RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 DNAJC3Q13217 504 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 FAM69BQ5VUD6 431 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 PPP1R18Q6NYC8 613 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ARHGEF18Q6ZSZ5 1173 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ZNF605Q86T29 641 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 EHBP1Q8NDI1 1231 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 GLG1Q92896 1179 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 TRERF1Q96PN7 1200 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 CBX8Q9HC52 389 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 CYLDQ9NQC7 956 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 TSHZ2Q9NRE2 1034 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 DENND2AQ9ULE3 1009 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 NOB1Q9ULX3 412 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 ADAMTS5Q9UNA0 930 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 BAZ2BQ9UIF8 2168 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 MARF1Q9Y4F3 1742 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 GOLGA6L3A6NEY3 463 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 WNT7AO00755 349 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 KRT27Q7Z3Y8 459 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 THEMISQ8N1K5 641 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 SYTL4Q96C24 671 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 USB1Q9BQ65 265 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 ANP32EQ9BTT0 268 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 UBP1Q9NZI7 540 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 NCOR1O75376 2440 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 LCHNA4D1U4 455 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 KRT37O76014 449 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ARID4AP29374 1257 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 TRPC1P48995 793 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ZNF157P51786 506 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 VMACQ2NL98 169 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 TMEM259Q4ZIN3 620 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ZBTB41Q5SVQ8 909 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 RTF1Q92541 710 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 MRPS27Q92552 414 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 GJD4Q96KN9 370 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 NEUROD6Q96NK8 337 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 EYA1Q99502 592 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 MKNK1Q9BUB5 465 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 PELI2Q9HAT8 420 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 FAM13BQ9NYF5 915 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ANKFY1Q9P2R3 1169 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 DCCP43146 1447 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ZC3H13Q5T200 1668 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 PTPN23Q9H3S7 1636 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 SMIM22K7EJ46 135 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 STRNO43815 780 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 LUC7L3O95232 432 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 RLN2P04090 185 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 MS4A1P11836 297 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 SCP2P22307 547 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 CCDC152Q4G0S7 254 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ARSJQ5FYB0 599 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 SPRYD7Q5W111 196 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 FAM9AQ8IZU1 332 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.82□□□□□ -2.12
XRN1-214ENST00000498077 UTP4Q969X6 686 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 BCANQ96GW7 911 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 NLRP3Q96P20 1036 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ARXQ96QS3 562 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 INCENPQ9NQS7 918 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 TBC1D22BQ9NU19 505 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 KIF17Q9P2E2 1029 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 TRPC4Q9UBN4 977 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 ABCA4P78363 2273 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 LAMC1P11047 1609 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 BRD4O60885 1362 aaPredicted RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 GMNNO75496 209 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 MYCP01106 439 aaPredicted RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 GPD2P43304 727 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 PHKA2P46019 1235 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 TUSC1Q2TAM9 212 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 TJAP1Q5JTD0 557 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 ZBTB33Q86T24 672 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 CENPIQ92674 756 aaPredicted RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 CAMKK2Q96RR4 588 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 FHDC1Q9C0D6 1143 aaPredicted RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 TSKSQ9UJT2 592 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 A2MP01023 1474 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 TESPA1A2RU30 521 aaPredicted RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 TNNI2P48788 182 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 SMCPP49901 116 aaPredicted RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 NR5A1Q13285 461 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 NEUROD1Q13562 356 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 DCTN1Q14203 1278 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 RRS1Q15050 365 aaKnown RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 ZNF423Q2M1K9 1284 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 LINC01559Q495D7 138 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 NEK9Q8TD19 979 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 NCOR2Q9Y618 2525 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 PZPP20742 1482 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 PRDM15P57071 1507 aaPredicted RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 SIGLEC1Q9BZZ2 1709 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 SMG6Q86US8 1419 aaKnown RBP1.81□□□□□ -2.12
XRN1-214ENST00000498077 SLC15A1P46059 708 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 CCNG1P51959 295 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 NAGLUP54802 743 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 HNRNPUQ00839 825 aaKnown RBP eCLIP1.81□□□□□ -2.12
XRN1-214ENST00000498077 PTGDRQ13258 359 aa1.81□□□□□ -2.12
XRN1-214ENST00000498077 PTPRNQ16849 979 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms