RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
TARDBP-210ENST00000496840 HFE2Q6ZVN8 426 aa11.67□□□□□ -0.54
TARDBP-210ENST00000496840 NSUN5Q96P11 429 aaKnown RBP11.67□□□□□ -0.54
TARDBP-210ENST00000496840 GHRHP01286 108 aa11.66□□□□□ -0.54
TARDBP-210ENST00000496840 CD163Q86VB7 1156 aa11.66□□□□□ -0.54
TARDBP-210ENST00000496840 SMG9Q9H0W8 520 aaKnown RBP11.66□□□□□ -0.54
TARDBP-210ENST00000496840 RBSNQ9H1K0 784 aa11.66□□□□□ -0.54
TARDBP-210ENST00000496840 ELP3Q9H9T3 547 aa11.66□□□□□ -0.54
TARDBP-210ENST00000496840 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
TARDBP-210ENST00000496840 J3QW42 95 aa11.65□□□□□ -0.54
TARDBP-210ENST00000496840 ABL1P00519 1130 aa11.65□□□□□ -0.54
TARDBP-210ENST00000496840 MSL1Q68DK7 614 aa11.65□□□□□ -0.54
TARDBP-210ENST00000496840 ZNF438Q7Z4V0 828 aa11.65□□□□□ -0.54
TARDBP-210ENST00000496840 PLD4Q96BZ4 506 aa11.65□□□□□ -0.54
TARDBP-210ENST00000496840 A0A0A0MRY4 1105 aa11.64□□□□□ -0.55
TARDBP-210ENST00000496840 CHRNA4P43681 627 aa11.64□□□□□ -0.55
TARDBP-210ENST00000496840 HYAL2Q12891 473 aa11.64□□□□□ -0.55
TARDBP-210ENST00000496840 ZNF211Q13398 564 aaPredicted RBP11.64□□□□□ -0.55
TARDBP-210ENST00000496840 FAM229AH3BQW9 127 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 ICMTO60725 284 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 KIF4AO95239 1232 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 USP5P45974 858 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 RAC1P63000 192 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 DTWD1Q8N5C7 304 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 GGNBP2Q9H3C7 697 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 TMEM63CQ9P1W3 806 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 POLIQ9UNA4 740 aa11.63□□□□□ -0.55
TARDBP-210ENST00000496840 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
TARDBP-210ENST00000496840 NACC1Q96RE7 527 aa11.62□□□□□ -0.55
TARDBP-210ENST00000496840 FZD6O60353 706 aa11.61□□□□□ -0.55
TARDBP-210ENST00000496840 APBA3O96018 575 aa11.61□□□□□ -0.55
TARDBP-210ENST00000496840 ELNP15502 786 aa11.61□□□□□ -0.55
TARDBP-210ENST00000496840 COL13A1Q5TAT6 717 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-210ENST00000496840 WFDC8Q8IUA0 241 aa11.61□□□□□ -0.55
TARDBP-210ENST00000496840 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-210ENST00000496840 ANO2Q9NQ90 1003 aa11.61□□□□□ -0.55
TARDBP-210ENST00000496840 SERPINB4P48594 390 aa11.6□□□□□ -0.55
TARDBP-210ENST00000496840 EHHADHQ08426 723 aa11.6□□□□□ -0.55
TARDBP-210ENST00000496840 AAMPQ13685 434 aa11.6□□□□□ -0.55
TARDBP-210ENST00000496840 C8orf34Q49A92 452 aa11.6□□□□□ -0.55
TARDBP-210ENST00000496840 FMR1NBQ8N0W7 255 aaPredicted RBP11.6□□□□□ -0.55
TARDBP-210ENST00000496840 CACTIN-AS1Q8N1I8 211 aa11.6□□□□□ -0.55
TARDBP-210ENST00000496840 SPACA7Q96KW9 195 aa11.6□□□□□ -0.55
TARDBP-210ENST00000496840 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-210ENST00000496840 CNTN3Q9P232 1028 aa11.58□□□□□ -0.56
TARDBP-210ENST00000496840 H3BRB1 525 aa11.57□□□□□ -0.56
TARDBP-210ENST00000496840 BAG6P46379 1132 aa11.57□□□□□ -0.56
TARDBP-210ENST00000496840 GRIK4Q16099 956 aa11.57□□□□□ -0.56
TARDBP-210ENST00000496840 ECM1Q16610 540 aa11.57□□□□□ -0.56
TARDBP-210ENST00000496840 GJD3Q8N144 294 aa11.57□□□□□ -0.56
TARDBP-210ENST00000496840 PMEPA1Q969W9 287 aa11.57□□□□□ -0.56
TARDBP-210ENST00000496840 TUT1Q9H6E5 874 aaKnown RBP11.57□□□□□ -0.56
TARDBP-210ENST00000496840 A6NHS1 94 aa11.56□□□□□ -0.56
TARDBP-210ENST00000496840 GLYCTKQ8IVS8 523 aa11.56□□□□□ -0.56
TARDBP-210ENST00000496840 CEP120Q8N960 986 aa11.56□□□□□ -0.56
TARDBP-210ENST00000496840 SALL4Q9UJQ4 1053 aa11.56□□□□□ -0.56
TARDBP-210ENST00000496840 C9orf172C9J069 976 aa11.55□□□□□ -0.56
TARDBP-210ENST00000496840 NCAPG2Q86XI2 1143 aa11.55□□□□□ -0.56
TARDBP-210ENST00000496840 FBXO11Q86XK2 927 aa11.55□□□□□ -0.56
TARDBP-210ENST00000496840 C1orf127Q8N9H9 656 aa11.55□□□□□ -0.56
TARDBP-210ENST00000496840 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
TARDBP-210ENST00000496840 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
TARDBP-210ENST00000496840 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
TARDBP-210ENST00000496840 SELPP16109 830 aa11.54□□□□□ -0.56
TARDBP-210ENST00000496840 CES1P23141 567 aa11.54□□□□□ -0.56
TARDBP-210ENST00000496840 GATA4P43694 442 aa11.54□□□□□ -0.56
TARDBP-210ENST00000496840 ATP11AP98196 1134 aa11.54□□□□□ -0.56
TARDBP-210ENST00000496840 GDF6Q6KF10 455 aaPredicted RBP11.54□□□□□ -0.56
TARDBP-210ENST00000496840 LENG1Q96BZ8 264 aaPredicted RBP11.54□□□□□ -0.56
TARDBP-210ENST00000496840 CHRDQ9H2X0 955 aa11.54□□□□□ -0.56
TARDBP-210ENST00000496840 SRA1Q9HD15 236 aaKnown RBP11.54□□□□□ -0.56
TARDBP-210ENST00000496840 TRIM33Q9UPN9 1127 aa11.54□□□□□ -0.56
TARDBP-210ENST00000496840 TNFRSF21O75509 655 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 BRD1O95696 1058 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 ARHGAP4P98171 946 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 IL22RA1Q8N6P7 574 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 SNX29Q8TEQ0 813 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 PBX4Q9BYU1 374 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 MUC3BQ9H195 1237 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 RASSF4Q9H2L5 321 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
TARDBP-210ENST00000496840 NRG1Q02297 640 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-210ENST00000496840 ADGRE1Q14246 886 aa11.51□□□□□ -0.57
TARDBP-210ENST00000496840 CEP135Q66GS9 1140 aa11.51□□□□□ -0.57
TARDBP-210ENST00000496840 MAP4K3Q8IVH8 894 aa11.51□□□□□ -0.57
TARDBP-210ENST00000496840 BRPF3Q9ULD4 1205 aa11.51□□□□□ -0.57
TARDBP-210ENST00000496840 GNEQ9Y223 722 aaKnown RBP11.51□□□□□ -0.57
TARDBP-210ENST00000496840 PHACTR2O75167 634 aa11.5□□□□□ -0.57
TARDBP-210ENST00000496840 DEAF1O75398 565 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-210ENST00000496840 MBTPS1Q14703 1052 aa11.49□□□□□ -0.57
TARDBP-210ENST00000496840 SHISA2Q6UWI4 295 aa11.49□□□□□ -0.57
TARDBP-210ENST00000496840 DCAF11Q8TEB1 546 aa11.49□□□□□ -0.57
TARDBP-210ENST00000496840 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-210ENST00000496840 DLL1O00548 723 aa11.48□□□□□ -0.57
TARDBP-210ENST00000496840 NDUFB5O43674 189 aa11.48□□□□□ -0.57
TARDBP-210ENST00000496840 IGF2-ASQ6U949 168 aa11.48□□□□□ -0.57
TARDBP-210ENST00000496840 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
TARDBP-210ENST00000496840 DZANK1Q9NVP4 752 aa11.48□□□□□ -0.57
TARDBP-210ENST00000496840 FOXD3Q9UJU5 478 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms