RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 ZBTB7CA1YPR0 619 aa10.35□□□□□ -0.75
MSL3-217ENST00000494268 HOXD8P13378 290 aaPredicted RBP10.35□□□□□ -0.75
MSL3-217ENST00000494268 TRIM26Q12899 539 aaPredicted RBP10.35□□□□□ -0.75
MSL3-217ENST00000494268 PCSK7Q16549 785 aa10.35□□□□□ -0.75
MSL3-217ENST00000494268 PSAPL1Q6NUJ1 521 aa10.35□□□□□ -0.75
MSL3-217ENST00000494268 C20orf204Q6ZNR8 217 aa10.35□□□□□ -0.75
MSL3-217ENST00000494268 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
MSL3-217ENST00000494268 CNTNAP5Q8WYK1 1306 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 M0R082 166 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 EREGO14944 169 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 PHACTR2O75167 634 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 CES1P23141 567 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 ORC1Q13415 861 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 ZNF417Q8TAU3 575 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 ZNF587Q96SQ5 575 aaPredicted RBP10.34□□□□□ -0.75
MSL3-217ENST00000494268 ZFYVE28Q9HCC9 887 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 STK17AQ9UEE5 414 aa10.34□□□□□ -0.75
MSL3-217ENST00000494268 PHF20L1A8MW92 1017 aa10.33□□□□□ -0.76
MSL3-217ENST00000494268 EIF2AK2P19525 551 aaKnown RBP10.33□□□□□ -0.76
MSL3-217ENST00000494268 HYAL2Q12891 473 aa10.33□□□□□ -0.76
MSL3-217ENST00000494268 SNX29Q8TEQ0 813 aa10.33□□□□□ -0.76
MSL3-217ENST00000494268 LPIN3Q9BQK8 851 aa10.33□□□□□ -0.76
MSL3-217ENST00000494268 SALL4Q9UJQ4 1053 aa10.33□□□□□ -0.76
MSL3-217ENST00000494268 POLR3DP05423 398 aaPredicted RBP10.32□□□□□ -0.76
MSL3-217ENST00000494268 DGKGP49619 791 aa10.32□□□□□ -0.76
MSL3-217ENST00000494268 USPL1Q5W0Q7 1092 aa10.32□□□□□ -0.76
MSL3-217ENST00000494268 LINC00114Q6XXX2 140 aa10.32□□□□□ -0.76
MSL3-217ENST00000494268 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
MSL3-217ENST00000494268 KIF4AO95239 1232 aa10.31□□□□□ -0.76
MSL3-217ENST00000494268 KANK3Q6NY19 840 aa10.31□□□□□ -0.76
MSL3-217ENST00000494268 ELMSAN1Q6PJG2 1045 aa10.31□□□□□ -0.76
MSL3-217ENST00000494268 NCAPG2Q86XI2 1143 aa10.31□□□□□ -0.76
MSL3-217ENST00000494268 CEP120Q8N960 986 aa10.31□□□□□ -0.76
MSL3-217ENST00000494268 DMRTB1Q96MA1 342 aa10.31□□□□□ -0.76
MSL3-217ENST00000494268 SMG9Q9H0W8 520 aaKnown RBP10.31□□□□□ -0.76
MSL3-217ENST00000494268 JPH1Q9HDC5 661 aaPredicted RBP10.31□□□□□ -0.76
MSL3-217ENST00000494268 RGS9O75916 674 aaPredicted RBP10.3□□□□□ -0.76
MSL3-217ENST00000494268 GHRHP01286 108 aa10.3□□□□□ -0.76
MSL3-217ENST00000494268 ACPPP15309 386 aa10.3□□□□□ -0.76
MSL3-217ENST00000494268 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
MSL3-217ENST00000494268 DSC3Q14574 896 aa10.3□□□□□ -0.76
MSL3-217ENST00000494268 PMEPA1Q969W9 287 aa10.3□□□□□ -0.76
MSL3-217ENST00000494268 PLD4Q96BZ4 506 aa10.3□□□□□ -0.76
MSL3-217ENST00000494268 ASB16Q96NS5 453 aa10.3□□□□□ -0.76
MSL3-217ENST00000494268 TRPA1O75762 1119 aa10.29□□□□□ -0.76
MSL3-217ENST00000494268 ATP11AP98196 1134 aa10.29□□□□□ -0.76
MSL3-217ENST00000494268 PLCB3Q01970 1234 aa10.29□□□□□ -0.76
MSL3-217ENST00000494268 ZSCAN29Q8IWY8 852 aaPredicted RBP10.29□□□□□ -0.76
MSL3-217ENST00000494268 SPACA7Q96KW9 195 aa10.29□□□□□ -0.76
MSL3-217ENST00000494268 TREHO43280 583 aa10.28□□□□□ -0.76
MSL3-217ENST00000494268 LILRB5O75023 590 aa10.28□□□□□ -0.76
MSL3-217ENST00000494268 AFF1P51825 1210 aaKnown RBP10.28□□□□□ -0.76
MSL3-217ENST00000494268 GRIK5Q16478 980 aa10.28□□□□□ -0.76
MSL3-217ENST00000494268 BEND7Q8N7W2 519 aaPredicted RBP10.28□□□□□ -0.76
MSL3-217ENST00000494268 ALKBH8Q96BT7 664 aaKnown RBP10.28□□□□□ -0.76
MSL3-217ENST00000494268 RASSF4Q9H2L5 321 aa10.28□□□□□ -0.76
MSL3-217ENST00000494268 LATS2Q9NRM7 1088 aa10.28□□□□□ -0.76
MSL3-217ENST00000494268 FRRS1LQ9P0K9 344 aa10.28□□□□□ -0.76
MSL3-217ENST00000494268 AMOTL2Q9Y2J4 779 aa10.28□□□□□ -0.76
MSL3-217ENST00000494268 EIF1AYO14602 144 aaKnown RBP10.27□□□□□ -0.77
MSL3-217ENST00000494268 NEFLP07196 543 aa10.27□□□□□ -0.77
MSL3-217ENST00000494268 MKL2Q9ULH7 1088 aa10.27□□□□□ -0.77
MSL3-217ENST00000494268 CPNE3O75131 537 aaKnown RBP10.26□□□□□ -0.77
MSL3-217ENST00000494268 ADAMTSL4Q6UY14 1074 aa10.26□□□□□ -0.77
MSL3-217ENST00000494268 TRIM11Q96F44 468 aa10.26□□□□□ -0.77
MSL3-217ENST00000494268 CSRNP1Q96S65 589 aa10.26□□□□□ -0.77
MSL3-217ENST00000494268 RBSNQ9H1K0 784 aa10.26□□□□□ -0.77
MSL3-217ENST00000494268 PRDM6Q9NQX0 595 aa10.26□□□□□ -0.77
MSL3-217ENST00000494268 CCDC27Q2M243 656 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 PEAR1Q5VY43 1037 aaPredicted RBP10.25□□□□□ -0.77
MSL3-217ENST00000494268 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 GDF6Q6KF10 455 aaPredicted RBP10.25□□□□□ -0.77
MSL3-217ENST00000494268 TTC9Q92623 222 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 SCARF2Q96GP6 870 aaPredicted RBP10.25□□□□□ -0.77
MSL3-217ENST00000494268 HHIPQ96QV1 700 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 PBX4Q9BYU1 374 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 SUV39H2Q9H5I1 410 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 DZANK1Q9NVP4 752 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 TRIM33Q9UPN9 1127 aa10.25□□□□□ -0.77
MSL3-217ENST00000494268 ANKRD33BA6NCL7 494 aa10.24□□□□□ -0.77
MSL3-217ENST00000494268 NFKBIEO00221 500 aa10.24□□□□□ -0.77
MSL3-217ENST00000494268 NID1P14543 1247 aa10.24□□□□□ -0.77
MSL3-217ENST00000494268 DNAJC14Q6Y2X3 702 aaPredicted RBP10.24□□□□□ -0.77
MSL3-217ENST00000494268 PODNQ7Z5L7 613 aa10.24□□□□□ -0.77
MSL3-217ENST00000494268 GALNT12Q8IXK2 581 aa10.24□□□□□ -0.77
MSL3-217ENST00000494268 EDN3P14138 238 aa10.23□□□□□ -0.77
MSL3-217ENST00000494268 MAPK8P45983 427 aa10.23□□□□□ -0.77
MSL3-217ENST00000494268 CCDC74AQ96AQ1 378 aa10.23□□□□□ -0.77
MSL3-217ENST00000494268 POP1Q99575 1024 aaKnown RBP10.23□□□□□ -0.77
MSL3-217ENST00000494268 OSMRQ99650 979 aa10.23□□□□□ -0.77
MSL3-217ENST00000494268 ZKSCAN3Q9BRR0 538 aa10.23□□□□□ -0.77
MSL3-217ENST00000494268 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
MSL3-217ENST00000494268 GNB5O14775 395 aa10.22□□□□□ -0.77
MSL3-217ENST00000494268 IRS1P35568 1242 aa10.22□□□□□ -0.77
MSL3-217ENST00000494268 SETDB2Q96T68 719 aa10.22□□□□□ -0.77
MSL3-217ENST00000494268 DNAJC25Q9H1X3 360 aa10.22□□□□□ -0.77
MSL3-217ENST00000494268 WWC3Q9ULE0 1092 aa10.22□□□□□ -0.77
MSL3-217ENST00000494268 PNMA6FA0A0J9YX94 578 aa10.21□□□□□ -0.77
MSL3-217ENST00000494268 SMNDC1O75940 238 aaKnown RBP eCLIP10.21□□□□□ -0.77
MSL3-217ENST00000494268 P4HBP07237 508 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms