RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 JPH1Q9HDC5 661 aaPredicted RBP9.06□□□□□ -0.96
SNX13-211ENST00000496855 FRRS1LQ9P0K9 344 aa9.06□□□□□ -0.96
SNX13-211ENST00000496855 PATL2C9JE40 543 aaKnown RBP9.05□□□□□ -0.96
SNX13-211ENST00000496855 NDUFB5O43674 189 aa9.05□□□□□ -0.96
SNX13-211ENST00000496855 RGS9O75916 674 aaPredicted RBP9.05□□□□□ -0.96
SNX13-211ENST00000496855 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
SNX13-211ENST00000496855 COL9A3Q14050 684 aaPredicted RBP9.05□□□□□ -0.96
SNX13-211ENST00000496855 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
SNX13-211ENST00000496855 TRIM11Q96F44 468 aa9.05□□□□□ -0.96
SNX13-211ENST00000496855 CNTN3Q9P232 1028 aa9.05□□□□□ -0.96
SNX13-211ENST00000496855 CYP2E1P05181 493 aaPredicted RBP9.04□□□□□ -0.96
SNX13-211ENST00000496855 RASSF7Q02833 373 aa9.04□□□□□ -0.96
SNX13-211ENST00000496855 HYAL2Q12891 473 aa9.04□□□□□ -0.96
SNX13-211ENST00000496855 COL13A1Q5TAT6 717 aaPredicted RBP9.04□□□□□ -0.96
SNX13-211ENST00000496855 SUV39H2Q9H5I1 410 aa9.04□□□□□ -0.96
SNX13-211ENST00000496855 TNFRSF21O75509 655 aa9.03□□□□□ -0.96
SNX13-211ENST00000496855 GHRHP01286 108 aa9.03□□□□□ -0.96
SNX13-211ENST00000496855 C1orf127Q8N9H9 656 aa9.03□□□□□ -0.96
SNX13-211ENST00000496855 BIN2Q9UBW5 565 aaPredicted RBP9.03□□□□□ -0.96
SNX13-211ENST00000496855 KIF4AO95239 1232 aa9.02□□□□□ -0.96
SNX13-211ENST00000496855 NID1P14543 1247 aa9.02□□□□□ -0.96
SNX13-211ENST00000496855 AFF1P51825 1210 aaKnown RBP9.02□□□□□ -0.96
SNX13-211ENST00000496855 TTC9Q92623 222 aa9.02□□□□□ -0.96
SNX13-211ENST00000496855 CITED4Q96RK1 184 aa9.02□□□□□ -0.96
SNX13-211ENST00000496855 PLVAPQ9BX97 442 aa9.02□□□□□ -0.96
SNX13-211ENST00000496855 SMG9Q9H0W8 520 aaKnown RBP9.02□□□□□ -0.96
SNX13-211ENST00000496855 RBSNQ9H1K0 784 aa9.02□□□□□ -0.96
SNX13-211ENST00000496855 NOP53Q9NZM5 478 aaKnown RBP9.02□□□□□ -0.96
SNX13-211ENST00000496855 CES1P23141 567 aa9.02□□□□□ -0.97
SNX13-211ENST00000496855 AEBP1Q8IUX7 1158 aa9.02□□□□□ -0.97
SNX13-211ENST00000496855 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
SNX13-211ENST00000496855 PLD4Q96BZ4 506 aa9.02□□□□□ -0.97
SNX13-211ENST00000496855 CHRDQ9H2X0 955 aa9.02□□□□□ -0.97
SNX13-211ENST00000496855 KANSL3Q9P2N6 904 aa9.02□□□□□ -0.97
SNX13-211ENST00000496855 PHACTR2O75167 634 aa9.01□□□□□ -0.97
SNX13-211ENST00000496855 COL8A1P27658 744 aa9.01□□□□□ -0.97
SNX13-211ENST00000496855 PDE3BQ13370 1112 aa9.01□□□□□ -0.97
SNX13-211ENST00000496855 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
SNX13-211ENST00000496855 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
SNX13-211ENST00000496855 SPACA7Q96KW9 195 aa9.01□□□□□ -0.97
SNX13-211ENST00000496855 FOXD3Q9UJU5 478 aaPredicted RBP9.01□□□□□ -0.97
SNX13-211ENST00000496855 GDF11O95390 407 aa9□□□□□ -0.97
SNX13-211ENST00000496855 GRIK5Q16478 980 aa9□□□□□ -0.97
SNX13-211ENST00000496855 NCAPG2Q86XI2 1143 aa9□□□□□ -0.97
SNX13-211ENST00000496855 FAM129BQ96TA1 746 aa9□□□□□ -0.97
SNX13-211ENST00000496855 SALL4Q9UJQ4 1053 aa9□□□□□ -0.97
SNX13-211ENST00000496855 SPDYE3A6NKU9 549 aa8.99□□□□□ -0.97
SNX13-211ENST00000496855 ALYREFQ86V81 257 aaKnown RBP8.99□□□□□ -0.97
SNX13-211ENST00000496855 TMEM151AQ8N4L1 468 aa8.99□□□□□ -0.97
SNX13-211ENST00000496855 CEP120Q8N960 986 aa8.99□□□□□ -0.97
SNX13-211ENST00000496855 RBCK1Q9BYM8 510 aa8.99□□□□□ -0.97
SNX13-211ENST00000496855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.99□□□□□ -0.97
SNX13-211ENST00000496855 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
SNX13-211ENST00000496855 DCAF5Q96JK2 942 aa8.98□□□□□ -0.97
SNX13-211ENST00000496855 DCTN4Q9UJW0 460 aa8.98□□□□□ -0.97
SNX13-211ENST00000496855 EREGO14944 169 aa8.97□□□□□ -0.97
SNX13-211ENST00000496855 ATP11AP98196 1134 aa8.97□□□□□ -0.97
SNX13-211ENST00000496855 TRAPPC3LQ5T215 181 aa8.97□□□□□ -0.97
SNX13-211ENST00000496855 ZFYVE28Q9HCC9 887 aa8.97□□□□□ -0.97
SNX13-211ENST00000496855 IGHA2P01877 340 aa8.96□□□□□ -0.97
SNX13-211ENST00000496855 MSL1Q68DK7 614 aa8.96□□□□□ -0.97
SNX13-211ENST00000496855 ILDR2Q71H61 639 aa8.96□□□□□ -0.97
SNX13-211ENST00000496855 RASSF4Q9H2L5 321 aa8.96□□□□□ -0.97
SNX13-211ENST00000496855 GPR182O15218 404 aa8.96□□□□□ -0.98
SNX13-211ENST00000496855 PBX4Q9BYU1 374 aa8.96□□□□□ -0.98
SNX13-211ENST00000496855 AMOTL2Q9Y2J4 779 aa8.96□□□□□ -0.98
SNX13-211ENST00000496855 SMNDC1O75940 238 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNX13-211ENST00000496855 NEFLP07196 543 aa8.95□□□□□ -0.98
SNX13-211ENST00000496855 MAPK1P28482 360 aa8.95□□□□□ -0.98
SNX13-211ENST00000496855 PRRT3Q5FWE3 981 aa8.95□□□□□ -0.98
SNX13-211ENST00000496855 CEP135Q66GS9 1140 aa8.95□□□□□ -0.98
SNX13-211ENST00000496855 GDF6Q6KF10 455 aaPredicted RBP8.95□□□□□ -0.98
SNX13-211ENST00000496855 WFDC8Q8IUA0 241 aa8.95□□□□□ -0.98
SNX13-211ENST00000496855 DMRTC2Q8IXT2 367 aaPredicted RBP8.95□□□□□ -0.98
SNX13-211ENST00000496855 DMRTB1Q96MA1 342 aa8.95□□□□□ -0.98
SNX13-211ENST00000496855 TRIM33Q9UPN9 1127 aa8.95□□□□□ -0.98
SNX13-211ENST00000496855 SPATA31C1P0DKV0 1188 aa8.94□□□□□ -0.98
SNX13-211ENST00000496855 EDN3P14138 238 aa8.94□□□□□ -0.98
SNX13-211ENST00000496855 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
SNX13-211ENST00000496855 TMC7Q7Z402 723 aa8.94□□□□□ -0.98
SNX13-211ENST00000496855 A0A0A0MRY4 1105 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 KRBA1A5PL33 1030 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 ACPPP15309 386 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 BAG6P46379 1132 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 ORC1Q13415 861 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 CACTIN-AS1Q8N1I8 211 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 ALKBH8Q96BT7 664 aaKnown RBP8.93□□□□□ -0.98
SNX13-211ENST00000496855 NIF3L1Q9GZT8 377 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 DZANK1Q9NVP4 752 aa8.93□□□□□ -0.98
SNX13-211ENST00000496855 IL22RA1Q8N6P7 574 aa8.92□□□□□ -0.98
SNX13-211ENST00000496855 NFKBIEO00221 500 aa8.91□□□□□ -0.98
SNX13-211ENST00000496855 POLR3DP05423 398 aaPredicted RBP8.91□□□□□ -0.98
SNX13-211ENST00000496855 RAC1P63000 192 aa8.91□□□□□ -0.98
SNX13-211ENST00000496855 DTWD1Q8N5C7 304 aa8.91□□□□□ -0.98
SNX13-211ENST00000496855 POP1Q99575 1024 aaKnown RBP8.91□□□□□ -0.98
SNX13-211ENST00000496855 CPNE3O75131 537 aaKnown RBP8.9□□□□□ -0.98
SNX13-211ENST00000496855 TRPA1O75762 1119 aa8.9□□□□□ -0.98
SNX13-211ENST00000496855 PEAR1Q5VY43 1037 aaPredicted RBP8.9□□□□□ -0.98
SNX13-211ENST00000496855 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms