RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 A0A087WZG4 1122 aa19.62■□□□□ 0.73
SYP-208ENST00000494396 CYP19A1P11511 503 aaPredicted RBP19.62■□□□□ 0.73
SYP-208ENST00000494396 TM6SF1Q9BZW5 370 aa19.62■□□□□ 0.73
SYP-208ENST00000494396 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 ERC1Q8IUD2 1116 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 CREBRFQ8IUR6 639 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 PI4K2BQ8TCG2 481 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 ZNF330Q9Y3S2 320 aaPredicted RBP19.61■□□□□ 0.73
SYP-208ENST00000494396 SNX14Q9Y5W7 946 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 COL15A1P39059 1388 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 MAP3K11Q16584 847 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 MEX3CQ5U5Q3 659 aaKnown RBP19.61■□□□□ 0.73
SYP-208ENST00000494396 GIMAP6Q6P9H5 292 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
SYP-208ENST00000494396 JARID2Q92833 1246 aaPredicted RBP19.61■□□□□ 0.73
SYP-208ENST00000494396 CWC25Q9NXE8 425 aaPredicted RBP19.61■□□□□ 0.73
SYP-208ENST00000494396 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
SYP-208ENST00000494396 USP42Q9H9J4 1324 aaKnown RBP19.61■□□□□ 0.73
SYP-208ENST00000494396 FIBPO43427 364 aa19.6■□□□□ 0.73
SYP-208ENST00000494396 AK2P54819 239 aa19.6■□□□□ 0.73
SYP-208ENST00000494396 VPS53Q5VIR6 699 aa19.6■□□□□ 0.73
SYP-208ENST00000494396 PLCB2Q00722 1185 aa19.6■□□□□ 0.73
SYP-208ENST00000494396 NCBP1Q09161 790 aaKnown RBP19.6■□□□□ 0.73
SYP-208ENST00000494396 FOXD4L6Q3SYB3 417 aaPredicted RBP19.6■□□□□ 0.73
SYP-208ENST00000494396 FOXD4L3Q6VB84 417 aaPredicted RBP19.6■□□□□ 0.73
SYP-208ENST00000494396 CNTROBQ8N137 903 aa19.6■□□□□ 0.73
SYP-208ENST00000494396 CCDC191Q8NCU4 936 aa19.6■□□□□ 0.73
SYP-208ENST00000494396 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
SYP-208ENST00000494396 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.59■□□□□ 0.73
SYP-208ENST00000494396 NEMFO60524 1076 aa19.59■□□□□ 0.73
SYP-208ENST00000494396 U2AF2P26368 475 aaKnown RBP eCLIP19.59■□□□□ 0.73
SYP-208ENST00000494396 CLASRPQ8N2M8 674 aaKnown RBP19.59■□□□□ 0.73
SYP-208ENST00000494396 MTMR6Q9Y217 621 aa19.59■□□□□ 0.73
SYP-208ENST00000494396 TTC41PQ6P2S7 1318 aa19.58■□□□□ 0.73
SYP-208ENST00000494396 PDCP20941 246 aa19.58■□□□□ 0.73
SYP-208ENST00000494396 RUFY3Q7L099 469 aa19.58■□□□□ 0.73
SYP-208ENST00000494396 MPNDQ8N594 471 aa19.58■□□□□ 0.73
SYP-208ENST00000494396 RUFY2Q8WXA3 655 aa19.58■□□□□ 0.73
SYP-208ENST00000494396 LSG1Q9H089 658 aaKnown RBP19.58■□□□□ 0.73
SYP-208ENST00000494396 DDX41Q9UJV9 622 aaKnown RBP19.58■□□□□ 0.73
SYP-208ENST00000494396 H7C1W4 665 aa19.58■□□□□ 0.72
SYP-208ENST00000494396 AP5Z1O43299 807 aa19.58■□□□□ 0.72
SYP-208ENST00000494396 CDC25BP30305 580 aa19.58■□□□□ 0.72
SYP-208ENST00000494396 KRT85P78386 507 aa19.58■□□□□ 0.72
SYP-208ENST00000494396 EPHA10Q5JZY3 1008 aa19.58■□□□□ 0.72
SYP-208ENST00000494396 NUP62CLQ9H1M0 184 aa19.58■□□□□ 0.72
SYP-208ENST00000494396 MORC2Q9Y6X9 1032 aaPredicted RBP19.58■□□□□ 0.72
SYP-208ENST00000494396 CASP7P55210 303 aa19.57■□□□□ 0.72
SYP-208ENST00000494396 DDX19AQ9NUU7 478 aaKnown RBP19.57■□□□□ 0.72
SYP-208ENST00000494396 TJP1Q07157 1748 aa19.57■□□□□ 0.72
SYP-208ENST00000494396 TCIRG1Q13488 830 aa19.56■□□□□ 0.72
SYP-208ENST00000494396 RABL6Q3YEC7 729 aaPredicted RBP19.56■□□□□ 0.72
SYP-208ENST00000494396 RBM43Q6ZSC3 357 aaKnown RBP19.56■□□□□ 0.72
SYP-208ENST00000494396 CCDC112Q8NEF3 446 aa19.56■□□□□ 0.72
SYP-208ENST00000494396 SMARCC1Q92922 1105 aaPredicted RBP19.56■□□□□ 0.72
SYP-208ENST00000494396 KCNB2Q92953 911 aa19.56■□□□□ 0.72
SYP-208ENST00000494396 MAP3K15Q6ZN16 1313 aa19.56■□□□□ 0.72
SYP-208ENST00000494396 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
SYP-208ENST00000494396 G3BP1Q13283 466 aaKnown RBP eCLIP19.56■□□□□ 0.72
SYP-208ENST00000494396 ISCA1Q9BUE6 129 aa19.56■□□□□ 0.72
SYP-208ENST00000494396 SCAND2PQ9GZW5 306 aaPredicted RBP19.56■□□□□ 0.72
SYP-208ENST00000494396 ZBTB1Q9Y2K1 713 aa19.56■□□□□ 0.72
SYP-208ENST00000494396 LOC102724428A0A0B4J2F2 783 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 GJB2P29033 226 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 SIK1P57059 783 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 DNM1Q05193 864 aaKnown RBP19.55■□□□□ 0.72
SYP-208ENST00000494396 TYRO3Q06418 890 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 TRIM28Q13263 835 aaKnown RBP19.55■□□□□ 0.72
SYP-208ENST00000494396 PALLDQ8WX93 1383 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 CCDC66A2RUB6 948 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 GLRX3O76003 335 aaKnown RBP19.55■□□□□ 0.72
SYP-208ENST00000494396 SASH1O94885 1247 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 ATP6V1AP38606 617 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 IL6STP40189 918 aaPredicted RBP19.55■□□□□ 0.72
SYP-208ENST00000494396 PLA2G4DQ86XP0 818 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 SPC24Q8NBT2 197 aa19.55■□□□□ 0.72
SYP-208ENST00000494396 TDRD7Q8NHU6 1098 aaKnown RBP19.55■□□□□ 0.72
SYP-208ENST00000494396 KCNQ2O43526 872 aa19.54■□□□□ 0.72
SYP-208ENST00000494396 MAP4K4O95819 1239 aaPredicted RBP19.54■□□□□ 0.72
SYP-208ENST00000494396 PTGS1P23219 599 aa19.54■□□□□ 0.72
SYP-208ENST00000494396 ECHDC1Q9NTX5 307 aa19.54■□□□□ 0.72
SYP-208ENST00000494396 MRVI1Q9Y6F6 885 aa19.54■□□□□ 0.72
SYP-208ENST00000494396 IFIT2P09913 472 aaKnown RBP19.53■□□□□ 0.72
SYP-208ENST00000494396 TNNT1P13805 278 aa19.53■□□□□ 0.72
SYP-208ENST00000494396 ZNF771Q7L3S4 317 aaPredicted RBP19.53■□□□□ 0.72
SYP-208ENST00000494396 AFF2P51816 1311 aa19.53■□□□□ 0.72
SYP-208ENST00000494396 GIGYF2Q6Y7W6 1299 aaKnown RBP19.53■□□□□ 0.72
SYP-208ENST00000494396 AACSQ86V21 672 aa19.53■□□□□ 0.72
SYP-208ENST00000494396 GPATCH3Q96I76 525 aa19.53■□□□□ 0.72
SYP-208ENST00000494396 ZSWIM6Q9HCJ5 1215 aa19.53■□□□□ 0.72
SYP-208ENST00000494396 CYP46A1Q9Y6A2 500 aa19.53■□□□□ 0.72
SYP-208ENST00000494396 THSD7AQ9UPZ6 1657 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 FAM177BA6PVY3 158 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 ZNF75DP51815 510 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 SLFNL1Q499Z3 407 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 HSP90AB3PQ58FF7 597 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 RNF20Q5VTR2 975 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 ZSCAN25Q6NSZ9 544 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 CCDC186Q7Z3E2 898 aa19.52■□□□□ 0.72
SYP-208ENST00000494396 GJD4Q96KN9 370 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms