RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 RTN1Q16799 776 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 MSMPQ1L6U9 139 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 ACAD11Q709F0 780 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 MAP4K3Q8IVH8 894 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 CHMP7Q8WUX9 453 aaPredicted RBP5.21□□□□□ -1.58
PTPN12-212ENST00000494248 SCG3Q8WXD2 468 aaKnown RBP5.21□□□□□ -1.58
PTPN12-212ENST00000494248 FAM83CQ9BQN1 747 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 PRM3Q9NNZ6 103 aa5.21□□□□□ -1.58
PTPN12-212ENST00000494248 LINC01387J3KSC0 135 aa5.2□□□□□ -1.58
PTPN12-212ENST00000494248 UVSSAQ2YD98 709 aa5.2□□□□□ -1.58
PTPN12-212ENST00000494248 TXNDC11Q6PKC3 985 aa5.2□□□□□ -1.58
PTPN12-212ENST00000494248 CLEC10AQ8IUN9 316 aa5.2□□□□□ -1.58
PTPN12-212ENST00000494248 SHISA5Q8N114 240 aa5.2□□□□□ -1.58
PTPN12-212ENST00000494248 NSUN5Q96P11 429 aaKnown RBP5.2□□□□□ -1.58
PTPN12-212ENST00000494248 CEP41Q9BYV8 373 aa5.2□□□□□ -1.58
PTPN12-212ENST00000494248 CCDC39Q9UFE4 941 aa5.2□□□□□ -1.58
PTPN12-212ENST00000494248 OPLAHO14841 1288 aa5.19□□□□□ -1.58
PTPN12-212ENST00000494248 DDX3YO15523 660 aaKnown RBP5.19□□□□□ -1.58
PTPN12-212ENST00000494248 CD68P34810 354 aaPredicted RBP5.19□□□□□ -1.58
PTPN12-212ENST00000494248 NEUROD2Q15784 382 aa5.19□□□□□ -1.58
PTPN12-212ENST00000494248 TRIM50Q86XT4 487 aa5.19□□□□□ -1.58
PTPN12-212ENST00000494248 PIM2Q9P1W9 311 aa5.19□□□□□ -1.58
PTPN12-212ENST00000494248 MMP20O60882 483 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 ADAM11O75078 769 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 LGR5O75473 907 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 BMP3P12645 472 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 EPB42P16452 691 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 RASA1P20936 1047 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 BEND4Q6ZU67 534 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 OGFOD1Q8N543 542 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 FOXD4L4Q8WXT5 416 aaPredicted RBP5.18□□□□□ -1.58
PTPN12-212ENST00000494248 MFSD14AQ96MC6 490 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 CARD10Q9BWT7 1032 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 PPME1Q9Y570 386 aa5.18□□□□□ -1.58
PTPN12-212ENST00000494248 PRNPP04156 253 aa5.17□□□□□ -1.58
PTPN12-212ENST00000494248 PREPP48147 710 aa5.17□□□□□ -1.58
PTPN12-212ENST00000494248 ARSDP51689 593 aa5.17□□□□□ -1.58
PTPN12-212ENST00000494248 SIX5Q8N196 739 aa5.17□□□□□ -1.58
PTPN12-212ENST00000494248 LARGE2Q8N3Y3 721 aa5.17□□□□□ -1.58
PTPN12-212ENST00000494248 UBASH3BQ8TF42 649 aa5.17□□□□□ -1.58
PTPN12-212ENST00000494248 C11orf16Q9NQ32 467 aa5.17□□□□□ -1.58
PTPN12-212ENST00000494248 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
PTPN12-212ENST00000494248 USP17L3A6NCW0 530 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 USP17L4A6NCW7 530 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 MICAL2O94851 1124 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 PAPLNO95428 1278 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 EGFRP00533 1210 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 F13BP05160 661 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 HOXD8P13378 290 aaPredicted RBP5.16□□□□□ -1.58
PTPN12-212ENST00000494248 JUNBP17275 347 aaPredicted RBP5.16□□□□□ -1.58
PTPN12-212ENST00000494248 ATP1A2P50993 1020 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 DGKZQ13574 1117 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 USP17L2Q6R6M4 530 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.16□□□□□ -1.58
PTPN12-212ENST00000494248 USP17L1Q7RTZ2 530 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 PLEKHM2Q8IWE5 1019 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 ZNF594Q96JF6 807 aaPredicted RBP5.16□□□□□ -1.58
PTPN12-212ENST00000494248 KCNF1Q9H3M0 494 aa5.16□□□□□ -1.58
PTPN12-212ENST00000494248 ANGEL1Q9UNK9 670 aaKnown RBP5.16□□□□□ -1.58
PTPN12-212ENST00000494248 RTCBQ9Y3I0 505 aaKnown RBP5.16□□□□□ -1.58
PTPN12-212ENST00000494248 PALM3A6NDB9 673 aaPredicted RBP5.15□□□□□ -1.59
PTPN12-212ENST00000494248 XYLBO75191 536 aa5.15□□□□□ -1.59
PTPN12-212ENST00000494248 GHRHP01286 108 aa5.15□□□□□ -1.59
PTPN12-212ENST00000494248 CDC25BP30305 580 aa5.15□□□□□ -1.59
PTPN12-212ENST00000494248 PKN1Q16512 942 aa5.15□□□□□ -1.59
PTPN12-212ENST00000494248 COL13A1Q5TAT6 717 aaPredicted RBP5.15□□□□□ -1.59
PTPN12-212ENST00000494248 DCAF11Q8TEB1 546 aa5.15□□□□□ -1.59
PTPN12-212ENST00000494248 CARMIL2Q6F5E8 1435 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 FOSL1P15407 271 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 ATP11AP98196 1134 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 DUOXA2Q1HG44 320 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 TP53INP2Q8IXH6 220 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 ADAMTS19Q8TE59 1207 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 UCN2Q96RP3 112 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 LACRTQ9GZZ8 138 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 QTRT2Q9H974 415 aaKnown RBP5.14□□□□□ -1.59
PTPN12-212ENST00000494248 KCNMB2Q9Y691 235 aa5.14□□□□□ -1.59
PTPN12-212ENST00000494248 FSCN2O14926 492 aa5.13□□□□□ -1.59
PTPN12-212ENST00000494248 PSAPP07602 524 aa5.13□□□□□ -1.59
PTPN12-212ENST00000494248 ARID4AP29374 1257 aaPredicted RBP5.13□□□□□ -1.59
PTPN12-212ENST00000494248 FBXL6Q8N531 539 aa5.13□□□□□ -1.59
PTPN12-212ENST00000494248 KLHDC7BQ96G42 594 aa5.13□□□□□ -1.59
PTPN12-212ENST00000494248 MUC3BQ9H195 1237 aa5.13□□□□□ -1.59
PTPN12-212ENST00000494248 PAK6Q9NQU5 681 aaPredicted RBP5.13□□□□□ -1.59
PTPN12-212ENST00000494248 MKRN1Q9UHC7 482 aaKnown RBP5.13□□□□□ -1.59
PTPN12-212ENST00000494248 RAPGEFL1Q9UHV5 662 aa5.13□□□□□ -1.59
PTPN12-212ENST00000494248 LEMD3Q9Y2U8 911 aa5.13□□□□□ -1.59
PTPN12-212ENST00000494248 SOX18P35713 384 aa5.12□□□□□ -1.59
PTPN12-212ENST00000494248 VSIG10LQ86VR7 867 aa5.12□□□□□ -1.59
PTPN12-212ENST00000494248 FBXL18Q96ME1 805 aa5.12□□□□□ -1.59
PTPN12-212ENST00000494248 SGO2Q562F6 1265 aa5.11□□□□□ -1.59
PTPN12-212ENST00000494248 TTLL10Q6ZVT0 673 aa5.11□□□□□ -1.59
PTPN12-212ENST00000494248 RGL4Q8IZJ4 473 aa5.11□□□□□ -1.59
PTPN12-212ENST00000494248 CMTR1Q8N1G2 835 aaKnown RBP5.11□□□□□ -1.59
PTPN12-212ENST00000494248 CACTIN-AS1Q8N1I8 211 aa5.11□□□□□ -1.59
PTPN12-212ENST00000494248 SH2B1Q9NRF2 756 aaPredicted RBP5.11□□□□□ -1.59
PTPN12-212ENST00000494248 COG6Q9Y2V7 657 aa5.11□□□□□ -1.59
PTPN12-212ENST00000494248 EPHA1P21709 976 aa5.1□□□□□ -1.59
PTPN12-212ENST00000494248 MAP4P27816 1152 aaKnown RBP5.1□□□□□ -1.59
PTPN12-212ENST00000494248 CDC27P30260 824 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms