RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 AOC2O75106 756 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 RGS19P49795 217 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 CASP7P55210 303 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 ALDH1L2Q3SY69 923 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 CRY2Q49AN0 593 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 UBE3BQ7Z3V4 1068 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 PNMA8AQ86V59 439 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 FTSJ3Q8IY81 847 aaKnown RBP12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 MASTLQ96GX5 879 aa12.63□□□□□ -0.39
TSPAN1-209ENST00000498443 WTIPA6NIX2 430 aaPredicted RBP12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 H7C1W4 665 aa12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 NPR1P16066 1061 aa12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 ECE1P42892 770 aa12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 GCKRQ14397 625 aa12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 CCDC191Q8NCU4 936 aa12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
TSPAN1-209ENST00000498443 LAMB2P55268 1798 aa12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 PCCAP05165 728 aaPredicted RBP12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 DGKZQ13574 1117 aa12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 MVPQ14764 893 aaKnown RBP12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 DDX19BQ9UMR2 479 aa12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 ABCC4O15439 1325 aa12.61□□□□□ -0.39
TSPAN1-209ENST00000498443 TRAF5O00463 557 aa12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 NBPF7P0C2Y1 421 aaPredicted RBP12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 LINS1Q8NG48 757 aa12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 CASP8AP2Q9UKL3 1982 aa12.6□□□□□ -0.39
TSPAN1-209ENST00000498443 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-209ENST00000498443 HOXA10P31260 410 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-209ENST00000498443 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-209ENST00000498443 SOX10P56693 466 aa12.59□□□□□ -0.39
TSPAN1-209ENST00000498443 NEXNQ0ZGT2 675 aa12.59□□□□□ -0.39
TSPAN1-209ENST00000498443 SUCLG2Q96I99 432 aa12.59□□□□□ -0.39
TSPAN1-209ENST00000498443 RLBP1P12271 317 aa12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 RGS3P49796 1198 aa12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 FOXO4P98177 505 aa12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 SF3B3Q15393 1217 aaKnown RBP12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 SRCIN1Q9C0H9 1055 aa12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 GREM2Q9H772 168 aa12.58□□□□□ -0.4
TSPAN1-209ENST00000498443 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 PDE8AO60658 829 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 EIF5BO60841 1220 aaKnown RBP12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 TRIM27P14373 513 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 BECN1Q14457 450 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 ATF7IPQ6VMQ6 1270 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 GPC2Q8N158 579 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 TTLL11Q8NHH1 800 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 ZNF594Q96JF6 807 aaPredicted RBP12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 CRAMP1Q96RY5 1269 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 USP44Q9H0E7 712 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 ZNF408Q9H9D4 720 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 THSD7BQ9C0I4 1608 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
TSPAN1-209ENST00000498443 GRM8O00222 908 aa12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 PPEF1O14829 653 aaPredicted RBP12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 IGHDP01880 384 aa12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 CTSWP56202 376 aa12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 ARHGAP45Q92619 1136 aa12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 TNRC18O15417 2968 aaPredicted RBP12.56□□□□□ -0.4
TSPAN1-209ENST00000498443 FZD9O00144 591 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 SNAP23O00161 211 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 EPS15P42566 896 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 GRAPQ13588 217 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 CST9Q5W186 159 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 GRAPLQ8TC17 118 aaPredicted RBP12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 MEIS3Q99687 375 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 TLL2Q9Y6L7 1015 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 PTPRCP08575 1304 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 CDHR2Q9BYE9 1310 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 TRPM7Q96QT4 1865 aa12.55□□□□□ -0.4
TSPAN1-209ENST00000498443 COL4A5P29400 1685 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 ALDH1L1O75891 902 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 CELF2O95319 508 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms