RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 GGA1Q9UJY5 639 aa15.05■□□□□ -0
THBS3-208ENST00000496332 RTL9Q8NET4 1388 aa15.05■□□□□ -0
THBS3-208ENST00000496332 CACNA1FO60840 1977 aa15.04■□□□□ -0
THBS3-208ENST00000496332 LTBP1Q14766 1721 aa15.04■□□□□ -0
THBS3-208ENST00000496332 PASKQ96RG2 1323 aa15.04■□□□□ -0
THBS3-208ENST00000496332 ECE2O60344 883 aa15.04■□□□□ -0
THBS3-208ENST00000496332 ITGBL1O95965 494 aaPredicted RBP15.04■□□□□ -0
THBS3-208ENST00000496332 CSF1RP07333 972 aa15.04■□□□□ -0
THBS3-208ENST00000496332 USP50Q70EL3 339 aaPredicted RBP15.04■□□□□ -0
THBS3-208ENST00000496332 CNTROBQ8N137 903 aa15.04■□□□□ -0
THBS3-208ENST00000496332 BCL2L13Q9BXK5 485 aa15.04■□□□□ -0
THBS3-208ENST00000496332 BSDC1Q9NW68 430 aaPredicted RBP15.04■□□□□ -0
THBS3-208ENST00000496332 XDHP47989 1333 aa15.03■□□□□ -0
THBS3-208ENST00000496332 ITGA6P23229 1130 aa15.03■□□□□ -0
THBS3-208ENST00000496332 SLC4A10Q6U841 1118 aa15.03■□□□□ -0
THBS3-208ENST00000496332 MRPL50Q8N5N7 158 aaKnown RBP15.03■□□□□ -0
THBS3-208ENST00000496332 KCNQ5Q9NR82 932 aa15.03■□□□□ -0
THBS3-208ENST00000496332 ADARB2Q9NS39 739 aaKnown RBP15.03■□□□□ -0
THBS3-208ENST00000496332 MINPP1Q9UNW1 487 aa15.03■□□□□ -0
THBS3-208ENST00000496332 G3V3G9 751 aa15.02■□□□□ -0
THBS3-208ENST00000496332 PSMD14O00487 310 aa15.02■□□□□ -0
THBS3-208ENST00000496332 ATP2B4P23634 1241 aa15.02■□□□□ -0
THBS3-208ENST00000496332 IGHMBP2P38935 993 aaKnown RBP15.02■□□□□ -0
THBS3-208ENST00000496332 FAM161AQ3B820 660 aa15.02■□□□□ -0
THBS3-208ENST00000496332 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
THBS3-208ENST00000496332 CREBZFQ9NS37 354 aa15.02■□□□□ -0
THBS3-208ENST00000496332 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
THBS3-208ENST00000496332 ADAMTSL1Q8N6G6 1762 aa15.02□□□□□ -0.01
THBS3-208ENST00000496332 WTIPA6NIX2 430 aaPredicted RBP15.01□□□□□ -0.01
THBS3-208ENST00000496332 GRM8O00222 908 aa15.01□□□□□ -0.01
THBS3-208ENST00000496332 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
THBS3-208ENST00000496332 FOXO4P98177 505 aa15.01□□□□□ -0.01
THBS3-208ENST00000496332 TRMT2AQ8IZ69 625 aaKnown RBP15.01□□□□□ -0.01
THBS3-208ENST00000496332 SSH1Q8WYL5 1049 aa15.01□□□□□ -0.01
THBS3-208ENST00000496332 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
THBS3-208ENST00000496332 C9orf78Q9NZ63 289 aaPredicted RBP15.01□□□□□ -0.01
THBS3-208ENST00000496332 CNOT7Q9UIV1 285 aaKnown RBP15.01□□□□□ -0.01
THBS3-208ENST00000496332 JMYQ8N9B5 988 aa15□□□□□ -0.01
THBS3-208ENST00000496332 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
THBS3-208ENST00000496332 SHTN1A0MZ66 631 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 ANKRD18BA2A2Z9 1011 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 TMEM88BA6NKF7 163 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 H7C1D1 291 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 CCT4P50991 539 aaKnown RBP14.99□□□□□ -0.01
THBS3-208ENST00000496332 EPHA10Q5JZY3 1008 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 DIEXFQ68CQ4 756 aaKnown RBP14.99□□□□□ -0.01
THBS3-208ENST00000496332 LMBR1LQ6UX01 489 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 MICALL2Q8IY33 904 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 DPF2Q92785 391 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 CHMP3Q9Y3E7 222 aa14.99□□□□□ -0.01
THBS3-208ENST00000496332 PTPRCP08575 1304 aa14.98□□□□□ -0.01
THBS3-208ENST00000496332 MYH3P11055 1940 aa14.98□□□□□ -0.01
THBS3-208ENST00000496332 VIL1P09327 827 aaKnown RBP14.98□□□□□ -0.01
THBS3-208ENST00000496332 RPS12P25398 132 aaKnown RBP14.98□□□□□ -0.01
THBS3-208ENST00000496332 HIRAP54198 1017 aaPredicted RBP14.98□□□□□ -0.01
THBS3-208ENST00000496332 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
THBS3-208ENST00000496332 MIER1Q8N108 512 aa14.98□□□□□ -0.01
THBS3-208ENST00000496332 TRPM4Q8TD43 1214 aa14.98□□□□□ -0.01
THBS3-208ENST00000496332 ANKRD2Q9GZV1 360 aa14.98□□□□□ -0.01
THBS3-208ENST00000496332 MKRN1Q9UHC7 482 aaKnown RBP14.98□□□□□ -0.01
THBS3-208ENST00000496332 PCNTO95613 3336 aa14.97□□□□□ -0.01
THBS3-208ENST00000496332 ALDH1L2Q3SY69 923 aa14.97□□□□□ -0.01
THBS3-208ENST00000496332 LEMD3Q9Y2U8 911 aa14.97□□□□□ -0.01
THBS3-208ENST00000496332 MED23Q9ULK4 1368 aa14.97□□□□□ -0.01
THBS3-208ENST00000496332 TRAF5O00463 557 aa14.96□□□□□ -0.01
THBS3-208ENST00000496332 NBPF7P0C2Y1 421 aaPredicted RBP14.96□□□□□ -0.01
THBS3-208ENST00000496332 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.01
THBS3-208ENST00000496332 CHRNDQ07001 517 aa14.96□□□□□ -0.01
THBS3-208ENST00000496332 CCDC57Q2TAC2 916 aa14.96□□□□□ -0.01
THBS3-208ENST00000496332 SAMD7Q7Z3H4 446 aa14.96□□□□□ -0.01
THBS3-208ENST00000496332 PODNQ7Z5L7 613 aa14.96□□□□□ -0.01
THBS3-208ENST00000496332 ZC3H15Q8WU90 426 aaKnown RBP14.96□□□□□ -0.01
THBS3-208ENST00000496332 SMC4Q9NTJ3 1288 aa14.96□□□□□ -0.01
THBS3-208ENST00000496332 PGAP2Q9UHJ9 254 aa14.96□□□□□ -0.01
THBS3-208ENST00000496332 ZNF804BA4D1E1 1349 aa14.95□□□□□ -0.02
THBS3-208ENST00000496332 TBC1D10BQ4KMP7 808 aaPredicted RBP14.95□□□□□ -0.02
THBS3-208ENST00000496332 RBM26Q5T8P6 1007 aaKnown RBP14.95□□□□□ -0.02
THBS3-208ENST00000496332 RSBN1LQ6PCB5 846 aaPredicted RBP14.95□□□□□ -0.02
THBS3-208ENST00000496332 TXNRD3Q86VQ6 643 aa14.95□□□□□ -0.02
THBS3-208ENST00000496332 KAZALD1Q96I82 304 aa14.95□□□□□ -0.02
THBS3-208ENST00000496332 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
THBS3-208ENST00000496332 ZNF594Q96JF6 807 aaPredicted RBP14.95□□□□□ -0.02
THBS3-208ENST00000496332 UTYO14607 1347 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 USP17L3A6NCW0 530 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 USP17L4A6NCW7 530 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 EGFRP00533 1210 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 CT47B1P0C2W7 299 aaPredicted RBP14.94□□□□□ -0.02
THBS3-208ENST00000496332 KCNJ4P48050 445 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 USP17L1Q7RTZ2 530 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 HELBQ8NG08 1087 aaPredicted RBP14.94□□□□□ -0.02
THBS3-208ENST00000496332 GLIS2Q9BZE0 524 aaPredicted RBP14.94□□□□□ -0.02
THBS3-208ENST00000496332 CNTNAP1P78357 1384 aa14.94□□□□□ -0.02
THBS3-208ENST00000496332 TAF5LO75529 589 aa14.93□□□□□ -0.02
THBS3-208ENST00000496332 KLRK1P26718 216 aa14.93□□□□□ -0.02
THBS3-208ENST00000496332 LDHAL6AQ6ZMR3 332 aa14.93□□□□□ -0.02
THBS3-208ENST00000496332 AGBL3Q8NEM8 1001 aa14.93□□□□□ -0.02
THBS3-208ENST00000496332 COA1Q9GZY4 146 aa14.93□□□□□ -0.02
THBS3-208ENST00000496332 ABT1Q9ULW3 272 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms