RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 G3BP1Q13283 466 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 ANKRD1Q15327 319 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 LRRFIP1Q32MZ4 808 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 TXNDC2Q86VQ3 553 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 FBXO18Q8NFZ0 1043 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 GOLGA5Q8TBA6 731 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 IRX2Q9BZI1 471 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 CTAGE5O15320 804 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 LIG3P49916 1009 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 DNAJC21Q5F1R6 531 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 SYNE3Q6ZMZ3 975 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 PI4K2BQ8TCG2 481 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 DNAAF4Q8WXU2 420 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 ZNF396Q96N95 335 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 SLC26A8Q96RN1 970 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 TBC1D8O95759 1140 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 ADKP55263 362 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 MYCBPQ99417 103 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 CENPHQ9H3R5 247 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 APOBRQ0VD83 1088 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 KNDC1Q76NI1 1749 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 SIRT1Q96EB6 747 aa12.28□□□□□ -0.44
TRAPPC12-223ENST00000497597 A0A0D9SFI3 127 aa12.27□□□□□ -0.44
TRAPPC12-223ENST00000497597 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.44
TRAPPC12-223ENST00000497597 H3BQF6 201 aa12.27□□□□□ -0.44
TRAPPC12-223ENST00000497597 ZSCAN12O43309 604 aa12.27□□□□□ -0.44
TRAPPC12-223ENST00000497597 PACS2Q86VP3 889 aa12.27□□□□□ -0.44
TRAPPC12-223ENST00000497597 WDR24Q96S15 920 aa12.27□□□□□ -0.44
TRAPPC12-223ENST00000497597 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.44
TRAPPC12-223ENST00000497597 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 TADA3O75528 432 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 WDHD1O75717 1129 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 EIF3JO75822 258 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 CAVIN2O95810 425 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 TPM1P09493 284 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 MTX1Q13505 466 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 MTHFSDQ2M296 383 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 MRPS27Q92552 414 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 GOLGA1Q92805 767 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 DHX58Q96C10 678 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 CCP110O43303 1012 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 FAM160A1Q05DH4 1040 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 BANK1Q8NDB2 785 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 ELP1O95163 1332 aa12.27□□□□□ -0.45
TRAPPC12-223ENST00000497597 NEO1Q92859 1461 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 CHGBP05060 677 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 CDC25BP30305 580 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 LONRF3Q496Y0 759 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 BICC1Q9H694 974 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 SSH2Q76I76 1423 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 IQGAP3Q86VI3 1631 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 EFCAB8A8MWE9 144 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 TFRCP02786 760 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 IVLP07476 585 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 RPS6KB1P23443 525 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 NEK1Q96PY6 1258 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 TSPOAP1O95153 1857 aa12.26□□□□□ -0.45
TRAPPC12-223ENST00000497597 TMEM232C9JQI7 657 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 NDUFA8P51970 172 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 KLHL10Q6JEL2 608 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 OLFM4Q6UX06 510 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 PTPDC1A2A3K4 754 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 CPLX1O14810 134 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 CTR9Q6PD62 1173 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 ERC1Q8IUD2 1116 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 DPF2Q92785 391 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 GJB4Q9NTQ9 266 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 ERLIN1O75477 346 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 HSP90AB3PQ58FF7 597 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 TTC19Q6DKK2 380 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 L2HGDHQ9H9P8 463 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 RAI14Q9P0K7 980 aa12.25□□□□□ -0.45
TRAPPC12-223ENST00000497597 SARM1Q6SZW1 724 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 PPP2R2CQ9Y2T4 447 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 TRPM2O94759 1503 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 TTC21AQ8NDW8 1320 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 CHMP4BP1P59074 171 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 RESTQ13127 1097 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 NBPF11Q86T75 865 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 ZNF589Q86UQ0 364 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 CNNM3Q8NE01 707 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 FAM53CQ9NYF3 392 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 UNC13BO14795 1591 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 ZRANB2O95218 330 aaKnown RBP eCLIP12.24□□□□□ -0.452e-6■□□□□ 11.2
TRAPPC12-223ENST00000497597 GPR161Q8N6U8 529 aaKnown RBP12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 EVI5LQ96CN4 794 aa12.24□□□□□ -0.45
TRAPPC12-223ENST00000497597 KIF24Q5T7B8 1368 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 537.1 ms