RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 PODXL2Q9NZ53 605 aa14.75□□□□□ -0.05
MRPL55-234ENST00000497758 HDAC5Q9UQL6 1122 aa14.75□□□□□ -0.05
MRPL55-234ENST00000497758 FZD9O00144 591 aa14.74□□□□□ -0.05
MRPL55-234ENST00000497758 INTS3Q68E01 1043 aaKnown RBP14.74□□□□□ -0.05
MRPL55-234ENST00000497758 FTSJ3Q8IY81 847 aaKnown RBP14.74□□□□□ -0.05
MRPL55-234ENST00000497758 TBC1D16Q8TBP0 767 aa14.74□□□□□ -0.05
MRPL55-234ENST00000497758 CLUAP1Q96AJ1 413 aa14.74□□□□□ -0.05
MRPL55-234ENST00000497758 RRAGCQ9HB90 399 aa14.74□□□□□ -0.05
MRPL55-234ENST00000497758 POLLQ9UGP5 575 aa14.74□□□□□ -0.05
MRPL55-234ENST00000497758 ZNF541Q9H0D2 1346 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 G3V3G9 751 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 DDNO94850 711 aaPredicted RBP14.73□□□□□ -0.05
MRPL55-234ENST00000497758 DCAF8Q5TAQ9 597 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 KAZALD1Q96I82 304 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 ZC3H12CQ9C0D7 883 aaKnown RBP14.73□□□□□ -0.05
MRPL55-234ENST00000497758 ANKRD2Q9GZV1 360 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 ZNRF3Q9ULT6 936 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 MINPP1Q9UNW1 487 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 DUOX1Q9NRD9 1551 aa14.73□□□□□ -0.05
MRPL55-234ENST00000497758 VEGFAP15692 232 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-234ENST00000497758 ATP2B4P23634 1241 aa14.72□□□□□ -0.05
MRPL55-234ENST00000497758 KCNJ4P48050 445 aa14.72□□□□□ -0.05
MRPL55-234ENST00000497758 GPC2Q8N158 579 aa14.72□□□□□ -0.05
MRPL55-234ENST00000497758 GPR101Q96P66 508 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-234ENST00000497758 CNNM1Q9NRU3 951 aa14.72□□□□□ -0.05
MRPL55-234ENST00000497758 GJA3Q9Y6H8 435 aa14.72□□□□□ -0.05
MRPL55-234ENST00000497758 COL4A5P29400 1685 aa14.71□□□□□ -0.05
MRPL55-234ENST00000497758 KIF3CO14782 793 aa14.71□□□□□ -0.05
MRPL55-234ENST00000497758 GNAI3P08754 354 aa14.71□□□□□ -0.05
MRPL55-234ENST00000497758 RABL6Q3YEC7 729 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-234ENST00000497758 LDHAL6AQ6ZMR3 332 aa14.71□□□□□ -0.05
MRPL55-234ENST00000497758 ANKRD44Q8N8A2 993 aa14.71□□□□□ -0.05
MRPL55-234ENST00000497758 ZNF594Q96JF6 807 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-234ENST00000497758 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.05
MRPL55-234ENST00000497758 SPEF2Q9C093 1822 aa14.71□□□□□ -0.06
MRPL55-234ENST00000497758 IQCA1LA6NCM1 817 aa14.7□□□□□ -0.06
MRPL55-234ENST00000497758 CHRNDQ07001 517 aa14.7□□□□□ -0.06
MRPL55-234ENST00000497758 DZIP1LQ8IYY4 767 aaKnown RBP14.7□□□□□ -0.06
MRPL55-234ENST00000497758 MEIS3Q99687 375 aa14.7□□□□□ -0.06
MRPL55-234ENST00000497758 TNNQ9UQP3 1299 aa14.7□□□□□ -0.06
MRPL55-234ENST00000497758 LEMD3Q9Y2U8 911 aa14.7□□□□□ -0.06
MRPL55-234ENST00000497758 ECE2O60344 883 aa14.69□□□□□ -0.06
MRPL55-234ENST00000497758 TNIP1Q15025 636 aa14.69□□□□□ -0.06
MRPL55-234ENST00000497758 DOK7Q18PE1 504 aa14.69□□□□□ -0.06
MRPL55-234ENST00000497758 CIAPIN1Q6FI81 312 aa14.69□□□□□ -0.06
MRPL55-234ENST00000497758 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
MRPL55-234ENST00000497758 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-234ENST00000497758 DBNDD1Q9H9R9 158 aa14.69□□□□□ -0.06
MRPL55-234ENST00000497758 LRRFIP2Q9Y608 721 aaKnown RBP14.69□□□□□ -0.06
MRPL55-234ENST00000497758 LTBP1Q14766 1721 aa14.69□□□□□ -0.06
MRPL55-234ENST00000497758 ZNF804BA4D1E1 1349 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 RAD17O75943 681 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 TOMM70O94826 608 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 MS4A1P11836 297 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 LMOD1P29536 600 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-234ENST00000497758 C1QTNF8P60827 252 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 CXCL9Q07325 125 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 ITPRIPQ8IWB1 547 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 WDR90Q96KV7 1748 aa14.68□□□□□ -0.06
MRPL55-234ENST00000497758 PLIN1O60240 522 aa14.67□□□□□ -0.06
MRPL55-234ENST00000497758 HELBQ8NG08 1087 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-234ENST00000497758 HACL1Q9UJ83 578 aa14.67□□□□□ -0.06
MRPL55-234ENST00000497758 MED23Q9ULK4 1368 aa14.67□□□□□ -0.06
MRPL55-234ENST00000497758 YDJCA8MPS7 323 aa14.66□□□□□ -0.06
MRPL55-234ENST00000497758 TAF5LO75529 589 aa14.66□□□□□ -0.06
MRPL55-234ENST00000497758 GNAI2P04899 355 aa14.66□□□□□ -0.06
MRPL55-234ENST00000497758 RBM46Q8TBY0 533 aaKnown RBP14.66□□□□□ -0.06
MRPL55-234ENST00000497758 MROH5Q6ZUA9 1318 aa14.66□□□□□ -0.06
MRPL55-234ENST00000497758 WTIPA6NIX2 430 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-234ENST00000497758 POTECB2RU33 542 aa14.65□□□□□ -0.06
MRPL55-234ENST00000497758 RLBP1P12271 317 aa14.65□□□□□ -0.06
MRPL55-234ENST00000497758 METTL24Q5JXM2 366 aa14.65□□□□□ -0.06
MRPL55-234ENST00000497758 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-234ENST00000497758 KLHDC4Q8TBB5 520 aa14.65□□□□□ -0.06
MRPL55-234ENST00000497758 PUS3Q9BZE2 481 aaKnown RBP14.65□□□□□ -0.06
MRPL55-234ENST00000497758 TAF1DQ9H5J8 278 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-234ENST00000497758 PSMD14O00487 310 aa14.64□□□□□ -0.07
MRPL55-234ENST00000497758 EPHX2P34913 555 aa14.64□□□□□ -0.07
MRPL55-234ENST00000497758 GMPSP49915 693 aaPredicted RBP14.64□□□□□ -0.07
MRPL55-234ENST00000497758 EAPPQ56P03 285 aaPredicted RBP14.64□□□□□ -0.07
MRPL55-234ENST00000497758 PODNQ7Z5L7 613 aa14.64□□□□□ -0.07
MRPL55-234ENST00000497758 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
MRPL55-234ENST00000497758 PANK1Q8TE04 598 aa14.64□□□□□ -0.07
MRPL55-234ENST00000497758 RIPOR2Q9Y4F9 1068 aa14.64□□□□□ -0.07
MRPL55-234ENST00000497758 SRGAP3O43295 1099 aa14.63□□□□□ -0.07
MRPL55-234ENST00000497758 KLRK1P26718 216 aa14.63□□□□□ -0.07
MRPL55-234ENST00000497758 SCNN1DP51172 638 aa14.63□□□□□ -0.07
MRPL55-234ENST00000497758 LRRC24Q50LG9 513 aa14.63□□□□□ -0.07
MRPL55-234ENST00000497758 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
MRPL55-234ENST00000497758 PNMA8AQ86V59 439 aaPredicted RBP14.63□□□□□ -0.07
MRPL55-234ENST00000497758 COA1Q9GZY4 146 aa14.63□□□□□ -0.07
MRPL55-234ENST00000497758 SIL1Q9H173 461 aa14.63□□□□□ -0.07
MRPL55-234ENST00000497758 SCN4AP35499 1836 aa14.62□□□□□ -0.07
MRPL55-234ENST00000497758 SNAP23O00161 211 aa14.62□□□□□ -0.07
MRPL55-234ENST00000497758 EYA2O00167 538 aa14.62□□□□□ -0.07
MRPL55-234ENST00000497758 RFX5P48382 616 aaPredicted RBP14.62□□□□□ -0.07
MRPL55-234ENST00000497758 PTPN12Q05209 780 aaKnown RBP14.62□□□□□ -0.07
MRPL55-234ENST00000497758 FSTL1Q12841 308 aa14.62□□□□□ -0.07
MRPL55-234ENST00000497758 UBE4AQ14139 1066 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms