RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 LRRC37AA6NMS7 1700 aa20.05■□□□□ 0.8
LIME1-209ENST00000494776 ZNF541Q9H0D2 1346 aa20.04■□□□□ 0.8
LIME1-209ENST00000494776 VEGFAP15692 232 aaPredicted RBP20.04■□□□□ 0.8
LIME1-209ENST00000494776 ATF7IPQ6VMQ6 1270 aa20.04■□□□□ 0.8
LIME1-209ENST00000494776 TBC1D16Q8TBP0 767 aa20.04■□□□□ 0.8
LIME1-209ENST00000494776 XDHP47989 1333 aa20.03■□□□□ 0.8
LIME1-209ENST00000494776 G3V3G9 751 aa20.03■□□□□ 0.8
LIME1-209ENST00000494776 DCAF8Q5TAQ9 597 aa20.03■□□□□ 0.8
LIME1-209ENST00000494776 ZC3H12CQ9C0D7 883 aaKnown RBP20.03■□□□□ 0.8
LIME1-209ENST00000494776 BICC1Q9H694 974 aaKnown RBP20.03■□□□□ 0.8
LIME1-209ENST00000494776 ZNRF3Q9ULT6 936 aa20.03■□□□□ 0.8
LIME1-209ENST00000494776 MINPP1Q9UNW1 487 aa20.03■□□□□ 0.8
LIME1-209ENST00000494776 GJA3Q9Y6H8 435 aa20.03■□□□□ 0.8
LIME1-209ENST00000494776 UBTFL1P0CB47 393 aaPredicted RBP20.02■□□□□ 0.8
LIME1-209ENST00000494776 TRIM27P14373 513 aa20.02■□□□□ 0.8
LIME1-209ENST00000494776 ATP2B4P23634 1241 aa20.02■□□□□ 0.8
LIME1-209ENST00000494776 ZKSCAN2Q63HK3 967 aa20.02■□□□□ 0.8
LIME1-209ENST00000494776 GPC2Q8N158 579 aa20.01■□□□□ 0.79
LIME1-209ENST00000494776 CLUAP1Q96AJ1 413 aa20.01■□□□□ 0.79
LIME1-209ENST00000494776 KAZALD1Q96I82 304 aa20.01■□□□□ 0.79
LIME1-209ENST00000494776 GPR101Q96P66 508 aaPredicted RBP20.01■□□□□ 0.79
LIME1-209ENST00000494776 ANKRD2Q9GZV1 360 aa20.01■□□□□ 0.79
LIME1-209ENST00000494776 HDAC5Q9UQL6 1122 aa20.01■□□□□ 0.79
LIME1-209ENST00000494776 COL4A5P29400 1685 aa20■□□□□ 0.79
LIME1-209ENST00000494776 DUOX1Q9NRD9 1551 aa20■□□□□ 0.79
LIME1-209ENST00000494776 IQCA1LA6NCM1 817 aa20■□□□□ 0.79
LIME1-209ENST00000494776 TOMM70O94826 608 aa20■□□□□ 0.79
LIME1-209ENST00000494776 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
LIME1-209ENST00000494776 ZNF594Q96JF6 807 aaPredicted RBP20■□□□□ 0.79
LIME1-209ENST00000494776 KCNJ4P48050 445 aa19.99■□□□□ 0.79
LIME1-209ENST00000494776 DOK7Q18PE1 504 aa19.99■□□□□ 0.79
LIME1-209ENST00000494776 LDHAL6AQ6ZMR3 332 aa19.99■□□□□ 0.79
LIME1-209ENST00000494776 DBNDD1Q9H9R9 158 aa19.99■□□□□ 0.79
LIME1-209ENST00000494776 CNNM1Q9NRU3 951 aa19.99■□□□□ 0.79
LIME1-209ENST00000494776 SPEF2Q9C093 1822 aa19.99■□□□□ 0.79
LIME1-209ENST00000494776 RAD17O75943 681 aa19.98■□□□□ 0.79
LIME1-209ENST00000494776 HSPA6P17066 643 aa19.98■□□□□ 0.79
LIME1-209ENST00000494776 CHRNDQ07001 517 aa19.98■□□□□ 0.79
LIME1-209ENST00000494776 RABL6Q3YEC7 729 aaPredicted RBP19.98■□□□□ 0.79
LIME1-209ENST00000494776 FTSJ3Q8IY81 847 aaKnown RBP19.98■□□□□ 0.79
LIME1-209ENST00000494776 L3MBTL3Q96JM7 780 aaPredicted RBP19.98■□□□□ 0.79
LIME1-209ENST00000494776 TNNQ9UQP3 1299 aa19.98■□□□□ 0.79
LIME1-209ENST00000494776 WDR90Q96KV7 1748 aa19.98■□□□□ 0.79
LIME1-209ENST00000494776 POTECB2RU33 542 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 ECE2O60344 883 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 LMOD1P29536 600 aaPredicted RBP19.97■□□□□ 0.79
LIME1-209ENST00000494776 CXCL9Q07325 125 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 TNIP1Q15025 636 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 CIAPIN1Q6FI81 312 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 ANKRD44Q8N8A2 993 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
LIME1-209ENST00000494776 HACL1Q9UJ83 578 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 LEMD3Q9Y2U8 911 aa19.97■□□□□ 0.79
LIME1-209ENST00000494776 PLIN1O60240 522 aa19.96■□□□□ 0.79
LIME1-209ENST00000494776 GNAI3P08754 354 aa19.96■□□□□ 0.79
LIME1-209ENST00000494776 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
LIME1-209ENST00000494776 MEIS3Q99687 375 aa19.96■□□□□ 0.79
LIME1-209ENST00000494776 HELBQ8NG08 1087 aaPredicted RBP19.95■□□□□ 0.78
LIME1-209ENST00000494776 LRRFIP2Q9Y608 721 aaKnown RBP19.95■□□□□ 0.78
LIME1-209ENST00000494776 LTBP1Q14766 1721 aa19.95■□□□□ 0.78
LIME1-209ENST00000494776 ZNF804BA4D1E1 1349 aa19.95■□□□□ 0.78
LIME1-209ENST00000494776 WTIPA6NIX2 430 aaPredicted RBP19.94■□□□□ 0.78
LIME1-209ENST00000494776 YDJCA8MPS7 323 aa19.94■□□□□ 0.78
LIME1-209ENST00000494776 TAF5LO75529 589 aa19.94■□□□□ 0.78
LIME1-209ENST00000494776 DZIP1LQ8IYY4 767 aaKnown RBP19.94■□□□□ 0.78
LIME1-209ENST00000494776 TMEM57Q8N5G2 664 aa19.94■□□□□ 0.78
LIME1-209ENST00000494776 EAPPQ56P03 285 aaPredicted RBP19.93■□□□□ 0.78
LIME1-209ENST00000494776 TAF1DQ9H5J8 278 aaPredicted RBP19.93■□□□□ 0.78
LIME1-209ENST00000494776 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
LIME1-209ENST00000494776 MED23Q9ULK4 1368 aa19.93■□□□□ 0.78
LIME1-209ENST00000494776 EPHX2P34913 555 aa19.92■□□□□ 0.78
LIME1-209ENST00000494776 SMC1BQ8NDV3 1235 aa19.92■□□□□ 0.78
LIME1-209ENST00000494776 PUS3Q9BZE2 481 aaKnown RBP19.92■□□□□ 0.78
LIME1-209ENST00000494776 PSMD14O00487 310 aa19.91■□□□□ 0.78
LIME1-209ENST00000494776 GMPSP49915 693 aaPredicted RBP19.91■□□□□ 0.78
LIME1-209ENST00000494776 FSTL1Q12841 308 aa19.91■□□□□ 0.78
LIME1-209ENST00000494776 ITPRIPQ8IWB1 547 aa19.91■□□□□ 0.78
LIME1-209ENST00000494776 KLHDC4Q8TBB5 520 aa19.91■□□□□ 0.78
LIME1-209ENST00000494776 CLEC11AQ9Y240 323 aa19.91■□□□□ 0.78
LIME1-209ENST00000494776 MS4A1P11836 297 aa19.9■□□□□ 0.78
LIME1-209ENST00000494776 SCNN1DP51172 638 aa19.9■□□□□ 0.78
LIME1-209ENST00000494776 APLP1P51693 650 aa19.9■□□□□ 0.78
LIME1-209ENST00000494776 PODNQ7Z5L7 613 aa19.9■□□□□ 0.78
LIME1-209ENST00000494776 PNMA8AQ86V59 439 aaPredicted RBP19.9■□□□□ 0.78
LIME1-209ENST00000494776 KCNQ5Q9NR82 932 aa19.9■□□□□ 0.78
LIME1-209ENST00000494776 MROH5Q6ZUA9 1318 aa19.9■□□□□ 0.78
LIME1-209ENST00000494776 SCN4AP35499 1836 aa19.9■□□□□ 0.78
LIME1-209ENST00000494776 SNAP23O00161 211 aa19.89■□□□□ 0.77
LIME1-209ENST00000494776 GNAI2P04899 355 aa19.89■□□□□ 0.77
LIME1-209ENST00000494776 EPS15P42566 896 aa19.89■□□□□ 0.77
LIME1-209ENST00000494776 LRRC24Q50LG9 513 aa19.89■□□□□ 0.77
LIME1-209ENST00000494776 METTL24Q5JXM2 366 aa19.89■□□□□ 0.77
LIME1-209ENST00000494776 COA1Q9GZY4 146 aa19.89■□□□□ 0.77
LIME1-209ENST00000494776 RIPOR2Q9Y4F9 1068 aa19.89■□□□□ 0.77
LIME1-209ENST00000494776 KLRK1P26718 216 aa19.88■□□□□ 0.77
LIME1-209ENST00000494776 TXNRD3Q86VQ6 643 aa19.88■□□□□ 0.77
LIME1-209ENST00000494776 FBXW7Q969H0 707 aa19.88■□□□□ 0.77
LIME1-209ENST00000494776 GPRC5DQ9NZD1 345 aa19.88■□□□□ 0.77
LIME1-209ENST00000494776 ZBTB12Q9Y330 459 aaPredicted RBP19.88■□□□□ 0.77
LIME1-209ENST00000494776 RLBP1P12271 317 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms