RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 DDR2Q16832 855 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 ZNF280DQ6N043 979 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 DDX42Q86XP3 938 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNX13-210ENST00000494402 CNPY4Q8N129 248 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 MYO1HQ8N1T3 1032 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 TTC16Q8NEE8 873 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 CEP63Q96MT8 703 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 C2orf49Q9BVC5 232 aaPredicted RBP8.67□□□□□ -1.02
SNX13-210ENST00000494402 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 CHST12Q9NRB3 414 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 LRFN2Q9ULH4 789 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 WASLO00401 505 aaPredicted RBP8.66□□□□□ -1.02
SNX13-210ENST00000494402 SMAD7O15105 426 aaKnown RBP8.66□□□□□ -1.02
SNX13-210ENST00000494402 ZNF500O60304 480 aaPredicted RBP8.66□□□□□ -1.02
SNX13-210ENST00000494402 SCGB1D2O95969 90 aa8.66□□□□□ -1.02
SNX13-210ENST00000494402 RELL1Q8IUW5 271 aa8.66□□□□□ -1.02
SNX13-210ENST00000494402 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
SNX13-210ENST00000494402 EAF1Q96JC9 268 aaPredicted RBP8.66□□□□□ -1.02
SNX13-210ENST00000494402 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 ASMTLO95671 621 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 POU3F3P20264 500 aaPredicted RBP8.65□□□□□ -1.02
SNX13-210ENST00000494402 EIF4A3P38919 411 aaKnown RBP8.65□□□□□ -1.02
SNX13-210ENST00000494402 ZAP70P43403 619 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 MAPRE1Q15691 268 aaKnown RBP8.65□□□□□ -1.02
SNX13-210ENST00000494402 CT47A1Q5JQC4 288 aaPredicted RBP8.65□□□□□ -1.02
SNX13-210ENST00000494402 FAM26DQ5JW98 314 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 CELF2-AS1Q8N7Q2 184 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 WNT2BQ93097 391 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 PAGR1Q9BTK6 254 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 PRR14Q9BWN1 585 aa8.65□□□□□ -1.02
SNX13-210ENST00000494402 SRRTQ9BXP5 876 aaKnown RBP8.65□□□□□ -1.02
SNX13-210ENST00000494402 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
SNX13-210ENST00000494402 SHTN1A0MZ66 631 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 CFAP69A5D8W1 941 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 RASGRP1O95267 797 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 STAT3P40763 770 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 GDF10P55107 478 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 LRRC41Q15345 812 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 PI16Q6UXB8 463 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 SVIPQ8NHG7 77 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 NT5C1AQ9BXI3 368 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 FAM126AQ9BYI3 521 aaPredicted RBP8.64□□□□□ -1.03
SNX13-210ENST00000494402 CAAP1Q9H8G2 361 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 CD2APQ9Y5K6 639 aa8.64□□□□□ -1.03
SNX13-210ENST00000494402 WASHC2CQ9Y4E1 1318 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 RPLP1P05386 114 aaKnown RBP8.63□□□□□ -1.03
SNX13-210ENST00000494402 COL6A1P12109 1028 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 SOX5P35711 763 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 NFKB2Q00653 900 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 MCL1Q07820 350 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 MTERF2Q49AM1 385 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 AXDND1Q5T1B0 1012 aaPredicted RBP8.63□□□□□ -1.03
SNX13-210ENST00000494402 C10orf62Q5T681 223 aaPredicted RBP8.63□□□□□ -1.03
SNX13-210ENST00000494402 EFCAB2Q5VUJ9 269 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 PCNX4Q63HM2 1172 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 KSR2Q6VAB6 950 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 C14orf80Q86SX3 495 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 CHPFQ8IZ52 775 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 CACTIN-AS1Q8N1I8 211 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 JMYQ8N9B5 988 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 ZNF296Q8WUU4 475 aaPredicted RBP8.63□□□□□ -1.03
SNX13-210ENST00000494402 CCDC74AQ96AQ1 378 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 MFSD3Q96ES6 412 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 ZHX3Q9H4I2 956 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 ENAMQ9NRM1 1142 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 MAPK8IP1Q9UQF2 711 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 CHMP3Q9Y3E7 222 aa8.63□□□□□ -1.03
SNX13-210ENST00000494402 TBX3O15119 743 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 BCAMP50895 628 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 SCNN1DP51172 638 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 C8orf34Q49A92 452 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 TM4SF20Q53R12 229 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 THNSL2Q86YJ6 484 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 EPS8L3Q8TE67 593 aaKnown RBP8.62□□□□□ -1.03
SNX13-210ENST00000494402 RUNDC1Q96C34 613 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 INO80BQ9C086 356 aaPredicted RBP8.62□□□□□ -1.03
SNX13-210ENST00000494402 ST7Q9NRC1 585 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 TSR3Q9UJK0 312 aaKnown RBP8.62□□□□□ -1.03
SNX13-210ENST00000494402 INTUQ9ULD6 942 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 PTCH2Q9Y6C5 1203 aa8.62□□□□□ -1.03
SNX13-210ENST00000494402 MINDY4BA8MYZ0 360 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 TRIM37O94972 964 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 MYCLP1P12525 358 aaPredicted RBP8.61□□□□□ -1.03
SNX13-210ENST00000494402 GBP2P32456 591 aaPredicted RBP8.61□□□□□ -1.03
SNX13-210ENST00000494402 PDE6BP35913 854 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 PSMA6P60900 246 aaKnown RBP8.61□□□□□ -1.03
SNX13-210ENST00000494402 TMEM95Q3KNT9 176 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 ETFBKMTQ8IXQ9 262 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 IFNL3Q8IZI9 196 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 TTC8Q8TAM2 541 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 FBXO41Q8TF61 875 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 SHDQ96IW2 340 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 TMEM74Q96NL1 305 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 ACTR10Q9NZ32 417 aa8.61□□□□□ -1.03
SNX13-210ENST00000494402 SERTAD1Q9UHV2 236 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms