RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 IL27Q8NEV9 243 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 TNPO1Q92973 898 aaKnown RBP12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 RPAP1Q9BWH6 1393 aaPredicted RBP12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 AFF2P51816 1311 aa12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 KCNQ4P56696 695 aa12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 GJD4Q96KN9 370 aaPredicted RBP12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 RBM8AQ9Y5S9 174 aaKnown RBP12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 EP400Q96L91 3159 aa12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 TAF1P21675 1872 aa12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 BRWD3Q6RI45 1802 aa12.81□□□□□ -0.36
PRPF4B-209ENST00000494674 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 TAF5LO75529 589 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 DEKP35659 375 aaKnown RBP12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 XAGE2Q96GT9 111 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 UTP14AQ9BVJ6 771 aaKnown RBP12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 AKAP2Q9Y2D5 859 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 DOCK2Q92608 1830 aa12.8□□□□□ -0.36
PRPF4B-209ENST00000494674 GOLIM4O00461 696 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 HCLS1P14317 486 aaPredicted RBP12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 SSFA2P28290 1259 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 USPL1Q5W0Q7 1092 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 TM6SF1Q9BZW5 370 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 SLC27A2O14975 620 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 SCARF1Q14162 830 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 ATP2B3Q16720 1220 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 SEC62Q99442 399 aaKnown RBP12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
PRPF4B-209ENST00000494674 RGL2O15211 777 aa12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 IFIT1P09914 478 aaKnown RBP12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 CPA1P15085 419 aa12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 PKP1Q13835 747 aa12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 METTL24Q5JXM2 366 aa12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 CLEC4GQ6UXB4 293 aa12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 CWC22Q9HCG8 908 aaKnown RBP12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
PRPF4B-209ENST00000494674 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 AK2P54819 239 aa12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 ZMYM1Q5SVZ6 1142 aa12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 MEX3CQ5U5Q3 659 aaKnown RBP12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 CCDC129Q6ZRS4 1044 aa12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 RUFY3Q7L099 469 aa12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 UBR3Q6ZT12 1888 aa12.77□□□□□ -0.36
PRPF4B-209ENST00000494674 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 PDE8BO95263 885 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 FGFR2P21802 821 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 MCMDC2Q4G0Z9 681 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 JAKMIP1Q96N16 626 aaKnown RBP12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 CNNM1Q9NRU3 951 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 SEC31BQ9NQW1 1179 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
PRPF4B-209ENST00000494674 MAST3O60307 1309 aa12.75□□□□□ -0.37
PRPF4B-209ENST00000494674 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
PRPF4B-209ENST00000494674 RPS6KA4O75676 772 aa12.75□□□□□ -0.37
PRPF4B-209ENST00000494674 NUCB2P80303 420 aa12.75□□□□□ -0.37
PRPF4B-209ENST00000494674 VPS53Q5VIR6 699 aa12.75□□□□□ -0.37
PRPF4B-209ENST00000494674 PI16Q6UXB8 463 aa12.75□□□□□ -0.37
PRPF4B-209ENST00000494674 TRPC5Q9UL62 973 aaPredicted RBP12.75□□□□□ -0.37
PRPF4B-209ENST00000494674 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 RNF113AO15541 343 aaKnown RBP12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 ZKSCAN1P17029 563 aaPredicted RBP12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 MCAMP43121 646 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 GSE1Q14687 1217 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 SEPT12Q8IYM1 358 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 HMG20BQ9P0W2 317 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 NARFQ9UHQ1 456 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 LARGE1O95461 756 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 ZAP70P43403 619 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms