RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SOX10P56693 466 aa18.2■□□□□ 0.5
CCDC58-207ENST00000498466 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
CCDC58-207ENST00000498466 ANKRD13DQ6ZTN6 518 aa18.2■□□□□ 0.5
CCDC58-207ENST00000498466 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
CCDC58-207ENST00000498466 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
CCDC58-207ENST00000498466 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
CCDC58-207ENST00000498466 SLC10A3P09131 477 aa18.19■□□□□ 0.5
CCDC58-207ENST00000498466 HDGFL1Q5TGJ6 251 aa18.19■□□□□ 0.5
CCDC58-207ENST00000498466 TBC1D16Q8TBP0 767 aa18.19■□□□□ 0.5
CCDC58-207ENST00000498466 ISCA1Q9BUE6 129 aa18.19■□□□□ 0.5
CCDC58-207ENST00000498466 ZC3H12CQ9C0D7 883 aaKnown RBP18.19■□□□□ 0.5
CCDC58-207ENST00000498466 G3V3G9 751 aa18.18■□□□□ 0.5
CCDC58-207ENST00000498466 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
CCDC58-207ENST00000498466 DCAF8Q5TAQ9 597 aa18.18■□□□□ 0.5
CCDC58-207ENST00000498466 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
CCDC58-207ENST00000498466 IRS4O14654 1257 aaPredicted RBP18.17■□□□□ 0.5
CCDC58-207ENST00000498466 VIL1P09327 827 aaKnown RBP18.17■□□□□ 0.5
CCDC58-207ENST00000498466 RPS8P62241 208 aaKnown RBP18.17■□□□□ 0.5
CCDC58-207ENST00000498466 CDCA5Q96FF9 252 aa18.17■□□□□ 0.5
CCDC58-207ENST00000498466 CSRNP1Q96S65 589 aa18.17■□□□□ 0.5
CCDC58-207ENST00000498466 ASTN2O75129 1339 aaPredicted RBP18.17■□□□□ 0.5
CCDC58-207ENST00000498466 CHL1O00533 1208 aa18.16■□□□□ 0.5
CCDC58-207ENST00000498466 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
CCDC58-207ENST00000498466 UFL1O94874 794 aa18.15■□□□□ 0.5
CCDC58-207ENST00000498466 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
CCDC58-207ENST00000498466 CTU1Q7Z7A3 348 aaKnown RBP18.15■□□□□ 0.5
CCDC58-207ENST00000498466 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
CCDC58-207ENST00000498466 COL4A1P02462 1669 aa18.15■□□□□ 0.5
CCDC58-207ENST00000498466 SCARF1Q14162 830 aa18.14■□□□□ 0.49
CCDC58-207ENST00000498466 ANGEL2Q5VTE6 544 aaKnown RBP18.14■□□□□ 0.49
CCDC58-207ENST00000498466 CCDC146Q8IYE0 955 aa18.14■□□□□ 0.49
CCDC58-207ENST00000498466 REM2Q8IYK8 340 aaPredicted RBP18.14■□□□□ 0.49
CCDC58-207ENST00000498466 PODXL2Q9NZ53 605 aa18.14■□□□□ 0.49
CCDC58-207ENST00000498466 GGA1Q9UJY5 639 aa18.14■□□□□ 0.49
CCDC58-207ENST00000498466 HOXB7P09629 217 aa18.13■□□□□ 0.49
CCDC58-207ENST00000498466 RSBN1LQ6PCB5 846 aaPredicted RBP18.13■□□□□ 0.49
CCDC58-207ENST00000498466 RASAL3Q86YV0 1011 aa18.13■□□□□ 0.49
CCDC58-207ENST00000498466 SEC31BQ9NQW1 1179 aa18.13■□□□□ 0.49
CCDC58-207ENST00000498466 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
CCDC58-207ENST00000498466 ZNF280AP59817 542 aaPredicted RBP18.12■□□□□ 0.49
CCDC58-207ENST00000498466 TRIM28Q13263 835 aaKnown RBP18.12■□□□□ 0.49
CCDC58-207ENST00000498466 AGBL3Q8NEM8 1001 aa18.12■□□□□ 0.49
CCDC58-207ENST00000498466 POLR2AP24928 1970 aaKnown RBP18.11■□□□□ 0.49
CCDC58-207ENST00000498466 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
CCDC58-207ENST00000498466 FKBP1BP68106 108 aa18.11■□□□□ 0.49
CCDC58-207ENST00000498466 RIC3Q7Z5B4 369 aa18.11■□□□□ 0.49
CCDC58-207ENST00000498466 ZBTB38Q8NAP3 1195 aaPredicted RBP18.11■□□□□ 0.49
CCDC58-207ENST00000498466 MYOZ2Q9NPC6 264 aa18.1■□□□□ 0.49
CCDC58-207ENST00000498466 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
CCDC58-207ENST00000498466 AKAP11Q9UKA4 1901 aa18.1■□□□□ 0.49
CCDC58-207ENST00000498466 USP17L8P0C7I0 530 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 RALBP1Q15311 655 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 PRPF38BQ5VTL8 546 aaKnown RBP18.09■□□□□ 0.49
CCDC58-207ENST00000498466 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 HDAC9Q9UKV0 1011 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 SCN9AQ15858 1988 aa18.09■□□□□ 0.49
CCDC58-207ENST00000498466 ZNF609O15014 1411 aa18.08■□□□□ 0.49
CCDC58-207ENST00000498466 PITPNM2Q9BZ72 1349 aa18.08■□□□□ 0.49
CCDC58-207ENST00000498466 MOB2Q70IA6 237 aa18.08■□□□□ 0.48
CCDC58-207ENST00000498466 CCDC85AQ96PX6 553 aaPredicted RBP18.08■□□□□ 0.48
CCDC58-207ENST00000498466 SCAF8Q9UPN6 1271 aaKnown RBP18.08■□□□□ 0.48
CCDC58-207ENST00000498466 PAPPA2Q9BXP8 1791 aa18.07■□□□□ 0.48
CCDC58-207ENST00000498466 XDHP47989 1333 aa18.07■□□□□ 0.48
CCDC58-207ENST00000498466 PKN2Q16513 984 aaKnown RBP18.07■□□□□ 0.48
CCDC58-207ENST00000498466 RUNDC1Q96C34 613 aa18.07■□□□□ 0.48
CCDC58-207ENST00000498466 GMLQ99445 158 aa18.07■□□□□ 0.48
CCDC58-207ENST00000498466 MYD88Q99836 296 aa18.07■□□□□ 0.48
CCDC58-207ENST00000498466 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 UBE2Q2LH0YL09 131 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 PDE8AO60658 829 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 TBC1D8O95759 1140 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 TTLL12Q14166 644 aaPredicted RBP18.06■□□□□ 0.48
CCDC58-207ENST00000498466 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 PODNQ7Z5L7 613 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 ANKRD18AQ8IVF6 992 aa18.06■□□□□ 0.48
CCDC58-207ENST00000498466 ZNF296Q8WUU4 475 aaPredicted RBP18.06■□□□□ 0.48
CCDC58-207ENST00000498466 PDE4DIPQ5VU43 2346 aa18.05■□□□□ 0.48
CCDC58-207ENST00000498466 ATP2B4P23634 1241 aa18.05■□□□□ 0.48
CCDC58-207ENST00000498466 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCDC58-207ENST00000498466 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
CCDC58-207ENST00000498466 CCDC191Q8NCU4 936 aa18.05■□□□□ 0.48
CCDC58-207ENST00000498466 JARID2Q92833 1246 aaPredicted RBP18.05■□□□□ 0.48
CCDC58-207ENST00000498466 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
CCDC58-207ENST00000498466 PCCAP05165 728 aaPredicted RBP18.04■□□□□ 0.48
CCDC58-207ENST00000498466 MBIPQ9NS73 344 aa18.04■□□□□ 0.48
CCDC58-207ENST00000498466 CWC25Q9NXE8 425 aaPredicted RBP18.04■□□□□ 0.48
CCDC58-207ENST00000498466 MKRN3Q13064 507 aaKnown RBP18.03■□□□□ 0.48
CCDC58-207ENST00000498466 NBPF9Q3BBW0 867 aa18.03■□□□□ 0.48
CCDC58-207ENST00000498466 FBXW7Q969H0 707 aa18.03■□□□□ 0.48
CCDC58-207ENST00000498466 NF2P35240 595 aa18.02■□□□□ 0.48
CCDC58-207ENST00000498466 OGFOD1Q8N543 542 aa18.02■□□□□ 0.48
CCDC58-207ENST00000498466 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
CCDC58-207ENST00000498466 GPR25O00155 361 aa18.01■□□□□ 0.47
CCDC58-207ENST00000498466 ELL2O00472 640 aaPredicted RBP18.01■□□□□ 0.47
CCDC58-207ENST00000498466 TM4SF4P48230 202 aa18.01■□□□□ 0.47
CCDC58-207ENST00000498466 CDC5LQ99459 802 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms