RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
TOM1-217ENST00000497448 NLRP10Q86W26 655 aa13.85□□□□□ -0.19
TOM1-217ENST00000497448 CFHR5Q9BXR6 569 aa13.85□□□□□ -0.19
TOM1-217ENST00000497448 R3HDMLQ9H3Y0 253 aa13.85□□□□□ -0.19
TOM1-217ENST00000497448 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
TOM1-217ENST00000497448 UBE2Q2LH0YL09 131 aa13.84□□□□□ -0.19
TOM1-217ENST00000497448 C6orf229H3BNL8 230 aa13.84□□□□□ -0.19
TOM1-217ENST00000497448 VIL1P09327 827 aaKnown RBP13.84□□□□□ -0.19
TOM1-217ENST00000497448 ZNF280AP59817 542 aaPredicted RBP13.84□□□□□ -0.19
TOM1-217ENST00000497448 GPSM2P81274 684 aa13.84□□□□□ -0.19
TOM1-217ENST00000497448 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
TOM1-217ENST00000497448 SCARF1Q14162 830 aa13.84□□□□□ -0.19
TOM1-217ENST00000497448 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
TOM1-217ENST00000497448 CELF1Q92879 486 aaKnown RBP13.84□□□□□ -0.19
TOM1-217ENST00000497448 CFAP53Q96M91 514 aa13.84□□□□□ -0.19
TOM1-217ENST00000497448 SCAF8Q9UPN6 1271 aaKnown RBP13.84□□□□□ -0.19
TOM1-217ENST00000497448 ZNF646O15015 1829 aaPredicted RBP13.84□□□□□ -0.19
TOM1-217ENST00000497448 SH3TC1Q8TE82 1336 aa13.84□□□□□ -0.19
TOM1-217ENST00000497448 PITPNM2Q9BZ72 1349 aa13.84□□□□□ -0.19
TOM1-217ENST00000497448 KIAA0100Q14667 2235 aaKnown RBP13.83□□□□□ -0.2
TOM1-217ENST00000497448 PDIA6Q15084 440 aa13.83□□□□□ -0.2
TOM1-217ENST00000497448 PROSER3Q2NL68 480 aa13.83□□□□□ -0.2
TOM1-217ENST00000497448 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
TOM1-217ENST00000497448 EYA3Q99504 573 aa13.83□□□□□ -0.2
TOM1-217ENST00000497448 COLQQ9Y215 455 aaPredicted RBP13.83□□□□□ -0.2
TOM1-217ENST00000497448 NUDCQ9Y266 331 aa13.83□□□□□ -0.2
TOM1-217ENST00000497448 ANXA1P04083 346 aa13.82□□□□□ -0.2
TOM1-217ENST00000497448 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
TOM1-217ENST00000497448 TRMT112Q9UI30 125 aaKnown RBP13.82□□□□□ -0.2
TOM1-217ENST00000497448 TRIM17Q9Y577 477 aa13.82□□□□□ -0.2
TOM1-217ENST00000497448 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
TOM1-217ENST00000497448 PRAMEF18Q5VWM3 479 aa13.81□□□□□ -0.2
TOM1-217ENST00000497448 OTOP1Q7RTM1 612 aa13.81□□□□□ -0.2
TOM1-217ENST00000497448 TBC1D16Q8TBP0 767 aa13.81□□□□□ -0.2
TOM1-217ENST00000497448 EN2P19622 333 aaPredicted RBP13.8□□□□□ -0.2
TOM1-217ENST00000497448 TTLL12Q14166 644 aaPredicted RBP13.8□□□□□ -0.2
TOM1-217ENST00000497448 RSBN1LQ6PCB5 846 aaPredicted RBP13.8□□□□□ -0.2
TOM1-217ENST00000497448 AGBL3Q8NEM8 1001 aa13.8□□□□□ -0.2
TOM1-217ENST00000497448 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
TOM1-217ENST00000497448 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
TOM1-217ENST00000497448 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
TOM1-217ENST00000497448 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
TOM1-217ENST00000497448 GMLQ99445 158 aa13.79□□□□□ -0.2
TOM1-217ENST00000497448 TRIOBPQ9H2D6 2365 aa13.79□□□□□ -0.2
TOM1-217ENST00000497448 EIF2S2P20042 333 aaKnown RBP13.78□□□□□ -0.2
TOM1-217ENST00000497448 TCIRG1Q13488 830 aa13.78□□□□□ -0.2
TOM1-217ENST00000497448 ARMC5Q96C12 935 aa13.78□□□□□ -0.2
TOM1-217ENST00000497448 DLL1O00548 723 aa13.77□□□□□ -0.21
TOM1-217ENST00000497448 UFL1O94874 794 aa13.77□□□□□ -0.21
TOM1-217ENST00000497448 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
TOM1-217ENST00000497448 PTPN12Q05209 780 aaKnown RBP13.77□□□□□ -0.21
TOM1-217ENST00000497448 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
TOM1-217ENST00000497448 SF3B3Q15393 1217 aaKnown RBP13.77□□□□□ -0.21
TOM1-217ENST00000497448 COPS6Q7L5N1 327 aa13.77□□□□□ -0.21
TOM1-217ENST00000497448 XAGE3Q8WTP9 111 aa13.77□□□□□ -0.21
TOM1-217ENST00000497448 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
TOM1-217ENST00000497448 COL6A3P12111 3177 aa13.76□□□□□ -0.21
TOM1-217ENST00000497448 ALDH1A1P00352 501 aa13.76□□□□□ -0.21
TOM1-217ENST00000497448 NBPF9Q3BBW0 867 aa13.76□□□□□ -0.21
TOM1-217ENST00000497448 SPRYD7Q5W111 196 aa13.76□□□□□ -0.21
TOM1-217ENST00000497448 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
TOM1-217ENST00000497448 PODXL2Q9NZ53 605 aa13.76□□□□□ -0.21
TOM1-217ENST00000497448 PTPN22Q9Y2R2 807 aa13.76□□□□□ -0.21
TOM1-217ENST00000497448 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
TOM1-217ENST00000497448 G3V3G9 751 aa13.75□□□□□ -0.21
TOM1-217ENST00000497448 NF2P35240 595 aa13.75□□□□□ -0.21
TOM1-217ENST00000497448 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
TOM1-217ENST00000497448 CD99L2Q8TCZ2 262 aa13.75□□□□□ -0.21
TOM1-217ENST00000497448 OTUD5Q96G74 571 aa13.75□□□□□ -0.21
TOM1-217ENST00000497448 FAM89AQ96GI7 184 aa13.75□□□□□ -0.21
TOM1-217ENST00000497448 PRKG1Q13976 671 aa13.74□□□□□ -0.21
TOM1-217ENST00000497448 IFNL1Q8IU54 200 aa13.74□□□□□ -0.21
TOM1-217ENST00000497448 ERO1AQ96HE7 468 aa13.74□□□□□ -0.21
TOM1-217ENST00000497448 TSPYL4Q9UJ04 414 aa13.74□□□□□ -0.21
TOM1-217ENST00000497448 GGA1Q9UJY5 639 aa13.74□□□□□ -0.21
TOM1-217ENST00000497448 SPEF2Q9C093 1822 aa13.74□□□□□ -0.21
TOM1-217ENST00000497448 CEP290O15078 2479 aa13.73□□□□□ -0.21
TOM1-217ENST00000497448 MANSC4A6NHS7 340 aaPredicted RBP13.73□□□□□ -0.21
TOM1-217ENST00000497448 H0YGN5 161 aa13.73□□□□□ -0.21
TOM1-217ENST00000497448 IGF2BP3O00425 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
TOM1-217ENST00000497448 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
TOM1-217ENST00000497448 RPS8P62241 208 aaKnown RBP13.73□□□□□ -0.21
TOM1-217ENST00000497448 CAP1Q01518 475 aa13.73□□□□□ -0.21
TOM1-217ENST00000497448 LDLRAD1Q5T700 205 aa13.73□□□□□ -0.21
TOM1-217ENST00000497448 ARMC9Q7Z3E5 817 aa13.73□□□□□ -0.21
TOM1-217ENST00000497448 SSC5DA1L4H1 1573 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 ECM29Q5VYK3 1845 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 WNT10BO00744 389 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 NFE2L2Q16236 605 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
TOM1-217ENST00000497448 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 ISCA1Q9BUE6 129 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 ANKIB1Q9P2G1 1089 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
TOM1-217ENST00000497448 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms