RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PKD1L3Q7Z443 1732 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 CCDC192P0DO97 292 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 FAM98CQ17RN3 349 aaKnown RBP19.42■□□□□ 0.7
COL6A1-206ENST00000498614 ZNF589Q86UQ0 364 aaPredicted RBP19.42■□□□□ 0.7
COL6A1-206ENST00000498614 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 DBNLQ9UJU6 430 aaKnown RBP19.42■□□□□ 0.7
COL6A1-206ENST00000498614 NDUFB9Q9Y6M9 179 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 SPATA31A5Q5VU36 1347 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 SPATA31A7Q8IWB4 1347 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 A0A087WZG4 1122 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 TTC6Q86TZ1 520 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 TCEANC2Q96MN5 208 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 TAF6LQ9Y6J9 622 aa19.42■□□□□ 0.7
COL6A1-206ENST00000498614 TNNI3KQ59H18 835 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 SNRKQ9NRH2 765 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 TPCN1Q9ULQ1 816 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 FPGT-TNNI3KV9GXZ4 949 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 MED23Q9ULK4 1368 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 AFF2P51816 1311 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 NRAPQ86VF7 1730 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 RIOK3O14730 519 aaKnown RBP19.41■□□□□ 0.7
COL6A1-206ENST00000498614 PPP4R3BQ5MIZ7 849 aa19.41■□□□□ 0.7
COL6A1-206ENST00000498614 TPM3P06753 285 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 LIG1P18858 919 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 CBX1P83916 185 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 FAM173BQ6P4H8 233 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 A0A0G2JS52 829 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 CAMK4Q16566 473 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 ATP2B3Q16720 1220 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 FERMT3Q86UX7 667 aa19.4■□□□□ 0.7
COL6A1-206ENST00000498614 PCDH11XQ9BZA7 1347 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 PCDH11YQ9BZA8 1340 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 ZSCAN20P17040 1043 aaPredicted RBP19.39■□□□□ 0.69
COL6A1-206ENST00000498614 RABL6Q3YEC7 729 aaPredicted RBP19.39■□□□□ 0.69
COL6A1-206ENST00000498614 CDC37L1Q7L3B6 337 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 MRVI1Q9Y6F6 885 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 EP400Q96L91 3159 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 GLI3P10071 1580 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 KAT6BQ8WYB5 2073 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 EXOC5O00471 708 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 CHGBP05060 677 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 PTGS1P23219 599 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 PSMA5P28066 241 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 LARP1BQ659C4 914 aaKnown RBP19.39■□□□□ 0.69
COL6A1-206ENST00000498614 FAM200AQ8TCP9 573 aa19.39■□□□□ 0.69
COL6A1-206ENST00000498614 GOLGA6L6A8MZA4 724 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 ATP5JP18859 108 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 DMTNQ08495 405 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 MAP3K11Q16584 847 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 RNF20Q5VTR2 975 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 BLOC1S2Q6QNY1 142 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 LUZP1Q86V48 1076 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 PLBD2Q8NHP8 589 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 DNAJC2Q99543 621 aaKnown RBP19.38■□□□□ 0.69
COL6A1-206ENST00000498614 DBNDD2Q9BQY9 259 aa19.38■□□□□ 0.69
COL6A1-206ENST00000498614 KRT85P78386 507 aa19.37■□□□□ 0.69
COL6A1-206ENST00000498614 TYRO3Q06418 890 aa19.37■□□□□ 0.69
COL6A1-206ENST00000498614 NUP62CLQ9H1M0 184 aa19.37■□□□□ 0.69
COL6A1-206ENST00000498614 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
COL6A1-206ENST00000498614 CASP7P55210 303 aa19.37■□□□□ 0.69
COL6A1-206ENST00000498614 LMBR1LQ6UX01 489 aa19.37■□□□□ 0.69
COL6A1-206ENST00000498614 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 TAF5LO75529 589 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 CHAF1AQ13111 956 aaPredicted RBP19.36■□□□□ 0.69
COL6A1-206ENST00000498614 VPS72Q15906 364 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 NBPF14Q5TI25 921 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
COL6A1-206ENST00000498614 NBPF15Q8N660 670 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 ZHX1Q9UKY1 873 aaPredicted RBP19.36■□□□□ 0.69
COL6A1-206ENST00000498614 PARP4Q9UKK3 1724 aaKnown RBP19.36■□□□□ 0.69
COL6A1-206ENST00000498614 DISP2A7MBM2 1401 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 COL15A1P39059 1388 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 RPS6KB1P23443 525 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 CKAP2LQ8IYA6 745 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 NWD2Q9ULI1 1742 aa19.36■□□□□ 0.69
COL6A1-206ENST00000498614 DDB1Q16531 1140 aa19.35■□□□□ 0.69
COL6A1-206ENST00000498614 CCDC129Q6ZRS4 1044 aa19.35■□□□□ 0.69
COL6A1-206ENST00000498614 TTLL7Q6ZT98 887 aa19.35■□□□□ 0.69
COL6A1-206ENST00000498614 PDCL2Q8N4E4 241 aa19.35■□□□□ 0.69
COL6A1-206ENST00000498614 UTP14CQ5TAP6 766 aaKnown RBP19.35■□□□□ 0.69
COL6A1-206ENST00000498614 SEC62Q99442 399 aaKnown RBP19.35■□□□□ 0.69
COL6A1-206ENST00000498614 ELP1O95163 1332 aa19.35■□□□□ 0.69
COL6A1-206ENST00000498614 TOB2Q14106 344 aaPredicted RBP19.34■□□□□ 0.69
COL6A1-206ENST00000498614 ANKRD7Q92527 254 aa19.34■□□□□ 0.69
COL6A1-206ENST00000498614 CBX8Q9HC52 389 aa19.34■□□□□ 0.69
COL6A1-206ENST00000498614 DACT1Q9NYF0 836 aa19.34■□□□□ 0.69
COL6A1-206ENST00000498614 PLEKHG2Q9H7P9 1386 aa19.34■□□□□ 0.69
COL6A1-206ENST00000498614 STK3Q13188 491 aa19.34■□□□□ 0.69
COL6A1-206ENST00000498614 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
COL6A1-206ENST00000498614 THRAP3Q9Y2W1 955 aaKnown RBP19.34■□□□□ 0.69
COL6A1-206ENST00000498614 ZNF609O15014 1411 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 A1BGP04217 495 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 FOXO4P98177 505 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 LRMPQ12912 555 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 ANO6Q4KMQ2 910 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 FAM182BQ5T319 152 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 CCDC186Q7Z3E2 898 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 TNMDQ9H2S6 317 aa19.33■□□□□ 0.69
COL6A1-206ENST00000498614 TFIP11Q9UBB9 837 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms