RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 CCDC85AQ96PX6 553 aaPredicted RBP29■■■□□ 2.23
CDKN2A-208ENST00000498124 KCNQ5Q9NR82 932 aa29■■■□□ 2.23
CDKN2A-208ENST00000498124 CNOT7Q9UIV1 285 aaKnown RBP29■■■□□ 2.23
CDKN2A-208ENST00000498124 WDR33Q9C0J8 1336 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-208ENST00000498124 ECE2O60344 883 aa28.99■■■□□ 2.23
CDKN2A-208ENST00000498124 MICALL2Q8IY33 904 aa28.99■■■□□ 2.23
CDKN2A-208ENST00000498124 EYA3Q99504 573 aa28.99■■■□□ 2.23
CDKN2A-208ENST00000498124 GLIS2Q9BZE0 524 aaPredicted RBP28.99■■■□□ 2.23
CDKN2A-208ENST00000498124 WBP1LQ9NX94 342 aa28.99■■■□□ 2.23
CDKN2A-208ENST00000498124 MYH3P11055 1940 aa28.98■■■□□ 2.23
CDKN2A-208ENST00000498124 FANCIQ9NVI1 1328 aa28.98■■■□□ 2.23
CDKN2A-208ENST00000498124 DOK7Q18PE1 504 aa28.98■■■□□ 2.23
CDKN2A-208ENST00000498124 FAM9BQ8IZU0 186 aa28.98■■■□□ 2.23
CDKN2A-208ENST00000498124 STK31Q9BXU1 1019 aa28.98■■■□□ 2.23
CDKN2A-208ENST00000498124 ZC3H15Q8WU90 426 aaKnown RBP28.97■■■□□ 2.23
CDKN2A-208ENST00000498124 DPF2Q92785 391 aa28.97■■■□□ 2.23
CDKN2A-208ENST00000498124 UFL1O94874 794 aa28.96■■■□□ 2.23
CDKN2A-208ENST00000498124 CTSWP56202 376 aa28.96■■■□□ 2.23
CDKN2A-208ENST00000498124 CWF19L2Q2TBE0 894 aaKnown RBP28.96■■■□□ 2.23
CDKN2A-208ENST00000498124 TLL2Q9Y6L7 1015 aa28.96■■■□□ 2.23
CDKN2A-208ENST00000498124 NEURL1BA8MQ27 555 aa28.95■■■□□ 2.22
CDKN2A-208ENST00000498124 EGFRP00533 1210 aa28.95■■■□□ 2.22
CDKN2A-208ENST00000498124 PSME4Q14997 1843 aa28.94■■■□□ 2.22
CDKN2A-208ENST00000498124 SPEF2Q9C093 1822 aa28.94■■■□□ 2.22
CDKN2A-208ENST00000498124 GGA1Q9UJY5 639 aa28.94■■■□□ 2.22
CDKN2A-208ENST00000498124 H7C1D1 291 aa28.93■■■□□ 2.22
CDKN2A-208ENST00000498124 SLC4A2P04920 1241 aa28.93■■■□□ 2.22
CDKN2A-208ENST00000498124 SAMD7Q7Z3H4 446 aa28.93■■■□□ 2.22
CDKN2A-208ENST00000498124 TTLL11Q8NHH1 800 aa28.93■■■□□ 2.22
CDKN2A-208ENST00000498124 CAPNS2Q96L46 248 aa28.93■■■□□ 2.22
CDKN2A-208ENST00000498124 ANKIB1Q9P2G1 1089 aa28.93■■■□□ 2.22
CDKN2A-208ENST00000498124 CELF2O95319 508 aaKnown RBP28.92■■■□□ 2.22
CDKN2A-208ENST00000498124 RPS12P25398 132 aaKnown RBP28.92■■■□□ 2.22
CDKN2A-208ENST00000498124 CYP4F22Q6NT55 531 aa28.92■■■□□ 2.22
CDKN2A-208ENST00000498124 ANKRD18AQ8IVF6 992 aa28.92■■■□□ 2.22
CDKN2A-208ENST00000498124 AIDAQ96BJ3 306 aa28.92■■■□□ 2.22
CDKN2A-208ENST00000498124 ZC3H12CQ9C0D7 883 aaKnown RBP28.92■■■□□ 2.22
CDKN2A-208ENST00000498124 ZNF609O15014 1411 aa28.92■■■□□ 2.22
CDKN2A-208ENST00000498124 CTCFP49711 727 aaPredicted RBP28.91■■■□□ 2.22
CDKN2A-208ENST00000498124 NEXNQ0ZGT2 675 aa28.91■■■□□ 2.22
CDKN2A-208ENST00000498124 FLIIQ13045 1269 aa28.91■■■□□ 2.22
CDKN2A-208ENST00000498124 GREM2Q9H772 168 aa28.91■■■□□ 2.22
CDKN2A-208ENST00000498124 PRDM10Q9NQV6 1147 aa28.91■■■□□ 2.22
CDKN2A-208ENST00000498124 XDHP47989 1333 aa28.91■■■□□ 2.22
CDKN2A-208ENST00000498124 H7C1W4 665 aa28.9■■■□□ 2.22
CDKN2A-208ENST00000498124 TBC1D10BQ4KMP7 808 aaPredicted RBP28.9■■■□□ 2.22
CDKN2A-208ENST00000498124 SAPCD2Q86UD0 394 aa28.9■■■□□ 2.22
CDKN2A-208ENST00000498124 VIL1P09327 827 aaKnown RBP28.89■■■□□ 2.22
CDKN2A-208ENST00000498124 DLK2Q6UY11 383 aa28.89■■■□□ 2.22
CDKN2A-208ENST00000498124 CDC37L1Q7L3B6 337 aa28.89■■■□□ 2.22
CDKN2A-208ENST00000498124 CACNA1FO60840 1977 aa28.89■■■□□ 2.22
CDKN2A-208ENST00000498124 ZNF646O15015 1829 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 WTIPA6NIX2 430 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 VAMP4O75379 141 aa28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 CAPN15O75808 1086 aa28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 CASP7P55210 303 aa28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 UBE3BQ7Z3V4 1068 aa28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 WDR63Q8IWG1 891 aa28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 CDC5LQ99459 802 aaKnown RBP28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 SPINK5Q9NQ38 1064 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 SALL2Q9Y467 1007 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-208ENST00000498124 HSPA8P11142 646 aaKnown RBP28.87■■■□□ 2.21
CDKN2A-208ENST00000498124 ECE1P42892 770 aa28.87■■■□□ 2.21
CDKN2A-208ENST00000498124 GCKRQ14397 625 aa28.87■■■□□ 2.21
CDKN2A-208ENST00000498124 PAXIP1Q6ZW49 1069 aaPredicted RBP28.87■■■□□ 2.21
CDKN2A-208ENST00000498124 MAP2K1Q02750 393 aaPredicted RBP28.86■■■□□ 2.21
CDKN2A-208ENST00000498124 USP48Q86UV5 1035 aa28.86■■■□□ 2.21
CDKN2A-208ENST00000498124 LBX1P52954 281 aa28.85■■■□□ 2.21
CDKN2A-208ENST00000498124 EXOSC9Q06265 439 aaKnown RBP28.85■■■□□ 2.21
CDKN2A-208ENST00000498124 PLA2G12BQ9BX93 195 aa28.85■■■□□ 2.21
CDKN2A-208ENST00000498124 ZNF408Q9H9D4 720 aa28.85■■■□□ 2.21
CDKN2A-208ENST00000498124 BSDC1Q9NW68 430 aaPredicted RBP28.85■■■□□ 2.21
CDKN2A-208ENST00000498124 MINPP1Q9UNW1 487 aa28.85■■■□□ 2.21
CDKN2A-208ENST00000498124 POLR2AP24928 1970 aaKnown RBP28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 AOC2O75106 756 aa28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 ATP2B4P23634 1241 aa28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 GRM1Q13255 1194 aa28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 FKBP5Q13451 457 aaPredicted RBP28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 DNAAF4Q8WXU2 420 aa28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 HHIPL1Q96JK4 782 aa28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 MED23Q9ULK4 1368 aa28.84■■■□□ 2.21
CDKN2A-208ENST00000498124 KIF4BQ2VIQ3 1234 aa28.83■■■□□ 2.21
CDKN2A-208ENST00000498124 RBM26Q5T8P6 1007 aaKnown RBP28.83■■■□□ 2.21
CDKN2A-208ENST00000498124 ZNF280AP59817 542 aaPredicted RBP28.82■■■□□ 2.2
CDKN2A-208ENST00000498124 RSBN1LQ6PCB5 846 aaPredicted RBP28.82■■■□□ 2.2
CDKN2A-208ENST00000498124 GMLQ99445 158 aa28.82■■■□□ 2.2
CDKN2A-208ENST00000498124 ASTN2O75129 1339 aaPredicted RBP28.82■■■□□ 2.2
CDKN2A-208ENST00000498124 ADM5C9JUS6 153 aa28.81■■■□□ 2.2
CDKN2A-208ENST00000498124 FAM161AQ3B820 660 aa28.81■■■□□ 2.2
CDKN2A-208ENST00000498124 KRT26Q7Z3Y9 468 aa28.81■■■□□ 2.2
CDKN2A-208ENST00000498124 LINS1Q8NG48 757 aa28.81■■■□□ 2.2
CDKN2A-208ENST00000498124 G3V3G9 751 aa28.8■■■□□ 2.2
CDKN2A-208ENST00000498124 DCAF8Q5TAQ9 597 aa28.8■■■□□ 2.2
CDKN2A-208ENST00000498124 AGBL3Q8NEM8 1001 aa28.8■■■□□ 2.2
CDKN2A-208ENST00000498124 CSF1RP07333 972 aa28.79■■■□□ 2.2
CDKN2A-208ENST00000498124 MAP2K2P36507 400 aa28.79■■■□□ 2.2
CDKN2A-208ENST00000498124 PODNQ7Z5L7 613 aa28.79■■■□□ 2.2
CDKN2A-208ENST00000498124 CCT4P50991 539 aaKnown RBP28.78■■■□□ 2.2
CDKN2A-208ENST00000498124 MYH16Q9H6N6 1097 aa28.78■■■□□ 2.2
CDKN2A-208ENST00000498124 GGA3Q9NZ52 723 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms