RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CAMSAP2Q08AD1 1489 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 SPHKAPQ2M3C7 1700 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 C11orf91Q3C1V1 193 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 IER5Q5VY09 327 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZNF518AQ6AHZ1 1483 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 THSD4Q6ZMP0 1018 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZNF662Q6ZS27 426 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 SLC9A9Q8IVB4 645 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 ETFBKMTQ8IXQ9 262 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 NBPF15Q8N660 670 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 KCNB2Q92953 911 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 WNT2BQ93097 391 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 OTUD5Q96G74 571 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 ABHD8Q96I13 439 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 FAM161BQ96MY7 647 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 OSBPL2Q9H1P3 480 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 PIF1Q9H611 641 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 IL21Q9HBE4 155 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 CAPN10Q9HC96 672 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 C11orf16Q9NQ32 467 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 FAM135AQ9P2D6 1515 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 VTI1BQ9UEU0 232 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 MLH3Q9UHC1 1453 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 BRWD3Q6RI45 1802 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 ABCA6Q8N139 1617 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 PRDM15P57071 1507 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 PNPLA6Q8IY17 1366 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 TLL1O43897 1013 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 PPP1R12BO60237 982 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 ST18O60284 1047 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 XRCC5P13010 732 aaKnown RBP3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 GPR162Q16538 588 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 NBPF8Q3BBV2 869 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 KRT27Q7Z3Y8 459 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 DHX38Q92620 1227 aaKnown RBP3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 VTI1AQ96AJ9 217 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 SEC16BQ96JE7 1060 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 SETDB2Q96T68 719 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 DNAJC2Q99543 621 aaKnown RBP3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 MTRQ99707 1265 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 NOC4LQ9BVI4 516 aaKnown RBP3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 CHMP4AQ9BY43 222 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 NIF3L1Q9GZT8 377 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 C12orf49Q9H741 205 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 POLIQ9UNA4 740 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 SPG7Q9UQ90 795 aa3.56□□□□□ -1.84
CKS1BP2-201ENST00000497342 CLTCQ00610 1675 aaKnown RBP3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 ITSN2Q9NZM3 1697 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 TIAM1Q13009 1591 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 UGGT1Q9NYU2 1555 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 POTEMA6NI47 508 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 EIF1AYO14602 144 aaKnown RBP3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 SIAH2O43255 324 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 IL2RAP01589 272 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 TNNI2P48788 182 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 RPIAP49247 311 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 EMP3P54852 163 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 NFE2L2Q16236 605 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 PPP1R18Q6NYC8 613 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 POTEGQ6S5H5 508 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 BRINP3Q76B58 766 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 HS2ST1Q7LGA3 356 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 KDF1Q8NAX2 398 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZDHHC1Q8WTX9 485 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 SPACA7Q96KW9 195 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 ESYT1Q9BSJ8 1104 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 RSRP1Q9BUV0 290 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 PRDM10Q9NQV6 1147 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 FAM13BQ9NYF5 915 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 DMGDHQ9UI17 866 aaKnown RBP3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 FCF1Q9Y324 198 aaKnown RBP3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 NRKQ7Z2Y5 1582 aa3.55□□□□□ -1.84
CKS1BP2-201ENST00000497342 NLRP1Q9C000 1473 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 PTCH1Q13635 1447 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 CARMIL1Q5VZK9 1371 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 PARD3Q8TEW0 1356 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 WDR90Q96KV7 1748 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 CPNE3O75131 537 aaKnown RBP3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 LGR5O75473 907 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 EIF4BP23588 611 aaKnown RBP3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 LTKP29376 864 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZAP70P43403 619 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 VEGFBP49765 207 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 COPS2P61201 443 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 SKOR1P84550 965 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 MYT1Q01538 1121 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 TRIM32Q13049 653 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 NR5A1Q13285 461 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 CLN3Q13286 438 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 COL9A2Q14055 689 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 LINC01559Q495D7 138 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 PLEKHG4Q58EX7 1191 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 EFCAB2Q5VUJ9 269 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 VASH1Q7L8A9 365 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 USP48Q86UV5 1035 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 JAZF1Q86VZ6 243 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 VPS37DQ86XT2 251 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 PPARGC1BQ86YN6 1023 aaKnown RBP3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 ALDH16A1Q8IZ83 802 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 CCDC24Q8N4L8 307 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms