RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 KCNJ6P48051 423 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
LINC00488-201ENST00000494582 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 PDE11AQ9HCR9 933 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 ANO10Q9NW15 660 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
LINC00488-201ENST00000494582 VWA3AA6NCI4 1184 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 FOSBP53539 338 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 FLIIQ13045 1269 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 IDI1Q13907 227 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 CEP57L1Q8IYX8 460 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 GPR161Q8N6U8 529 aaKnown RBP11.8□□□□□ -0.52
LINC00488-201ENST00000494582 FAM227BQ96M60 508 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 SLC27A2O14975 620 aa11.79□□□□□ -0.52
LINC00488-201ENST00000494582 GNL2Q13823 731 aaKnown RBP11.79□□□□□ -0.52
LINC00488-201ENST00000494582 ZSCAN16Q9H4T2 348 aaPredicted RBP11.79□□□□□ -0.52
LINC00488-201ENST00000494582 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
LINC00488-201ENST00000494582 GOLGA6L1Q8N7Z2 621 aa11.79□□□□□ -0.52
LINC00488-201ENST00000494582 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
LINC00488-201ENST00000494582 SIGLEC1Q9BZZ2 1709 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 ATP1A3P13637 1013 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 CORO7P57737 925 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 POLA2Q14181 598 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 NCAPHQ15003 741 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 DPF2Q92785 391 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
LINC00488-201ENST00000494582 SRRTQ9BXP5 876 aaKnown RBP11.78□□□□□ -0.52
LINC00488-201ENST00000494582 AKAP2Q9Y2D5 859 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 FAN1Q9Y2M0 1017 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 NEDD4P46934 1319 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 CTAGE5O15320 804 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 PPP2R3AQ06190 1150 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 APOBRQ0VD83 1088 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 WWC2Q6AWC2 1192 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 LRRC31Q6UY01 552 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 HSD3B7Q9H2F3 369 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 MRFAP1Q9Y605 127 aa11.78□□□□□ -0.52
LINC00488-201ENST00000494582 PIK3C2BO00750 1634 aa11.77□□□□□ -0.52
LINC00488-201ENST00000494582 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.52
LINC00488-201ENST00000494582 RPS6KB1P23443 525 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 EIF4A2Q14240 407 aaKnown RBP11.77□□□□□ -0.53
LINC00488-201ENST00000494582 GGT6Q6P531 493 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 LEKR1Q6ZMV7 388 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 USP28Q96RU2 1077 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 TSPYL4Q9UJ04 414 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 RCOR1Q9UKL0 485 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 POGZQ7Z3K3 1410 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 RPS6KA5O75582 802 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 TUBB4AP04350 444 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 TPM1P09493 284 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 UBTFL1P0CB47 393 aaPredicted RBP11.77□□□□□ -0.53
LINC00488-201ENST00000494582 MCM6Q14566 821 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 CCDC30Q5VVM6 783 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 MAP4K1Q92918 833 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
LINC00488-201ENST00000494582 BIN1O00499 593 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 KINO60870 393 aaKnown RBP11.76□□□□□ -0.53
LINC00488-201ENST00000494582 IVLP07476 585 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
LINC00488-201ENST00000494582 FAM160A1Q05DH4 1040 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 KIFC2Q96AC6 838 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 DHX58Q96C10 678 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 PPFIA3O75145 1194 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 LMOD1P29536 600 aaPredicted RBP11.76□□□□□ -0.53
LINC00488-201ENST00000494582 PSME1Q06323 249 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 NOM1Q5C9Z4 860 aaKnown RBP11.76□□□□□ -0.53
LINC00488-201ENST00000494582 BEND6Q5SZJ8 279 aaPredicted RBP11.76□□□□□ -0.53
LINC00488-201ENST00000494582 BLOC1S2Q6QNY1 142 aa11.76□□□□□ -0.53
LINC00488-201ENST00000494582 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 NMIQ13287 307 aaPredicted RBP11.75□□□□□ -0.53
LINC00488-201ENST00000494582 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
LINC00488-201ENST00000494582 CCDC73Q6ZRK6 1079 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 FMR1NBQ8N0W7 255 aaPredicted RBP11.75□□□□□ -0.53
LINC00488-201ENST00000494582 RABGGTAQ92696 567 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 PNKPQ96T60 521 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 ANKZF1Q9H8Y5 726 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 CPS1P31327 1500 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 USP42Q9H9J4 1324 aaKnown RBP11.75□□□□□ -0.53
LINC00488-201ENST00000494582 NCKAP5LQ9HCH0 1330 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 GSCP56915 257 aaPredicted RBP11.75□□□□□ -0.53
LINC00488-201ENST00000494582 GNG11P61952 73 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
LINC00488-201ENST00000494582 RUFY2Q8WXA3 655 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 KAT2BQ92831 832 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 CFAP45Q9UL16 551 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 PPP2R2CQ9Y2T4 447 aa11.75□□□□□ -0.53
LINC00488-201ENST00000494582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.75□□□□□ -0.53
LINC00488-201ENST00000494582 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 A0A1B0GVL5 298 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 H3BQV1 296 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
LINC00488-201ENST00000494582 APPP05067 770 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms