RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 GTF2E1P29083 439 aaPredicted RBP24.61■■□□□ 1.53
ACTN4-208ENST00000497637 ZC3H15Q8WU90 426 aaKnown RBP24.61■■□□□ 1.53
ACTN4-208ENST00000497637 NUCB1Q02818 461 aa24.6■■□□□ 1.53
ACTN4-208ENST00000497637 PDIA6Q15084 440 aa24.6■■□□□ 1.53
ACTN4-208ENST00000497637 NIM1KQ8IY84 436 aa24.6■■□□□ 1.53
ACTN4-208ENST00000497637 DNAAF4Q8WXU2 420 aa24.6■■□□□ 1.53
ACTN4-208ENST00000497637 PGAP2Q9UHJ9 254 aa24.6■■□□□ 1.53
ACTN4-208ENST00000497637 SNED1Q8TER0 1413 aa24.6■■□□□ 1.53
ACTN4-208ENST00000497637 ANXA1P04083 346 aa24.59■■□□□ 1.53
ACTN4-208ENST00000497637 PROSER3Q2NL68 480 aa24.59■■□□□ 1.53
ACTN4-208ENST00000497637 CRY2Q49AN0 593 aa24.59■■□□□ 1.53
ACTN4-208ENST00000497637 CEP85Q6P2H3 762 aa24.59■■□□□ 1.53
ACTN4-208ENST00000497637 VPS33BQ9H267 617 aa24.58■■□□□ 1.53
ACTN4-208ENST00000497637 GNAI2P04899 355 aa24.57■■□□□ 1.52
ACTN4-208ENST00000497637 KSR2Q6VAB6 950 aa24.57■■□□□ 1.52
ACTN4-208ENST00000497637 CDC37L1Q7L3B6 337 aa24.57■■□□□ 1.52
ACTN4-208ENST00000497637 GLIS2Q9BZE0 524 aaPredicted RBP24.57■■□□□ 1.52
ACTN4-208ENST00000497637 SRCIN1Q9C0H9 1055 aa24.57■■□□□ 1.52
ACTN4-208ENST00000497637 DCTPP1Q9H773 170 aa24.57■■□□□ 1.52
ACTN4-208ENST00000497637 PI4KAP2A4QPH2 592 aa24.56■■□□□ 1.52
ACTN4-208ENST00000497637 BEND3Q5T5X7 828 aa24.56■■□□□ 1.52
ACTN4-208ENST00000497637 NBPF15Q8N660 670 aa24.56■■□□□ 1.52
ACTN4-208ENST00000497637 PI4KAP1Q8N8J0 262 aa24.56■■□□□ 1.52
ACTN4-208ENST00000497637 ZNF408Q9H9D4 720 aa24.56■■□□□ 1.52
ACTN4-208ENST00000497637 USP16Q9Y5T5 823 aa24.56■■□□□ 1.52
ACTN4-208ENST00000497637 BCORQ6W2J9 1755 aa24.55■■□□□ 1.52
ACTN4-208ENST00000497637 DDX58O95786 925 aaKnown RBP24.55■■□□□ 1.52
ACTN4-208ENST00000497637 NYXQ9GZU5 481 aa24.55■■□□□ 1.52
ACTN4-208ENST00000497637 USP44Q9H0E7 712 aa24.55■■□□□ 1.52
ACTN4-208ENST00000497637 ERBB4Q15303 1308 aa24.55■■□□□ 1.52
ACTN4-208ENST00000497637 ALDH1L1O75891 902 aa24.54■■□□□ 1.52
ACTN4-208ENST00000497637 HOXA10P31260 410 aaPredicted RBP24.54■■□□□ 1.52
ACTN4-208ENST00000497637 HUNKP57058 714 aa24.54■■□□□ 1.52
ACTN4-208ENST00000497637 CHD1LQ86WJ1 897 aa24.54■■□□□ 1.52
ACTN4-208ENST00000497637 RPGRQ92834 1020 aaKnown RBP24.54■■□□□ 1.52
ACTN4-208ENST00000497637 CDHR2Q9BYE9 1310 aa24.54■■□□□ 1.52
ACTN4-208ENST00000497637 COL4A5P29400 1685 aa24.53■■□□□ 1.52
ACTN4-208ENST00000497637 FAM177BA6PVY3 158 aa24.53■■□□□ 1.52
ACTN4-208ENST00000497637 HMMRO75330 724 aa24.53■■□□□ 1.52
ACTN4-208ENST00000497637 CCDC102AQ96A19 550 aa24.53■■□□□ 1.52
ACTN4-208ENST00000497637 TMX4Q9H1E5 349 aaPredicted RBP24.53■■□□□ 1.52
ACTN4-208ENST00000497637 CTU1Q7Z7A3 348 aaKnown RBP24.52■■□□□ 1.52
ACTN4-208ENST00000497637 PPIP5K2O43314 1243 aa24.51■■□□□ 1.51
ACTN4-208ENST00000497637 C8orf34Q49A92 452 aa24.51■■□□□ 1.51
ACTN4-208ENST00000497637 LRP10Q7Z4F1 713 aa24.51■■□□□ 1.51
ACTN4-208ENST00000497637 ZIC5Q96T25 663 aa24.51■■□□□ 1.51
ACTN4-208ENST00000497637 ZNRF3Q9ULT6 936 aa24.51■■□□□ 1.51
ACTN4-208ENST00000497637 MAP3K2Q9Y2U5 619 aa24.51■■□□□ 1.51
ACTN4-208ENST00000497637 ATP8B2P98198 1209 aa24.5■■□□□ 1.51
ACTN4-208ENST00000497637 ANKRD45Q5TZF3 282 aa24.5■■□□□ 1.51
ACTN4-208ENST00000497637 IBTKQ9P2D0 1353 aaPredicted RBP24.5■■□□□ 1.51
ACTN4-208ENST00000497637 UBTFL1P0CB47 393 aaPredicted RBP24.49■■□□□ 1.51
ACTN4-208ENST00000497637 PIP4K2AP48426 406 aaPredicted RBP24.49■■□□□ 1.51
ACTN4-208ENST00000497637 GMPSP49915 693 aaPredicted RBP24.49■■□□□ 1.51
ACTN4-208ENST00000497637 CXCL9Q07325 125 aa24.49■■□□□ 1.51
ACTN4-208ENST00000497637 RGMBQ6NW40 437 aa24.49■■□□□ 1.51
ACTN4-208ENST00000497637 CRAMP1Q96RY5 1269 aa24.49■■□□□ 1.51
ACTN4-208ENST00000497637 PKN2Q16513 984 aaKnown RBP24.48■■□□□ 1.51
ACTN4-208ENST00000497637 XAGE3Q8WTP9 111 aa24.48■■□□□ 1.51
ACTN4-208ENST00000497637 RBM17Q96I25 401 aaKnown RBP24.48■■□□□ 1.51
ACTN4-208ENST00000497637 RNF186Q9NXI6 227 aa24.48■■□□□ 1.51
ACTN4-208ENST00000497637 TRPA1O75762 1119 aa24.47■■□□□ 1.51
ACTN4-208ENST00000497637 COPS6Q7L5N1 327 aa24.47■■□□□ 1.51
ACTN4-208ENST00000497637 SUPT20HQ8NEM7 779 aa24.47■■□□□ 1.51
ACTN4-208ENST00000497637 LINS1Q8NG48 757 aa24.47■■□□□ 1.51
ACTN4-208ENST00000497637 LNPKQ9C0E8 428 aa24.47■■□□□ 1.51
ACTN4-208ENST00000497637 FAM155AB1AL88 458 aaPredicted RBP24.46■■□□□ 1.51
ACTN4-208ENST00000497637 PPEF1O14829 653 aaPredicted RBP24.46■■□□□ 1.51
ACTN4-208ENST00000497637 MYL6BP14649 208 aa24.46■■□□□ 1.51
ACTN4-208ENST00000497637 TNIP1Q15025 636 aa24.46■■□□□ 1.51
ACTN4-208ENST00000497637 REM2Q8IYK8 340 aaPredicted RBP24.46■■□□□ 1.51
ACTN4-208ENST00000497637 HDAC5Q9UQL6 1122 aa24.46■■□□□ 1.51
ACTN4-208ENST00000497637 LRRFIP2Q9Y608 721 aaKnown RBP24.46■■□□□ 1.51
ACTN4-208ENST00000497637 KIF23Q02241 960 aaPredicted RBP24.45■■□□□ 1.5
ACTN4-208ENST00000497637 AIMP1Q12904 312 aaKnown RBP24.45■■□□□ 1.5
ACTN4-208ENST00000497637 AOC3Q16853 763 aa24.45■■□□□ 1.5
ACTN4-208ENST00000497637 C2orf69Q8N8R5 385 aa24.45■■□□□ 1.5
ACTN4-208ENST00000497637 HIRAP54198 1017 aaPredicted RBP24.44■■□□□ 1.5
ACTN4-208ENST00000497637 RIC3Q7Z5B4 369 aa24.44■■□□□ 1.5
ACTN4-208ENST00000497637 NBPF26B4DH59 902 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 H7C1D1 291 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 HLFQ16534 295 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 NBPF10Q6P3W6 841 aaKnown RBP24.43■■□□□ 1.5
ACTN4-208ENST00000497637 ANKRD13DQ6ZTN6 518 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 USP48Q86UV5 1035 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 METTL22Q9BUU2 404 aaPredicted RBP24.43■■□□□ 1.5
ACTN4-208ENST00000497637 HPS5Q9UPZ3 1129 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 LAMB4A4D0S4 1761 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 RIC1Q4ADV7 1423 aa24.43■■□□□ 1.5
ACTN4-208ENST00000497637 ZNF157P51786 506 aaPredicted RBP24.42■■□□□ 1.5
ACTN4-208ENST00000497637 NUTM1Q86Y26 1132 aa24.42■■□□□ 1.5
ACTN4-208ENST00000497637 GBA2Q9HCG7 927 aaPredicted RBP24.42■■□□□ 1.5
ACTN4-208ENST00000497637 ABCC12Q96J65 1359 aa24.42■■□□□ 1.5
ACTN4-208ENST00000497637 UTYO14607 1347 aa24.41■■□□□ 1.5
ACTN4-208ENST00000497637 ERVV-1B6SEH8 477 aa24.41■■□□□ 1.5
ACTN4-208ENST00000497637 RTFDC1Q9BY42 306 aaPredicted RBP24.41■■□□□ 1.5
ACTN4-208ENST00000497637 ATP6V0A2Q9Y487 856 aa24.41■■□□□ 1.5
ACTN4-208ENST00000497637 NBPF7P0C2Y1 421 aaPredicted RBP24.4■■□□□ 1.5
ACTN4-208ENST00000497637 NEXNQ0ZGT2 675 aa24.4■■□□□ 1.5
ACTN4-208ENST00000497637 PLBD2Q8NHP8 589 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms