RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.57■□□□□ 0.4
PARP1-209ENST00000498787 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
PARP1-209ENST00000498787 SLC5A1P13866 664 aa17.57■□□□□ 0.4
PARP1-209ENST00000498787 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
PARP1-209ENST00000498787 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
PARP1-209ENST00000498787 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
PARP1-209ENST00000498787 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.57■□□□□ 0.4
PARP1-209ENST00000498787 APBA3O96018 575 aa17.56■□□□□ 0.4
PARP1-209ENST00000498787 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
PARP1-209ENST00000498787 ST18O60284 1047 aa17.55■□□□□ 0.4
PARP1-209ENST00000498787 PHF14O94880 888 aa17.55■□□□□ 0.4
PARP1-209ENST00000498787 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
PARP1-209ENST00000498787 KBTBD3Q8NAB2 608 aa17.55■□□□□ 0.4
PARP1-209ENST00000498787 DNAJC2Q99543 621 aaKnown RBP17.55■□□□□ 0.4
PARP1-209ENST00000498787 SNRKQ9NRH2 765 aa17.55■□□□□ 0.4
PARP1-209ENST00000498787 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
PARP1-209ENST00000498787 TUBGCP6Q96RT7 1819 aa17.54■□□□□ 0.4
PARP1-209ENST00000498787 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
PARP1-209ENST00000498787 TTF1Q15361 905 aaPredicted RBP17.54■□□□□ 0.4
PARP1-209ENST00000498787 VGLL2Q8N8G2 317 aa17.54■□□□□ 0.4
PARP1-209ENST00000498787 IL17RAQ96F46 866 aa17.54■□□□□ 0.4
PARP1-209ENST00000498787 TBC1D2Q9BYX2 928 aa17.54■□□□□ 0.4
PARP1-209ENST00000498787 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
PARP1-209ENST00000498787 MYH3P11055 1940 aa17.54■□□□□ 0.4
PARP1-209ENST00000498787 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
PARP1-209ENST00000498787 MCM2P49736 904 aa17.53■□□□□ 0.4
PARP1-209ENST00000498787 ST5P78524 1137 aa17.53■□□□□ 0.4
PARP1-209ENST00000498787 ZSCAN25Q6NSZ9 544 aa17.53■□□□□ 0.4
PARP1-209ENST00000498787 BRWD3Q6RI45 1802 aa17.53■□□□□ 0.4
PARP1-209ENST00000498787 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
PARP1-209ENST00000498787 LAMB2P55268 1798 aa17.53■□□□□ 0.4
PARP1-209ENST00000498787 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
PARP1-209ENST00000498787 CNBD1Q8NA66 436 aa17.52■□□□□ 0.4
PARP1-209ENST00000498787 KIF2CQ99661 725 aa17.52■□□□□ 0.4
PARP1-209ENST00000498787 LRP5O75197 1615 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 FGFR2P21802 821 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 HSPA4P34932 840 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 NFIXQ14938 502 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 NLGN1Q8N2Q7 840 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.392e-6■□□□□ 8.2
PARP1-209ENST00000498787 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 TFCP2L1Q9NZI6 479 aa17.51■□□□□ 0.39
PARP1-209ENST00000498787 GOLIM4O00461 696 aa17.5■□□□□ 0.39
PARP1-209ENST00000498787 GYS1P13807 737 aa17.5■□□□□ 0.39
PARP1-209ENST00000498787 NMIQ13287 307 aaPredicted RBP17.5■□□□□ 0.39
PARP1-209ENST00000498787 UBE4AQ14139 1066 aa17.5■□□□□ 0.39
PARP1-209ENST00000498787 MCMDC2Q4G0Z9 681 aa17.5■□□□□ 0.39
PARP1-209ENST00000498787 LSG1Q9H089 658 aaKnown RBP17.5■□□□□ 0.39
PARP1-209ENST00000498787 GNL3LQ9NVN8 582 aaKnown RBP17.5■□□□□ 0.39
PARP1-209ENST00000498787 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
PARP1-209ENST00000498787 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
PARP1-209ENST00000498787 KCNJ4P48050 445 aa17.49■□□□□ 0.39
PARP1-209ENST00000498787 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
PARP1-209ENST00000498787 CCDC171Q6TFL3 1326 aa17.48■□□□□ 0.39
PARP1-209ENST00000498787 COL24A1Q17RW2 1714 aa17.48■□□□□ 0.39
PARP1-209ENST00000498787 K7ELQ4 463 aaPredicted RBP17.48■□□□□ 0.39
PARP1-209ENST00000498787 RNF113AO15541 343 aaKnown RBP17.48■□□□□ 0.39
PARP1-209ENST00000498787 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
PARP1-209ENST00000498787 TM4SF1P30408 202 aa17.48■□□□□ 0.39
PARP1-209ENST00000498787 ADORA1P30542 326 aa17.48■□□□□ 0.39
PARP1-209ENST00000498787 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
PARP1-209ENST00000498787 CHRNDQ07001 517 aa17.48■□□□□ 0.39
PARP1-209ENST00000498787 PROM2Q8N271 834 aa17.48■□□□□ 0.39
PARP1-209ENST00000498787 AK9Q5TCS8 1911 aa17.48■□□□□ 0.39
PARP1-209ENST00000498787 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
PARP1-209ENST00000498787 SERPINB2P05120 415 aa17.47■□□□□ 0.39
PARP1-209ENST00000498787 CCDC102BQ68D86 513 aa17.47■□□□□ 0.39
PARP1-209ENST00000498787 MAP4K1Q92918 833 aa17.47■□□□□ 0.39
PARP1-209ENST00000498787 AKT1S1Q96B36 256 aa17.47■□□□□ 0.39
PARP1-209ENST00000498787 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
PARP1-209ENST00000498787 MED23Q9ULK4 1368 aa17.46■□□□□ 0.39
PARP1-209ENST00000498787 HSP90AA1P07900 732 aaKnown RBP17.46■□□□□ 0.39
PARP1-209ENST00000498787 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
PARP1-209ENST00000498787 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
PARP1-209ENST00000498787 CAVIN4Q5BKX8 364 aa17.46■□□□□ 0.39
PARP1-209ENST00000498787 POTEAQ6S8J7 498 aa17.46■□□□□ 0.39
PARP1-209ENST00000498787 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
PARP1-209ENST00000498787 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
PARP1-209ENST00000498787 FAM227BQ96M60 508 aa17.46■□□□□ 0.39
PARP1-209ENST00000498787 RGS17Q9UGC6 210 aaPredicted RBP17.46■□□□□ 0.39
PARP1-209ENST00000498787 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
PARP1-209ENST00000498787 IGSF3O75054 1194 aa17.45■□□□□ 0.38
PARP1-209ENST00000498787 PSMA5P28066 241 aa17.45■□□□□ 0.38
PARP1-209ENST00000498787 ZMYM1Q5SVZ6 1142 aa17.45■□□□□ 0.38
PARP1-209ENST00000498787 TMC4Q7Z404 712 aa17.45■□□□□ 0.38
PARP1-209ENST00000498787 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
PARP1-209ENST00000498787 KCNB2Q92953 911 aa17.45■□□□□ 0.38
PARP1-209ENST00000498787 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
PARP1-209ENST00000498787 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
PARP1-209ENST00000498787 A0A0D9SFI3 127 aa17.44■□□□□ 0.38
PARP1-209ENST00000498787 ZBTB22O15209 634 aa17.44■□□□□ 0.38
PARP1-209ENST00000498787 GRAPQ13588 217 aa17.44■□□□□ 0.38
PARP1-209ENST00000498787 KRT32Q14532 448 aa17.44■□□□□ 0.38
PARP1-209ENST00000498787 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
PARP1-209ENST00000498787 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
PARP1-209ENST00000498787 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
PARP1-209ENST00000498787 MINPP1Q9UNW1 487 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms