF5 915 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 CCDC196A0A1B0GTZ2 297 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 IGKV5-2P06315 115 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 SLC39A6Q13433 755 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 PROSER3Q2NL68 480 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 OLFM4Q6UX06 510 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 TMEM87BQ96K49 555 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 TMEM63CQ9P1W3 806 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 NHSL1Q5SYE7 1610 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 RTL9Q8NET4 1388 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 KCPQ6ZWJ8 1503 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 CCDC69A6NI79 296 aa7.53□□□□□ -1.2
LINC00939-201ENST00000502479 RGL2O15211 777 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms