RNA–Protein interactions for RNA: ENST00000497987.1

NUB1-211, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-211ENST00000497987 ABCC12Q96J65 1359 aa11.59□□□□□ -0.55
NUB1-211ENST00000497987 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
NUB1-211ENST00000497987 ELL2O00472 640 aaPredicted RBP11.59□□□□□ -0.55
NUB1-211ENST00000497987 NTSR2O95665 410 aa11.59□□□□□ -0.55
NUB1-211ENST00000497987 PPP1R42Q7Z4L9 355 aa11.59□□□□□ -0.55
NUB1-211ENST00000497987 VPS9D1Q9Y2B5 631 aa11.59□□□□□ -0.55
NUB1-211ENST00000497987 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 GLTPD2A6NH11 291 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 TOMM70O94826 608 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 HOXB7P09629 217 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 PTPN5P54829 565 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 GNAI1P63096 354 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 CRY2Q49AN0 593 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 PARP10Q53GL7 1025 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 TAOK3Q9H2K8 898 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 MRS2Q9HD23 443 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
NUB1-211ENST00000497987 HSPA6P17066 643 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
NUB1-211ENST00000497987 TCIRG1Q13488 830 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 CCDC93Q567U6 631 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 SOGA3Q5TF21 947 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
NUB1-211ENST00000497987 SYNE4Q8N205 404 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 C8orf58Q8NAV2 365 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 DDX12PQ92771 950 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
NUB1-211ENST00000497987 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
NUB1-211ENST00000497987 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
NUB1-211ENST00000497987 ZC3H4Q9UPT8 1303 aaKnown RBP11.57□□□□□ -0.56
NUB1-211ENST00000497987 TCERG1O14776 1098 aaKnown RBP11.56□□□□□ -0.56
NUB1-211ENST00000497987 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
NUB1-211ENST00000497987 FER1L6Q2WGJ9 1857 aa11.56□□□□□ -0.56
NUB1-211ENST00000497987 SLC10A5Q5PT55 438 aa11.56□□□□□ -0.56
NUB1-211ENST00000497987 NLRP10Q86W26 655 aa11.56□□□□□ -0.56
NUB1-211ENST00000497987 RPGRQ92834 1020 aaKnown RBP11.56□□□□□ -0.56
NUB1-211ENST00000497987 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
NUB1-211ENST00000497987 HYPKQ9NX55 129 aa11.56□□□□□ -0.56
NUB1-211ENST00000497987 IBTKQ9P2D0 1353 aaPredicted RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 CEP350Q5VT06 3117 aa11.55□□□□□ -0.56
NUB1-211ENST00000497987 POTECB2RU33 542 aa11.55□□□□□ -0.56
NUB1-211ENST00000497987 HCLS1P14317 486 aaPredicted RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUB1-211ENST00000497987 HSP90AB3PQ58FF7 597 aa11.55□□□□□ -0.56
NUB1-211ENST00000497987 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
NUB1-211ENST00000497987 SLC51AQ86UW1 340 aa11.55□□□□□ -0.56
NUB1-211ENST00000497987 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
NUB1-211ENST00000497987 PLBD2Q8NHP8 589 aa11.55□□□□□ -0.56
NUB1-211ENST00000497987 RBM46Q8TBY0 533 aaKnown RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 RBM17Q96I25 401 aaKnown RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 PHAXQ9H814 394 aaKnown RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 ZNF277Q9NRM2 450 aaPredicted RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 TRMT112Q9UI30 125 aaKnown RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 TNRC6CQ9HCJ0 1690 aaKnown RBP11.55□□□□□ -0.56
NUB1-211ENST00000497987 ATP5J2-PTCD1G3V325 749 aa11.54□□□□□ -0.56
NUB1-211ENST00000497987 RGS20O76081 388 aa11.54□□□□□ -0.56
NUB1-211ENST00000497987 DDNO94850 711 aaPredicted RBP11.54□□□□□ -0.56
NUB1-211ENST00000497987 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
NUB1-211ENST00000497987 TSPYL6Q8N831 410 aa11.54□□□□□ -0.56
NUB1-211ENST00000497987 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
NUB1-211ENST00000497987 CRAMP1Q96RY5 1269 aa11.54□□□□□ -0.56
NUB1-211ENST00000497987 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
NUB1-211ENST00000497987 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
NUB1-211ENST00000497987 CCDC27Q2M243 656 aa11.53□□□□□ -0.56
NUB1-211ENST00000497987 YTHDC1Q96MU7 727 aaKnown RBP11.53□□□□□ -0.56
NUB1-211ENST00000497987 ISCA1Q9BUE6 129 aa11.53□□□□□ -0.56
NUB1-211ENST00000497987 ARFGEF2Q9Y6D5 1785 aa11.53□□□□□ -0.56
NUB1-211ENST00000497987 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.56
NUB1-211ENST00000497987 FOSBP53539 338 aa11.52□□□□□ -0.57
NUB1-211ENST00000497987 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.57
NUB1-211ENST00000497987 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
NUB1-211ENST00000497987 PCDHGA10Q9Y5H3 936 aa11.52□□□□□ -0.57
NUB1-211ENST00000497987 SH3TC1Q8TE82 1336 aa11.52□□□□□ -0.57
NUB1-211ENST00000497987 DICER1Q9UPY3 1922 aaKnown RBP11.51□□□□□ -0.57
NUB1-211ENST00000497987 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
NUB1-211ENST00000497987 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
NUB1-211ENST00000497987 FSTL1Q12841 308 aa11.51□□□□□ -0.57
NUB1-211ENST00000497987 RTL5Q5HYW3 569 aaPredicted RBP11.51□□□□□ -0.57
NUB1-211ENST00000497987 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
NUB1-211ENST00000497987 CC2D2BQ6DHV5 1058 aa11.51□□□□□ -0.57
NUB1-211ENST00000497987 PSMD1Q99460 953 aa11.51□□□□□ -0.57
NUB1-211ENST00000497987 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
NUB1-211ENST00000497987 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
NUB1-211ENST00000497987 OSBPP22059 807 aa11.5□□□□□ -0.57
NUB1-211ENST00000497987 APLP1P51693 650 aa11.5□□□□□ -0.57
NUB1-211ENST00000497987 TRIM28Q13263 835 aaKnown RBP11.5□□□□□ -0.57
NUB1-211ENST00000497987 FAM9BQ8IZU0 186 aa11.5□□□□□ -0.57
NUB1-211ENST00000497987 ABCC4O15439 1325 aa11.5□□□□□ -0.57
NUB1-211ENST00000497987 BHMG1C9JSJ3 638 aaPredicted RBP11.49□□□□□ -0.57
NUB1-211ENST00000497987 BBOX1O75936 387 aa11.49□□□□□ -0.57
NUB1-211ENST00000497987 HTRA3P83110 453 aa11.49□□□□□ -0.57
NUB1-211ENST00000497987 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
NUB1-211ENST00000497987 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
NUB1-211ENST00000497987 ZNF454Q8N9F8 522 aa11.49□□□□□ -0.57
NUB1-211ENST00000497987 SMC1BQ8NDV3 1235 aa11.49□□□□□ -0.57
NUB1-211ENST00000497987 MYD88Q99836 296 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms