RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 MST1RQ04912 1400 aa7.74□□□□□ -1.17
PTCD3-219ENST00000494323 SHPRHQ149N8 1683 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 SETD5Q9C0A6 1442 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 SENP3-EIF4A1A0A087X0R7 540 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 A6NJY4 79 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 RHOQP17081 205 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 SSFA2P28290 1259 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 SMTNP53814 917 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 SLC27A3Q5K4L6 730 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 IQGAP3Q86VI3 1631 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 ASXL1Q8IXJ9 1541 aa7.73□□□□□ -1.17
PTCD3-219ENST00000494323 DIP2AQ14689 1571 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 PRMT3O60678 531 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-219ENST00000494323 EPHA4P54764 986 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 MTFR1Q15390 333 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 TLR1Q15399 786 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 TNS4Q8IZW8 715 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 GPR161Q8N6U8 529 aaKnown RBP7.72□□□□□ -1.17
PTCD3-219ENST00000494323 GAS2L2Q8NHY3 880 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 USP21Q9UK80 565 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 HRH3Q9Y5N1 445 aa7.72□□□□□ -1.17
PTCD3-219ENST00000494323 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.17
PTCD3-219ENST00000494323 NRXN3Q9Y4C0 1643 aa7.71□□□□□ -1.17
PTCD3-219ENST00000494323 DCCP43146 1447 aa7.71□□□□□ -1.17
PTCD3-219ENST00000494323 IGFBP4P22692 258 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 WEE1P30291 646 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 XPCQ01831 940 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-219ENST00000494323 OCLNQ16625 522 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 TMCO4Q5TGY1 634 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 VWA5B2Q8N398 1253 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 C1orf216Q8TAB5 229 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 CXXC1Q9P0U4 656 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-219ENST00000494323 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-219ENST00000494323 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.18
PTCD3-219ENST00000494323 ADGRL3Q9HAR2 1447 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 C1orf167Q5SNV9 1468 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 CDK2AP1O14519 115 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 FOXO3O43524 673 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 FOXK2Q01167 660 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 CENPCQ03188 943 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 PHLDB3Q6NSJ2 640 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 PRIMPOLQ96LW4 560 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 CNTNAP3BQ96NU0 1288 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 COL25A1Q9BXS0 654 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-219ENST00000494323 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 STK26Q9P289 416 aa7.7□□□□□ -1.18
PTCD3-219ENST00000494323 XRN1Q8IZH2 1706 aaKnown RBP7.69□□□□□ -1.18
PTCD3-219ENST00000494323 SETBP1Q9Y6X0 1596 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 GTF2E1P29083 439 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-219ENST00000494323 KRT76Q01546 638 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 RGL3Q3MIN7 710 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 WAPLQ7Z5K2 1190 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 RGS22Q8NE09 1264 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 FHDC1Q9C0D6 1143 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-219ENST00000494323 TSPAN10Q9H1Z9 355 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-219ENST00000494323 TRPC5Q9UL62 973 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-219ENST00000494323 MTMR7Q9Y216 660 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 IVNS1ABPQ9Y6Y0 642 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 ATAD2Q6PL18 1390 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 SPHKAPQ2M3C7 1700 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 RGS12O14924 1447 aa7.69□□□□□ -1.18
PTCD3-219ENST00000494323 CDK12Q9NYV4 1490 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-219ENST00000494323 NHSL1Q5SYE7 1610 aa7.68□□□□□ -1.18
PTCD3-219ENST00000494323 ARID4AP29374 1257 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-219ENST00000494323 MFAP1P55081 439 aaKnown RBP7.68□□□□□ -1.18
PTCD3-219ENST00000494323 POU4F2Q12837 409 aa7.68□□□□□ -1.18
PTCD3-219ENST00000494323 SLC9A9Q8IVB4 645 aa7.68□□□□□ -1.18
PTCD3-219ENST00000494323 SCG3Q8WXD2 468 aaKnown RBP7.68□□□□□ -1.18
PTCD3-219ENST00000494323 ZSCAN10Q96SZ4 725 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-219ENST00000494323 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
PTCD3-219ENST00000494323 GNEQ9Y223 722 aaKnown RBP7.68□□□□□ -1.18
PTCD3-219ENST00000494323 NEXMIFQ5QGS0 1516 aa7.68□□□□□ -1.18
PTCD3-219ENST00000494323 CLTCL1P53675 1640 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-219ENST00000494323 LGR5O75473 907 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 PSMA6P60900 246 aaKnown RBP7.67□□□□□ -1.18
PTCD3-219ENST00000494323 TMEM132EQ6IEE7 984 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 TAS1R3Q7RTX0 852 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 NPM2Q86SE8 214 aaKnown RBP7.67□□□□□ -1.18
PTCD3-219ENST00000494323 STAG2Q8N3U4 1231 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 CCER1Q8TC90 406 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-219ENST00000494323 IQSEC3Q9UPP2 1182 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-219ENST00000494323 CHMP3Q9Y3E7 222 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 DYRK1BQ9Y463 629 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 RPGRIP1LQ68CZ1 1315 aa7.67□□□□□ -1.18
PTCD3-219ENST00000494323 NALCNQ8IZF0 1738 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 KIF1BO60333 1816 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 C21orf2O43822 256 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 PTCD1O75127 700 aaKnown RBP7.66□□□□□ -1.18
PTCD3-219ENST00000494323 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 TMEM214Q6NUQ4 689 aaKnown RBP7.66□□□□□ -1.18
PTCD3-219ENST00000494323 NBPF10Q6P3W6 841 aaKnown RBP7.66□□□□□ -1.18
PTCD3-219ENST00000494323 RIPOR1Q6ZS17 1223 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 COL26A1Q96A83 441 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-219ENST00000494323 CUEDC1Q9NWM3 386 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms