RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 CAPNS2Q96L46 248 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 SCN9AQ15858 1988 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 HIRAP54198 1017 aaPredicted RBP14.19□□□□□ -0.14
LSAMP-206ENST00000498645 SAMD7Q7Z3H4 446 aa14.19□□□□□ -0.14
LSAMP-206ENST00000498645 ZC3H12CQ9C0D7 883 aaKnown RBP14.19□□□□□ -0.14
LSAMP-206ENST00000498645 MRS2Q9HD23 443 aa14.19□□□□□ -0.14
LSAMP-206ENST00000498645 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
LSAMP-206ENST00000498645 WBP1LQ9NX94 342 aa14.19□□□□□ -0.14
LSAMP-206ENST00000498645 SALL2Q9Y467 1007 aaPredicted RBP14.19□□□□□ -0.14
LSAMP-206ENST00000498645 POLR2AP24928 1970 aaKnown RBP14.18□□□□□ -0.14
LSAMP-206ENST00000498645 PI4KAP2A4QPH2 592 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 ECE1P42892 770 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 LBX1P52954 281 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 TWISTNBQ3B726 338 aaPredicted RBP14.18□□□□□ -0.14
LSAMP-206ENST00000498645 TBC1D10BQ4KMP7 808 aaPredicted RBP14.18□□□□□ -0.14
LSAMP-206ENST00000498645 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
LSAMP-206ENST00000498645 KSR2Q6VAB6 950 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 ANKRD18AQ8IVF6 992 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 PI4KAP1Q8N8J0 262 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 GGA1Q9UJY5 639 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 TLL2Q9Y6L7 1015 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 THSD7BQ9C0I4 1608 aa14.18□□□□□ -0.14
LSAMP-206ENST00000498645 IGKV5-2P06315 115 aa14.17□□□□□ -0.14
LSAMP-206ENST00000498645 MAP2K1Q02750 393 aaPredicted RBP14.17□□□□□ -0.14
LSAMP-206ENST00000498645 CWF19L2Q2TBE0 894 aaKnown RBP14.17□□□□□ -0.14
LSAMP-206ENST00000498645 CDC37L1Q7L3B6 337 aa14.17□□□□□ -0.14
LSAMP-206ENST00000498645 ZC3H15Q8WU90 426 aaKnown RBP14.17□□□□□ -0.14
LSAMP-206ENST00000498645 RTL9Q8NET4 1388 aa14.17□□□□□ -0.14
LSAMP-206ENST00000498645 ANP32CO43423 234 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 AOC2O75106 756 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 EGFRP00533 1210 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 CTSWP56202 376 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 CCDC27Q2M243 656 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 G2E3Q7L622 706 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 USP48Q86UV5 1035 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 DPF2Q92785 391 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 BEGAINQ9BUH8 593 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 PODXL2Q9NZ53 605 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 PGAP2Q9UHJ9 254 aa14.16□□□□□ -0.14
LSAMP-206ENST00000498645 HSPA8P11142 646 aaKnown RBP14.15□□□□□ -0.14
LSAMP-206ENST00000498645 RPS12P25398 132 aaKnown RBP14.15□□□□□ -0.14
LSAMP-206ENST00000498645 DLK2Q6UY11 383 aa14.15□□□□□ -0.14
LSAMP-206ENST00000498645 UBE3BQ7Z3V4 1068 aa14.15□□□□□ -0.14
LSAMP-206ENST00000498645 SAPCD2Q86UD0 394 aa14.15□□□□□ -0.14
LSAMP-206ENST00000498645 CDC5LQ99459 802 aaKnown RBP14.15□□□□□ -0.14
LSAMP-206ENST00000498645 PSME4Q14997 1843 aa14.15□□□□□ -0.14
LSAMP-206ENST00000498645 XDHP47989 1333 aa14.15□□□□□ -0.15
LSAMP-206ENST00000498645 NEURL1BA8MQ27 555 aa14.14□□□□□ -0.15
LSAMP-206ENST00000498645 KIF4BQ2VIQ3 1234 aa14.14□□□□□ -0.15
LSAMP-206ENST00000498645 KRT26Q7Z3Y9 468 aa14.14□□□□□ -0.15
LSAMP-206ENST00000498645 GREM2Q9H772 168 aa14.14□□□□□ -0.15
LSAMP-206ENST00000498645 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
LSAMP-206ENST00000498645 FANCIQ9NVI1 1328 aa14.14□□□□□ -0.15
LSAMP-206ENST00000498645 ADM5C9JUS6 153 aa14.13□□□□□ -0.15
LSAMP-206ENST00000498645 ZEB1P37275 1124 aaPredicted RBP14.13□□□□□ -0.15
LSAMP-206ENST00000498645 FKBP5Q13451 457 aaPredicted RBP14.13□□□□□ -0.15
LSAMP-206ENST00000498645 TTLL11Q8NHH1 800 aa14.13□□□□□ -0.15
LSAMP-206ENST00000498645 DCPSQ96C86 337 aaKnown RBP14.13□□□□□ -0.15
LSAMP-206ENST00000498645 TSKSQ9UJT2 592 aa14.13□□□□□ -0.15
LSAMP-206ENST00000498645 IL16Q14005 1332 aa14.13□□□□□ -0.15
LSAMP-206ENST00000498645 VIL1P09327 827 aaKnown RBP14.12□□□□□ -0.15
LSAMP-206ENST00000498645 ATP2B4P23634 1241 aa14.12□□□□□ -0.15
LSAMP-206ENST00000498645 FLIIQ13045 1269 aa14.12□□□□□ -0.15
LSAMP-206ENST00000498645 FBXW7Q969H0 707 aa14.12□□□□□ -0.15
LSAMP-206ENST00000498645 GGA3Q9NZ52 723 aa14.12□□□□□ -0.15
LSAMP-206ENST00000498645 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
LSAMP-206ENST00000498645 WTIPA6NIX2 430 aaPredicted RBP14.11□□□□□ -0.15
LSAMP-206ENST00000498645 HUNKP57058 714 aa14.11□□□□□ -0.15
LSAMP-206ENST00000498645 ASTN2O75129 1339 aaPredicted RBP14.11□□□□□ -0.15
LSAMP-206ENST00000498645 H7C1W4 665 aa14.1□□□□□ -0.15
LSAMP-206ENST00000498645 MAP2K2P36507 400 aa14.1□□□□□ -0.15
LSAMP-206ENST00000498645 IGHMBP2P38935 993 aaKnown RBP14.1□□□□□ -0.15
LSAMP-206ENST00000498645 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
LSAMP-206ENST00000498645 GCKRQ14397 625 aa14.1□□□□□ -0.15
LSAMP-206ENST00000498645 RSBN1LQ6PCB5 846 aaPredicted RBP14.1□□□□□ -0.15
LSAMP-206ENST00000498645 SULF1Q8IWU6 871 aa14.1□□□□□ -0.15
LSAMP-206ENST00000498645 DNAAF4Q8WXU2 420 aa14.1□□□□□ -0.15
LSAMP-206ENST00000498645 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
LSAMP-206ENST00000498645 BSDC1Q9NW68 430 aaPredicted RBP14.1□□□□□ -0.15
LSAMP-206ENST00000498645 MINPP1Q9UNW1 487 aa14.1□□□□□ -0.15
LSAMP-206ENST00000498645 USP17L3A6NCW0 530 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 USP17L4A6NCW7 530 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 FAM161AQ3B820 660 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 C2orf69Q8N8R5 385 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 HHIPL1Q96JK4 782 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 GBA2Q9HCG7 927 aaPredicted RBP14.09□□□□□ -0.15
LSAMP-206ENST00000498645 MED23Q9ULK4 1368 aa14.09□□□□□ -0.15
LSAMP-206ENST00000498645 USP17L8P0C7I0 530 aa14.08□□□□□ -0.16
LSAMP-206ENST00000498645 ITGA6P23229 1130 aa14.08□□□□□ -0.16
LSAMP-206ENST00000498645 CCT4P50991 539 aaKnown RBP14.08□□□□□ -0.16
LSAMP-206ENST00000498645 SCARF1Q14162 830 aa14.08□□□□□ -0.16
LSAMP-206ENST00000498645 ANGEL2Q5VTE6 544 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms