RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 STARD3NLO95772 234 aa17.75■□□□□ 0.43
UBXN11-216ENST00000496466 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
UBXN11-216ENST00000496466 SLC4A9Q96Q91 983 aa17.75■□□□□ 0.43
UBXN11-216ENST00000496466 SEC62Q99442 399 aaKnown RBP17.75■□□□□ 0.43
UBXN11-216ENST00000496466 ITGB4P16144 1822 aa17.74■□□□□ 0.43
UBXN11-216ENST00000496466 PDCP20941 246 aa17.74■□□□□ 0.43
UBXN11-216ENST00000496466 TIMM10P62072 90 aa17.74■□□□□ 0.43
UBXN11-216ENST00000496466 KIF6Q6ZMV9 814 aa17.74■□□□□ 0.43
UBXN11-216ENST00000496466 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
UBXN11-216ENST00000496466 CDC37L1Q7L3B6 337 aa17.74■□□□□ 0.43
UBXN11-216ENST00000496466 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
UBXN11-216ENST00000496466 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
UBXN11-216ENST00000496466 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
UBXN11-216ENST00000496466 COL16A1Q07092 1604 aaPredicted RBP17.74■□□□□ 0.43
UBXN11-216ENST00000496466 EXOC5O00471 708 aa17.73■□□□□ 0.43
UBXN11-216ENST00000496466 NEK1Q96PY6 1258 aa17.73■□□□□ 0.43
UBXN11-216ENST00000496466 PUS3Q9BZE2 481 aaKnown RBP17.73■□□□□ 0.43
UBXN11-216ENST00000496466 BCL9O00512 1426 aa17.73■□□□□ 0.43
UBXN11-216ENST00000496466 EYA2O00167 538 aa17.73■□□□□ 0.43
UBXN11-216ENST00000496466 MCM5P33992 734 aa17.73■□□□□ 0.43
UBXN11-216ENST00000496466 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
UBXN11-216ENST00000496466 RRP9O43818 475 aaKnown RBP17.72■□□□□ 0.43
UBXN11-216ENST00000496466 STK3Q13188 491 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 KBTBD3Q8NAB2 608 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 FAM89AQ96GI7 184 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 HLFQ16534 295 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 KLHL34Q8N239 644 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 FUCA2Q9BTY2 467 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 GPR108Q9NPR9 543 aa17.72■□□□□ 0.43
UBXN11-216ENST00000496466 CYP21A2P08686 494 aa17.71■□□□□ 0.43
UBXN11-216ENST00000496466 HCLS1P14317 486 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-216ENST00000496466 KRT85P78386 507 aa17.71■□□□□ 0.43
UBXN11-216ENST00000496466 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
UBXN11-216ENST00000496466 TTC6Q86TZ1 520 aa17.71■□□□□ 0.43
UBXN11-216ENST00000496466 CCDC85AQ96PX6 553 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-216ENST00000496466 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-216ENST00000496466 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.43
UBXN11-216ENST00000496466 ADAMTS2O95450 1211 aa17.71■□□□□ 0.43
UBXN11-216ENST00000496466 CYP19A1P11511 503 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-216ENST00000496466 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
UBXN11-216ENST00000496466 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-216ENST00000496466 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
UBXN11-216ENST00000496466 MAP3K15Q6ZN16 1313 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 FAM173BQ6P4H8 233 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 Q6ZUG5 572 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 GTF3C6Q969F1 213 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 COL22A1Q8NFW1 1626 aaPredicted RBP17.7■□□□□ 0.42
UBXN11-216ENST00000496466 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
UBXN11-216ENST00000496466 GPTP24298 496 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 GIGYF2Q6Y7W6 1299 aaKnown RBP17.7■□□□□ 0.42
UBXN11-216ENST00000496466 PAG1Q9NWQ8 432 aa17.7■□□□□ 0.42
UBXN11-216ENST00000496466 ELP1O95163 1332 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 GOLIM4O00461 696 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 CIAO1O76071 339 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 CCDC57Q2TAC2 916 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 ZBTB1Q9Y2K1 713 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 PTMAP06454 111 aaKnown RBP17.69■□□□□ 0.42
UBXN11-216ENST00000496466 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
UBXN11-216ENST00000496466 ZMYND15Q9H091 742 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
UBXN11-216ENST00000496466 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
UBXN11-216ENST00000496466 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
UBXN11-216ENST00000496466 JAK2O60674 1132 aa17.68■□□□□ 0.42
UBXN11-216ENST00000496466 SLFNL1Q499Z3 407 aa17.68■□□□□ 0.42
UBXN11-216ENST00000496466 TPM2P07951 284 aa17.67■□□□□ 0.42
UBXN11-216ENST00000496466 STOX1Q6ZVD7 989 aa17.67■□□□□ 0.42
UBXN11-216ENST00000496466 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
UBXN11-216ENST00000496466 HSP90AA2PQ14568 343 aaPredicted RBP17.67■□□□□ 0.42
UBXN11-216ENST00000496466 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
UBXN11-216ENST00000496466 ZMYM1Q5SVZ6 1142 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 CEP126Q9P2H0 1117 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 LRP6O75581 1613 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 ADCY5O95622 1261 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 CSF1RP07333 972 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 DSCC1Q9BVC3 393 aa17.66■□□□□ 0.42
UBXN11-216ENST00000496466 SCAND2PQ9GZW5 306 aaPredicted RBP17.66■□□□□ 0.42
UBXN11-216ENST00000496466 TFIP11Q9UBB9 837 aaKnown RBP17.66■□□□□ 0.42
UBXN11-216ENST00000496466 LAMA4Q16363 1823 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 KDM4AO75164 1064 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 LIG1P18858 919 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 BRF1Q92994 677 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 LRRC2Q9BYS8 371 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBXN11-216ENST00000496466 A0A0G2JS52 829 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
UBXN11-216ENST00000496466 IFIT1P09914 478 aaKnown RBP17.65■□□□□ 0.42
UBXN11-216ENST00000496466 TBC1D2BQ9UPU7 963 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
UBXN11-216ENST00000496466 ADORA1P30542 326 aa17.64■□□□□ 0.41
UBXN11-216ENST00000496466 SCRN1Q12765 414 aa17.64■□□□□ 0.41
UBXN11-216ENST00000496466 IFIT5Q13325 482 aaKnown RBP17.64■□□□□ 0.41
UBXN11-216ENST00000496466 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
UBXN11-216ENST00000496466 DHX32Q7L7V1 743 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms