RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ABCC4O15439 1325 aa14.29□□□□□ -0.12
ERCC8-208ENST00000497892 LTBP3Q9NS15 1303 aa14.29□□□□□ -0.12
ERCC8-208ENST00000497892 COL4A1P02462 1669 aa14.29□□□□□ -0.12
ERCC8-208ENST00000497892 RIOK3O14730 519 aaKnown RBP14.28□□□□□ -0.12
ERCC8-208ENST00000497892 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
ERCC8-208ENST00000497892 BRPF1P55201 1214 aaPredicted RBP14.28□□□□□ -0.12
ERCC8-208ENST00000497892 RASSF7Q02833 373 aa14.28□□□□□ -0.12
ERCC8-208ENST00000497892 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
ERCC8-208ENST00000497892 DICER1Q9UPY3 1922 aaKnown RBP14.28□□□□□ -0.12
ERCC8-208ENST00000497892 H7C1W4 665 aa14.27□□□□□ -0.13
ERCC8-208ENST00000497892 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.13
ERCC8-208ENST00000497892 PDE8AO60658 829 aa14.27□□□□□ -0.13
ERCC8-208ENST00000497892 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
ERCC8-208ENST00000497892 UBE3BQ7Z3V4 1068 aa14.27□□□□□ -0.13
ERCC8-208ENST00000497892 JARID2Q92833 1246 aaPredicted RBP14.27□□□□□ -0.13
ERCC8-208ENST00000497892 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
ERCC8-208ENST00000497892 ST18O60284 1047 aa14.26□□□□□ -0.13
ERCC8-208ENST00000497892 CASP7P55210 303 aa14.26□□□□□ -0.13
ERCC8-208ENST00000497892 DPY19L2Q6NUT2 758 aa14.26□□□□□ -0.13
ERCC8-208ENST00000497892 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
ERCC8-208ENST00000497892 TAOK3Q9H2K8 898 aa14.26□□□□□ -0.13
ERCC8-208ENST00000497892 RTL9Q8NET4 1388 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 LTBP1Q14766 1721 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 BBOX1O75936 387 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 LMNB1P20700 586 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 PRELPP51888 382 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 CTSWP56202 376 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 GRAPQ13588 217 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 C9orf131Q5VYM1 1079 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 CC2D2BQ6DHV5 1058 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 SLC4A10Q6U841 1118 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
ERCC8-208ENST00000497892 SRCIN1Q9C0H9 1055 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 ATP6V0A2Q9Y487 856 aa14.25□□□□□ -0.13
ERCC8-208ENST00000497892 GRM8O00222 908 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 GRIPAP1Q4V328 841 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 TMC4Q7Z404 712 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 SLC51AQ86UW1 340 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 RTKN2Q8IZC4 609 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 RNF181Q9P0P0 153 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 DUOX1Q9NRD9 1551 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 SPEF2Q9C093 1822 aa14.24□□□□□ -0.13
ERCC8-208ENST00000497892 ZC3H4Q9UPT8 1303 aaKnown RBP14.23□□□□□ -0.13
ERCC8-208ENST00000497892 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
ERCC8-208ENST00000497892 ZNF784Q8NCA9 323 aaPredicted RBP14.23□□□□□ -0.13
ERCC8-208ENST00000497892 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
ERCC8-208ENST00000497892 NOB1Q9ULX3 412 aaKnown RBP14.23□□□□□ -0.13
ERCC8-208ENST00000497892 SNPHO15079 494 aa14.22□□□□□ -0.13
ERCC8-208ENST00000497892 SP8Q8IXZ3 490 aa14.22□□□□□ -0.13
ERCC8-208ENST00000497892 EFCAB3Q8N7B9 438 aa14.22□□□□□ -0.13
ERCC8-208ENST00000497892 TTLL11Q8NHH1 800 aa14.22□□□□□ -0.13
ERCC8-208ENST00000497892 PSMD1Q99460 953 aa14.22□□□□□ -0.13
ERCC8-208ENST00000497892 API5Q9BZZ5 524 aaKnown RBP14.22□□□□□ -0.13
ERCC8-208ENST00000497892 UTYO14607 1347 aa14.21□□□□□ -0.13
ERCC8-208ENST00000497892 ARHGAP45Q92619 1136 aa14.21□□□□□ -0.13
ERCC8-208ENST00000497892 CCDC85AQ96PX6 553 aaPredicted RBP14.21□□□□□ -0.13
ERCC8-208ENST00000497892 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.13
ERCC8-208ENST00000497892 SEC31BQ9NQW1 1179 aa14.21□□□□□ -0.13
ERCC8-208ENST00000497892 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.13
ERCC8-208ENST00000497892 BCAR3O75815 825 aa14.2□□□□□ -0.14
ERCC8-208ENST00000497892 CSF1RP07333 972 aa14.2□□□□□ -0.14
ERCC8-208ENST00000497892 CCT4P50991 539 aaKnown RBP14.2□□□□□ -0.14
ERCC8-208ENST00000497892 RPS8P62241 208 aaKnown RBP14.2□□□□□ -0.14
ERCC8-208ENST00000497892 GREM2Q9H772 168 aa14.2□□□□□ -0.14
ERCC8-208ENST00000497892 COL4A5P29400 1685 aa14.2□□□□□ -0.14
ERCC8-208ENST00000497892 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
ERCC8-208ENST00000497892 NBPF7P0C2Y1 421 aaPredicted RBP14.19□□□□□ -0.14
ERCC8-208ENST00000497892 FOXO4P98177 505 aa14.19□□□□□ -0.14
ERCC8-208ENST00000497892 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
ERCC8-208ENST00000497892 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
ERCC8-208ENST00000497892 CDC5LQ99459 802 aaKnown RBP14.19□□□□□ -0.14
ERCC8-208ENST00000497892 ZNF277Q9NRM2 450 aaPredicted RBP14.19□□□□□ -0.14
ERCC8-208ENST00000497892 BOLA1Q9Y3E2 137 aa14.19□□□□□ -0.14
ERCC8-208ENST00000497892 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
ERCC8-208ENST00000497892 IPO8O15397 1037 aaKnown RBP14.18□□□□□ -0.14
ERCC8-208ENST00000497892 IARSP41252 1262 aaKnown RBP14.18□□□□□ -0.14
ERCC8-208ENST00000497892 DPP8Q6V1X1 898 aaPredicted RBP14.18□□□□□ -0.14
ERCC8-208ENST00000497892 RTFDC1Q9BY42 306 aaPredicted RBP14.18□□□□□ -0.14
ERCC8-208ENST00000497892 TRIM27P14373 513 aa14.17□□□□□ -0.14
ERCC8-208ENST00000497892 EPHA10Q5JZY3 1008 aa14.17□□□□□ -0.14
ERCC8-208ENST00000497892 ATF7IPQ6VMQ6 1270 aa14.17□□□□□ -0.14
ERCC8-208ENST00000497892 ANKRD18AQ8IVF6 992 aa14.17□□□□□ -0.14
ERCC8-208ENST00000497892 MPNDQ8N594 471 aa14.17□□□□□ -0.14
ERCC8-208ENST00000497892 KAZALD1Q96I82 304 aa14.17□□□□□ -0.14
ERCC8-208ENST00000497892 TMEM121BQ9BXQ6 578 aaPredicted RBP14.17□□□□□ -0.14
ERCC8-208ENST00000497892 USP44Q9H0E7 712 aa14.17□□□□□ -0.14
ERCC8-208ENST00000497892 ITGA6P23229 1130 aa14.16□□□□□ -0.14
ERCC8-208ENST00000497892 INTS3Q68E01 1043 aaKnown RBP14.16□□□□□ -0.14
ERCC8-208ENST00000497892 SUPT20HQ8NEM7 779 aa14.16□□□□□ -0.14
ERCC8-208ENST00000497892 ZNF526Q8TF50 670 aaPredicted RBP14.16□□□□□ -0.14
ERCC8-208ENST00000497892 FRAT1Q92837 279 aaPredicted RBP14.16□□□□□ -0.14
ERCC8-208ENST00000497892 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
ERCC8-208ENST00000497892 GPBP1L1Q9HC44 474 aaPredicted RBP14.16□□□□□ -0.14
ERCC8-208ENST00000497892 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.14
ERCC8-208ENST00000497892 GPSM2P81274 684 aa14.15□□□□□ -0.14
ERCC8-208ENST00000497892 RABL6Q3YEC7 729 aaPredicted RBP14.15□□□□□ -0.14
ERCC8-208ENST00000497892 ZKSCAN2Q63HK3 967 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms