RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
TRA2B-216ENST00000493864 SLC4A9Q96Q91 983 aa8.96□□□□□ -0.98
TRA2B-216ENST00000493864 HRH3Q9Y5N1 445 aa8.96□□□□□ -0.98
TRA2B-216ENST00000493864 ADGRL3Q9HAR2 1447 aa8.96□□□□□ -0.98
TRA2B-216ENST00000493864 TMEM88BA6NKF7 163 aa8.95□□□□□ -0.98
TRA2B-216ENST00000493864 M0R2N6 131 aa8.95□□□□□ -0.98
TRA2B-216ENST00000493864 SLC27A3Q5K4L6 730 aa8.95□□□□□ -0.98
TRA2B-216ENST00000493864 MSH6P52701 1360 aa8.95□□□□□ -0.98
TRA2B-216ENST00000493864 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
TRA2B-216ENST00000493864 ADGRB2O60241 1585 aa8.95□□□□□ -0.98
TRA2B-216ENST00000493864 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-216ENST00000493864 A6NJY4 79 aa8.94□□□□□ -0.98
TRA2B-216ENST00000493864 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
TRA2B-216ENST00000493864 TTLL8A6PVC2 850 aa8.94□□□□□ -0.98
TRA2B-216ENST00000493864 ATF3P18847 181 aa8.94□□□□□ -0.98
TRA2B-216ENST00000493864 RNF144AP50876 292 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-216ENST00000493864 CNGB1Q14028 1251 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-216ENST00000493864 SWI5Q1ZZU3 235 aa8.94□□□□□ -0.98
TRA2B-216ENST00000493864 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-216ENST00000493864 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-216ENST00000493864 FHDC1Q9C0D6 1143 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-216ENST00000493864 USTQ9Y2C2 406 aa8.94□□□□□ -0.98
TRA2B-216ENST00000493864 NCOA3Q9Y6Q9 1424 aa8.94□□□□□ -0.98
TRA2B-216ENST00000493864 LCE2BO14633 110 aa8.93□□□□□ -0.98
TRA2B-216ENST00000493864 GTF2E1P29083 439 aaPredicted RBP8.93□□□□□ -0.98
TRA2B-216ENST00000493864 GPC1P35052 558 aa8.93□□□□□ -0.98
TRA2B-216ENST00000493864 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
TRA2B-216ENST00000493864 PMFBP1Q8TBY8 1022 aa8.93□□□□□ -0.98
TRA2B-216ENST00000493864 RNF217Q8TC41 542 aa8.93□□□□□ -0.98
TRA2B-216ENST00000493864 ORAI2Q96SN7 254 aa8.93□□□□□ -0.98
TRA2B-216ENST00000493864 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
TRA2B-216ENST00000493864 MED1Q15648 1581 aaPredicted RBP8.93□□□□□ -0.98
TRA2B-216ENST00000493864 MYOM1P52179 1685 aa8.92□□□□□ -0.98
TRA2B-216ENST00000493864 ATP7BP35670 1465 aa8.92□□□□□ -0.98
TRA2B-216ENST00000493864 PPIP5K1Q6PFW1 1433 aa8.92□□□□□ -0.98
TRA2B-216ENST00000493864 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
TRA2B-216ENST00000493864 EPHA4P54764 986 aa8.92□□□□□ -0.98
TRA2B-216ENST00000493864 MTFR1Q15390 333 aa8.92□□□□□ -0.98
TRA2B-216ENST00000493864 TMEM214Q6NUQ4 689 aaKnown RBP8.92□□□□□ -0.98
TRA2B-216ENST00000493864 HDGFL2Q7Z4V5 671 aaPredicted RBP8.92□□□□□ -0.98
TRA2B-216ENST00000493864 GRIP2Q9C0E4 1043 aa8.92□□□□□ -0.98
TRA2B-216ENST00000493864 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
TRA2B-216ENST00000493864 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
TRA2B-216ENST00000493864 KNSTRNQ9Y448 316 aa8.92□□□□□ -0.98
TRA2B-216ENST00000493864 FMN2Q9NZ56 1722 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 COL16A1Q07092 1604 aaPredicted RBP8.91□□□□□ -0.98
TRA2B-216ENST00000493864 USP32Q8NFA0 1604 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 CDC42BPGQ6DT37 1551 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 CD163L1Q9NR16 1453 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 ANKARQ7Z5J8 1434 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 ACEP12821 1306 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 PRMT3O60678 531 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 PDE4CQ08493 712 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 PRICKLE2Q7Z3G6 844 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 SLC9A9Q8IVB4 645 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 NGDNQ8NEJ9 315 aaKnown RBP8.91□□□□□ -0.98
TRA2B-216ENST00000493864 GAS2L2Q8NHY3 880 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 SCG3Q8WXD2 468 aaKnown RBP8.91□□□□□ -0.98
TRA2B-216ENST00000493864 PRIMPOLQ96LW4 560 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 GMPR2Q9P2T1 348 aaKnown RBP8.91□□□□□ -0.98
TRA2B-216ENST00000493864 USP3Q9Y6I4 520 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 NHSL1Q5SYE7 1610 aa8.91□□□□□ -0.98
TRA2B-216ENST00000493864 A0A1W2PP64 1363 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 ANKRD36BQ8N2N9 1353 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 NINLQ9Y2I6 1382 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 CDK2AP1O14519 115 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 CLP1Q92989 425 aaKnown RBP8.9□□□□□ -0.98
TRA2B-216ENST00000493864 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 SLAIN2Q9P270 581 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 DNMT3LQ9UJW3 386 aa8.9□□□□□ -0.98
TRA2B-216ENST00000493864 C1orf167Q5SNV9 1468 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 MST1RQ04912 1400 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 CPSF1Q10570 1443 aaKnown RBP8.89□□□□□ -0.99
TRA2B-216ENST00000493864 KTN1Q86UP2 1357 aaKnown RBP8.89□□□□□ -0.99
TRA2B-216ENST00000493864 SOBPA7XYQ1 873 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 ANP32CO43423 234 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 MAN1A2O60476 641 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 PDIA4P13667 645 aaKnown RBP8.89□□□□□ -0.99
TRA2B-216ENST00000493864 FOXK2Q01167 660 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 GNASQ5JWF2 1037 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 CC2D1BQ5T0F9 858 aaKnown RBP8.89□□□□□ -0.99
TRA2B-216ENST00000493864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRA2B-216ENST00000493864 NBPF15Q8N660 670 aa8.89□□□□□ -0.99
TRA2B-216ENST00000493864 IQSEC3Q9UPP2 1182 aaPredicted RBP8.89□□□□□ -0.99
TRA2B-216ENST00000493864 DCCP43146 1447 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 NSD3Q9BZ95 1437 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 FOXO3O43524 673 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 RHOQP17081 205 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 ATP2B4P23634 1241 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 POU4F2Q12837 409 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 RHBDD1Q8TEB9 315 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
TRA2B-216ENST00000493864 PRKRIP1Q9H875 184 aaPredicted RBP8.88□□□□□ -0.99
TRA2B-216ENST00000493864 POLR3AO14802 1390 aaPredicted RBP8.87□□□□□ -0.99
TRA2B-216ENST00000493864 AHDC1Q5TGY3 1603 aaPredicted RBP8.87□□□□□ -0.99
TRA2B-216ENST00000493864 FYB1O15117 783 aa8.87□□□□□ -0.99
TRA2B-216ENST00000493864 C21orf2O43822 256 aa8.87□□□□□ -0.99
TRA2B-216ENST00000493864 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
TRA2B-216ENST00000493864 WEE1P30291 646 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms