RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 GREM2Q9H772 168 aa28.12■■■□□ 2.09
HLA-E-203ENST00000493699 TMEM88BA6NKF7 163 aa28.11■■■□□ 2.09
HLA-E-203ENST00000493699 CDC5LQ99459 802 aaKnown RBP28.11■■■□□ 2.09
HLA-E-203ENST00000493699 ANKIB1Q9P2G1 1089 aa28.11■■■□□ 2.09
HLA-E-203ENST00000493699 BCL2L13Q9BXK5 485 aa28.1■■■□□ 2.09
HLA-E-203ENST00000493699 ZC3H12CQ9C0D7 883 aaKnown RBP28.1■■■□□ 2.09
HLA-E-203ENST00000493699 KCNQ5Q9NR82 932 aa28.1■■■□□ 2.09
HLA-E-203ENST00000493699 GGA1Q9UJY5 639 aa28.1■■■□□ 2.09
HLA-E-203ENST00000493699 PSMD14O00487 310 aa28.09■■■□□ 2.09
HLA-E-203ENST00000493699 UFL1O94874 794 aa28.09■■■□□ 2.09
HLA-E-203ENST00000493699 DOK7Q18PE1 504 aa28.09■■■□□ 2.09
HLA-E-203ENST00000493699 BSDC1Q9NW68 430 aaPredicted RBP28.09■■■□□ 2.09
HLA-E-203ENST00000493699 MYH3P11055 1940 aa28.08■■■□□ 2.09
HLA-E-203ENST00000493699 F6X3S4 739 aa28.08■■■□□ 2.09
HLA-E-203ENST00000493699 ECE2O60344 883 aa28.08■■■□□ 2.09
HLA-E-203ENST00000493699 CSF1RP07333 972 aa28.08■■■□□ 2.09
HLA-E-203ENST00000493699 BEND3Q5T5X7 828 aa28.08■■■□□ 2.09
HLA-E-203ENST00000493699 DPF2Q92785 391 aa28.08■■■□□ 2.09
HLA-E-203ENST00000493699 MKRN1Q9UHC7 482 aaKnown RBP28.08■■■□□ 2.09
HLA-E-203ENST00000493699 PGAP2Q9UHJ9 254 aa28.08■■■□□ 2.09
HLA-E-203ENST00000493699 CNOT7Q9UIV1 285 aaKnown RBP28.08■■■□□ 2.09
HLA-E-203ENST00000493699 ZBTB12Q9Y330 459 aaPredicted RBP28.08■■■□□ 2.09
HLA-E-203ENST00000493699 XDHP47989 1333 aa28.07■■■□□ 2.08
HLA-E-203ENST00000493699 HIRAP54198 1017 aaPredicted RBP28.06■■■□□ 2.08
HLA-E-203ENST00000493699 MINPP1Q9UNW1 487 aa28.06■■■□□ 2.08
HLA-E-203ENST00000493699 CNTNAP1P78357 1384 aa28.06■■■□□ 2.08
HLA-E-203ENST00000493699 SHTN1A0MZ66 631 aa28.05■■■□□ 2.08
HLA-E-203ENST00000493699 WTIPA6NIX2 430 aaPredicted RBP28.04■■■□□ 2.08
HLA-E-203ENST00000493699 ATP2B4P23634 1241 aa28.04■■■□□ 2.08
HLA-E-203ENST00000493699 FMR1Q06787 632 aaKnown RBP eCLIP28.04■■■□□ 2.08
HLA-E-203ENST00000493699 MICALL2Q8IY33 904 aa28.03■■■□□ 2.08
HLA-E-203ENST00000493699 TRPM4Q8TD43 1214 aa28.03■■■□□ 2.08
HLA-E-203ENST00000493699 ZC3H15Q8WU90 426 aaKnown RBP28.03■■■□□ 2.08
HLA-E-203ENST00000493699 H7C1D1 291 aa28.02■■■□□ 2.08
HLA-E-203ENST00000493699 VIL1P09327 827 aaKnown RBP28.02■■■□□ 2.08
HLA-E-203ENST00000493699 ITGA6P23229 1130 aa28.02■■■□□ 2.08
HLA-E-203ENST00000493699 RPS12P25398 132 aaKnown RBP28.02■■■□□ 2.08
HLA-E-203ENST00000493699 SCN9AQ15858 1988 aa28.01■■■□□ 2.07
HLA-E-203ENST00000493699 TRAF5O00463 557 aa28.01■■■□□ 2.07
HLA-E-203ENST00000493699 FAM161AQ3B820 660 aa28.01■■■□□ 2.07
HLA-E-203ENST00000493699 RASSF10A6NK89 507 aa28■■■□□ 2.07
HLA-E-203ENST00000493699 E9PSI1 815 aa28■■■□□ 2.07
HLA-E-203ENST00000493699 FOXO4P98177 505 aa28■■■□□ 2.07
HLA-E-203ENST00000493699 CST9Q5W186 159 aa28■■■□□ 2.07
HLA-E-203ENST00000493699 IGHMBP2P38935 993 aaKnown RBP27.99■■■□□ 2.07
HLA-E-203ENST00000493699 SLFN5Q08AF3 891 aa27.99■■■□□ 2.07
HLA-E-203ENST00000493699 G3V3G9 751 aa27.98■■■□□ 2.07
HLA-E-203ENST00000493699 VEGFBP49765 207 aa27.98■■■□□ 2.07
HLA-E-203ENST00000493699 CCT4P50991 539 aaKnown RBP27.98■■■□□ 2.07
HLA-E-203ENST00000493699 DCAF8Q5TAQ9 597 aa27.98■■■□□ 2.07
HLA-E-203ENST00000493699 SAMD7Q7Z3H4 446 aa27.98■■■□□ 2.07
HLA-E-203ENST00000493699 CCER2I3L3R5 266 aa27.97■■■□□ 2.07
HLA-E-203ENST00000493699 EGFRP00533 1210 aa27.97■■■□□ 2.07
HLA-E-203ENST00000493699 HSPA1AP0DMV8 641 aaKnown RBP27.97■■■□□ 2.07
HLA-E-203ENST00000493699 HSPA1BP0DMV9 641 aaKnown RBP27.97■■■□□ 2.07
HLA-E-203ENST00000493699 PODNQ7Z5L7 613 aa27.97■■■□□ 2.07
HLA-E-203ENST00000493699 MED23Q9ULK4 1368 aa27.97■■■□□ 2.07
HLA-E-203ENST00000493699 GRM8O00222 908 aa27.96■■■□□ 2.07
HLA-E-203ENST00000493699 DEFB115Q30KQ5 88 aa27.96■■■□□ 2.07
HLA-E-203ENST00000493699 MRPL50Q8N5N7 158 aaKnown RBP27.96■■■□□ 2.07
HLA-E-203ENST00000493699 GLIS2Q9BZE0 524 aaPredicted RBP27.96■■■□□ 2.07
HLA-E-203ENST00000493699 LEMD3Q9Y2U8 911 aa27.96■■■□□ 2.07
HLA-E-203ENST00000493699 SPEF2Q9C093 1822 aa27.96■■■□□ 2.07
HLA-E-203ENST00000493699 ALDH1L1O75891 902 aa27.95■■■□□ 2.06
HLA-E-203ENST00000493699 IFFO2Q5TF58 517 aa27.95■■■□□ 2.06
HLA-E-203ENST00000493699 MPHOSPH8Q99549 860 aa27.95■■■□□ 2.06
HLA-E-203ENST00000493699 ZNF609O15014 1411 aa27.94■■■□□ 2.06
HLA-E-203ENST00000493699 ANKRD18BA2A2Z9 1011 aa27.94■■■□□ 2.06
HLA-E-203ENST00000493699 TBC1D10BQ4KMP7 808 aaPredicted RBP27.94■■■□□ 2.06
HLA-E-203ENST00000493699 EPHA10Q5JZY3 1008 aa27.94■■■□□ 2.06
HLA-E-203ENST00000493699 RSBN1LQ6PCB5 846 aaPredicted RBP27.94■■■□□ 2.06
HLA-E-203ENST00000493699 CDC37L1Q7L3B6 337 aa27.94■■■□□ 2.06
HLA-E-203ENST00000493699 SRCIN1Q9C0H9 1055 aa27.94■■■□□ 2.06
HLA-E-203ENST00000493699 SLC4A10Q6U841 1118 aa27.93■■■□□ 2.06
HLA-E-203ENST00000493699 TXNRD3Q86VQ6 643 aa27.93■■■□□ 2.06
HLA-E-203ENST00000493699 TRMT2AQ8IZ69 625 aaKnown RBP27.93■■■□□ 2.06
HLA-E-203ENST00000493699 AGBL3Q8NEM8 1001 aa27.93■■■□□ 2.06
HLA-E-203ENST00000493699 CDCA7LQ96GN5 454 aa27.93■■■□□ 2.06
HLA-E-203ENST00000493699 GMLQ99445 158 aa27.93■■■□□ 2.06
HLA-E-203ENST00000493699 ANKRD2Q9GZV1 360 aa27.93■■■□□ 2.06
HLA-E-203ENST00000493699 ABT1Q9ULW3 272 aaKnown RBP27.93■■■□□ 2.06
HLA-E-203ENST00000493699 TRPM7Q96QT4 1865 aa27.93■■■□□ 2.06
HLA-E-203ENST00000493699 LMBR1LQ6UX01 489 aa27.92■■■□□ 2.06
HLA-E-203ENST00000493699 C9orf78Q9NZ63 289 aaPredicted RBP27.92■■■□□ 2.06
HLA-E-203ENST00000493699 PSME4Q14997 1843 aa27.91■■■□□ 2.06
HLA-E-203ENST00000493699 USP17L3A6NCW0 530 aa27.91■■■□□ 2.06
HLA-E-203ENST00000493699 USP17L4A6NCW7 530 aa27.91■■■□□ 2.06
HLA-E-203ENST00000493699 ZNF280AP59817 542 aaPredicted RBP27.91■■■□□ 2.06
HLA-E-203ENST00000493699 CHRNDQ07001 517 aa27.91■■■□□ 2.06
HLA-E-203ENST00000493699 IFIT5Q13325 482 aaKnown RBP27.91■■■□□ 2.06
HLA-E-203ENST00000493699 USP17L1Q7RTZ2 530 aa27.91■■■□□ 2.06
HLA-E-203ENST00000493699 SSH1Q8WYL5 1049 aa27.91■■■□□ 2.06
HLA-E-203ENST00000493699 ZNF804BA4D1E1 1349 aa27.91■■■□□ 2.06
HLA-E-203ENST00000493699 RBM26Q5T8P6 1007 aaKnown RBP27.9■■■□□ 2.06
HLA-E-203ENST00000493699 COL13A1Q5TAT6 717 aaPredicted RBP27.9■■■□□ 2.06
HLA-E-203ENST00000493699 TLL2Q9Y6L7 1015 aa27.9■■■□□ 2.06
HLA-E-203ENST00000493699 CELF2O95319 508 aaKnown RBP27.89■■■□□ 2.06
HLA-E-203ENST00000493699 COA1Q9GZY4 146 aa27.89■■■□□ 2.06
HLA-E-203ENST00000493699 UTYO14607 1347 aa27.89■■■□□ 2.05
HLA-E-203ENST00000493699 WDR33Q9C0J8 1336 aaKnown RBP27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms