RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 KIF4AO95239 1232 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 PSAPL1Q6NUJ1 521 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 ELMSAN1Q6PJG2 1045 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 ZNF417Q8TAU3 575 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 ZNF587Q96SQ5 575 aaPredicted RBP8.65□□□□□ -1.02
SSR3-209ENST00000498205 FAM129BQ96TA1 746 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 ZBTB42B2RXF5 422 aa8.64□□□□□ -1.03
SSR3-209ENST00000498205 CES1P23141 567 aa8.64□□□□□ -1.03
SSR3-209ENST00000498205 STARD13Q9Y3M8 1113 aa8.64□□□□□ -1.03
SSR3-209ENST00000498205 PHACTR2O75167 634 aa8.63□□□□□ -1.03
SSR3-209ENST00000498205 TNFRSF21O75509 655 aa8.63□□□□□ -1.03
SSR3-209ENST00000498205 ALBP02768 609 aa8.63□□□□□ -1.03
SSR3-209ENST00000498205 CPB1P15086 417 aa8.63□□□□□ -1.03
SSR3-209ENST00000498205 HOXB4P17483 251 aaPredicted RBP8.63□□□□□ -1.03
SSR3-209ENST00000498205 EIF2AK2P19525 551 aaKnown RBP8.63□□□□□ -1.03
SSR3-209ENST00000498205 KCNMA1Q12791 1236 aa8.63□□□□□ -1.03
SSR3-209ENST00000498205 LINC00114Q6XXX2 140 aa8.63□□□□□ -1.03
SSR3-209ENST00000498205 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
SSR3-209ENST00000498205 ALKBH8Q96BT7 664 aaKnown RBP8.63□□□□□ -1.03
SSR3-209ENST00000498205 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
SSR3-209ENST00000498205 SNRPNP63162 240 aaKnown RBP8.62□□□□□ -1.03
SSR3-209ENST00000498205 NCAPG2Q86XI2 1143 aa8.62□□□□□ -1.03
SSR3-209ENST00000498205 ZSCAN29Q8IWY8 852 aaPredicted RBP8.62□□□□□ -1.03
SSR3-209ENST00000498205 NSUN5Q96P11 429 aaKnown RBP8.62□□□□□ -1.03
SSR3-209ENST00000498205 LPIN3Q9BQK8 851 aa8.62□□□□□ -1.03
SSR3-209ENST00000498205 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
SSR3-209ENST00000498205 CNTNAP5Q8WYK1 1306 aa8.61□□□□□ -1.03
SSR3-209ENST00000498205 SMNDC1O75940 238 aaKnown RBP eCLIP8.61□□□□□ -1.03
SSR3-209ENST00000498205 EDN3P14138 238 aa8.61□□□□□ -1.03
SSR3-209ENST00000498205 MAPK1P28482 360 aa8.61□□□□□ -1.03
SSR3-209ENST00000498205 PERM1Q5SV97 790 aa8.61□□□□□ -1.03
SSR3-209ENST00000498205 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.035e-9■■■■■ 29
SSR3-209ENST00000498205 DNAJC25Q9H1X3 360 aa8.61□□□□□ -1.03
SSR3-209ENST00000498205 AMOTL2Q9Y2J4 779 aa8.61□□□□□ -1.03
SSR3-209ENST00000498205 MLLT1Q03111 559 aaPredicted RBP8.6□□□□□ -1.03
SSR3-209ENST00000498205 C1orf127Q8N9H9 656 aa8.6□□□□□ -1.03
SSR3-209ENST00000498205 DCAF11Q8TEB1 546 aa8.6□□□□□ -1.03
SSR3-209ENST00000498205 PLD4Q96BZ4 506 aa8.6□□□□□ -1.03
SSR3-209ENST00000498205 SMG9Q9H0W8 520 aaKnown RBP8.6□□□□□ -1.03
SSR3-209ENST00000498205 SALL4Q9UJQ4 1053 aa8.6□□□□□ -1.03
SSR3-209ENST00000498205 A6NHS1 94 aa8.59□□□□□ -1.03
SSR3-209ENST00000498205 HFE2Q6ZVN8 426 aa8.59□□□□□ -1.03
SSR3-209ENST00000498205 NUDT8Q8WV74 236 aa8.59□□□□□ -1.03
SSR3-209ENST00000498205 MUC3BQ9H195 1237 aa8.59□□□□□ -1.03
SSR3-209ENST00000498205 ZFYVE28Q9HCC9 887 aa8.59□□□□□ -1.03
SSR3-209ENST00000498205 CNTN3Q9P232 1028 aa8.59□□□□□ -1.03
SSR3-209ENST00000498205 FAM177BA6PVY3 158 aa8.58□□□□□ -1.04
SSR3-209ENST00000498205 J3QW42 95 aa8.58□□□□□ -1.04
SSR3-209ENST00000498205 CPNE3O75131 537 aaKnown RBP8.58□□□□□ -1.04
SSR3-209ENST00000498205 NID1P14543 1247 aa8.58□□□□□ -1.04
SSR3-209ENST00000498205 AFF1P51825 1210 aaKnown RBP8.58□□□□□ -1.04
SSR3-209ENST00000498205 DTWD1Q8N5C7 304 aa8.58□□□□□ -1.04
SSR3-209ENST00000498205 CEP120Q8N960 986 aa8.58□□□□□ -1.04
SSR3-209ENST00000498205 CHRDQ9H2X0 955 aa8.58□□□□□ -1.04
SSR3-209ENST00000498205 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
SSR3-209ENST00000498205 ZBTB7CA1YPR0 619 aa8.57□□□□□ -1.04
SSR3-209ENST00000498205 PRRT3Q5FWE3 981 aa8.57□□□□□ -1.04
SSR3-209ENST00000498205 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
SSR3-209ENST00000498205 ASB16Q96NS5 453 aa8.57□□□□□ -1.04
SSR3-209ENST00000498205 CYP2E1P05181 493 aaPredicted RBP8.56□□□□□ -1.04
SSR3-209ENST00000498205 SPATA31C1P0DKV0 1188 aa8.56□□□□□ -1.04
SSR3-209ENST00000498205 IRS1P35568 1242 aa8.56□□□□□ -1.04
SSR3-209ENST00000498205 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
SSR3-209ENST00000498205 PBX4Q9BYU1 374 aa8.56□□□□□ -1.04
SSR3-209ENST00000498205 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
SSR3-209ENST00000498205 FOXD3Q9UJU5 478 aaPredicted RBP8.56□□□□□ -1.04
SSR3-209ENST00000498205 EREGO14944 169 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 GPR182O15218 404 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 RAC1P63000 192 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 TRIM28Q13263 835 aaKnown RBP8.55□□□□□ -1.04
SSR3-209ENST00000498205 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
SSR3-209ENST00000498205 GRIK5Q16478 980 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
SSR3-209ENST00000498205 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 WFDC8Q8IUA0 241 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 MAP4K3Q8IVH8 894 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
SSR3-209ENST00000498205 IGHA2P01877 340 aa8.54□□□□□ -1.04
SSR3-209ENST00000498205 FGD1P98174 961 aa8.54□□□□□ -1.04
SSR3-209ENST00000498205 RASSF7Q02833 373 aa8.54□□□□□ -1.04
SSR3-209ENST00000498205 CEP135Q66GS9 1140 aa8.54□□□□□ -1.04
SSR3-209ENST00000498205 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
SSR3-209ENST00000498205 GALNT12Q8IXK2 581 aa8.54□□□□□ -1.04
SSR3-209ENST00000498205 NIF3L1Q9GZT8 377 aa8.54□□□□□ -1.04
SSR3-209ENST00000498205 TREHO43280 583 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 EIF4EBP3O60516 100 aaPredicted RBP8.53□□□□□ -1.04
SSR3-209ENST00000498205 PTPRAP18433 802 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 ERCC3P19447 782 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 PLCB3Q01970 1234 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 TMEM102Q8N9M5 508 aaPredicted RBP8.53□□□□□ -1.04
SSR3-209ENST00000498205 NACC1Q96RE7 527 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 CSRNP1Q96S65 589 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 DZANK1Q9NVP4 752 aa8.53□□□□□ -1.04
SSR3-209ENST00000498205 GDF11O95390 407 aa8.52□□□□□ -1.05
SSR3-209ENST00000498205 COL19A1Q14993 1142 aa8.52□□□□□ -1.05
SSR3-209ENST00000498205 GDF6Q6KF10 455 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms