RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 FPGT-TNNI3KV9GXZ4 949 aa15.57■□□□□ 0.08
VPS52-220ENST00000493674 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
VPS52-220ENST00000493674 MSH5O43196 834 aa15.56■□□□□ 0.08
VPS52-220ENST00000493674 MMP10P09238 476 aa15.56■□□□□ 0.08
VPS52-220ENST00000493674 GSPT1P15170 499 aaKnown RBP15.56■□□□□ 0.08
VPS52-220ENST00000493674 C8orf34Q49A92 452 aa15.56■□□□□ 0.08
VPS52-220ENST00000493674 TAF7LQ5H9L4 462 aa15.56■□□□□ 0.08
VPS52-220ENST00000493674 PI4K2BQ8TCG2 481 aa15.56■□□□□ 0.08
VPS52-220ENST00000493674 SGIP1Q9BQI5 828 aa15.56■□□□□ 0.08
VPS52-220ENST00000493674 SLX4Q8IY92 1834 aa15.56■□□□□ 0.08
VPS52-220ENST00000493674 C10orf71Q711Q0 1435 aa15.55■□□□□ 0.08
VPS52-220ENST00000493674 PTGER2P43116 358 aa15.55■□□□□ 0.08
VPS52-220ENST00000493674 LDHAL6AQ6ZMR3 332 aa15.55■□□□□ 0.08
VPS52-220ENST00000493674 AACSQ86V21 672 aa15.55■□□□□ 0.08
VPS52-220ENST00000493674 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
VPS52-220ENST00000493674 CDC5LQ99459 802 aaKnown RBP15.55■□□□□ 0.08
VPS52-220ENST00000493674 MROH5Q6ZUA9 1318 aa15.54■□□□□ 0.08
VPS52-220ENST00000493674 POLD1P28340 1107 aa15.54■□□□□ 0.08
VPS52-220ENST00000493674 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
VPS52-220ENST00000493674 TLR7Q9NYK1 1049 aaKnown RBP15.54■□□□□ 0.08
VPS52-220ENST00000493674 DBNLQ9UJU6 430 aaKnown RBP15.54■□□□□ 0.08
VPS52-220ENST00000493674 CCDC88AQ3V6T2 1871 aa15.53■□□□□ 0.08
VPS52-220ENST00000493674 IFIT2P09913 472 aaKnown RBP15.53■□□□□ 0.08
VPS52-220ENST00000493674 IGHMBP2P38935 993 aaKnown RBP15.53■□□□□ 0.08
VPS52-220ENST00000493674 MSL1Q68DK7 614 aa15.53■□□□□ 0.08
VPS52-220ENST00000493674 CELF1Q92879 486 aaKnown RBP15.53■□□□□ 0.08
VPS52-220ENST00000493674 BRIP1Q9BX63 1249 aa15.53■□□□□ 0.08
VPS52-220ENST00000493674 BACH2Q9BYV9 841 aa15.53■□□□□ 0.08
VPS52-220ENST00000493674 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
VPS52-220ENST00000493674 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
VPS52-220ENST00000493674 CEP126Q9P2H0 1117 aa15.53■□□□□ 0.08
VPS52-220ENST00000493674 PPP1R1BQ9UD71 204 aaPredicted RBP15.53■□□□□ 0.08
VPS52-220ENST00000493674 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
VPS52-220ENST00000493674 ZNF646O15015 1829 aaPredicted RBP15.52■□□□□ 0.08
VPS52-220ENST00000493674 PDE8BO95263 885 aa15.52■□□□□ 0.08
VPS52-220ENST00000493674 FGFR2P21802 821 aa15.52■□□□□ 0.08
VPS52-220ENST00000493674 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.08
VPS52-220ENST00000493674 ECHDC1Q9NTX5 307 aa15.52■□□□□ 0.08
VPS52-220ENST00000493674 AKAP2Q9Y2D5 859 aa15.52■□□□□ 0.08
VPS52-220ENST00000493674 CHD4Q14839 1912 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 DUOX1Q9NRD9 1551 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 A0A1B0GUL7 405 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 NPHP1O15259 732 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 METTL24Q5JXM2 366 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 TSHZ3Q63HK5 1081 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 DDX46Q7L014 1031 aaKnown RBP15.51■□□□□ 0.07
VPS52-220ENST00000493674 MPHOSPH8Q99549 860 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 DBNDD2Q9BQY9 259 aa15.51■□□□□ 0.07
VPS52-220ENST00000493674 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
VPS52-220ENST00000493674 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
VPS52-220ENST00000493674 PSME4Q14997 1843 aa15.5■□□□□ 0.07
VPS52-220ENST00000493674 MAST2Q6P0Q8 1798 aa15.5■□□□□ 0.07
VPS52-220ENST00000493674 GLRX3O76003 335 aaKnown RBP15.5■□□□□ 0.07
VPS52-220ENST00000493674 RPS8P62241 208 aaKnown RBP15.5■□□□□ 0.07
VPS52-220ENST00000493674 GRAPQ13588 217 aa15.5■□□□□ 0.07
VPS52-220ENST00000493674 GRAPLQ8TC17 118 aaPredicted RBP15.5■□□□□ 0.07
VPS52-220ENST00000493674 GPATCH3Q96I76 525 aa15.5■□□□□ 0.07
VPS52-220ENST00000493674 CRAMP1Q96RY5 1269 aa15.5■□□□□ 0.07
VPS52-220ENST00000493674 ARFGEF1Q9Y6D6 1849 aa15.5■□□□□ 0.07
VPS52-220ENST00000493674 ERC2O15083 957 aa15.49■□□□□ 0.07
VPS52-220ENST00000493674 ATP5JP18859 108 aa15.49■□□□□ 0.07
VPS52-220ENST00000493674 SDSP20132 328 aa15.49■□□□□ 0.07
VPS52-220ENST00000493674 CHRNDQ07001 517 aa15.49■□□□□ 0.07
VPS52-220ENST00000493674 ATP2B3Q16720 1220 aa15.49■□□□□ 0.07
VPS52-220ENST00000493674 SRGNP10124 158 aa15.48■□□□□ 0.07
VPS52-220ENST00000493674 PDE6BP35913 854 aa15.48■□□□□ 0.07
VPS52-220ENST00000493674 TIMM10P62072 90 aa15.48■□□□□ 0.07
VPS52-220ENST00000493674 PUM3Q15397 648 aaKnown RBP15.48■□□□□ 0.07
VPS52-220ENST00000493674 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS52-220ENST00000493674 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
VPS52-220ENST00000493674 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
VPS52-220ENST00000493674 MINPP1Q9UNW1 487 aa15.48■□□□□ 0.07
VPS52-220ENST00000493674 FER1L6Q2WGJ9 1857 aa15.47■□□□□ 0.07
VPS52-220ENST00000493674 LPIN2Q92539 896 aa15.47■□□□□ 0.07
VPS52-220ENST00000493674 XAGE2Q96GT9 111 aa15.47■□□□□ 0.07
VPS52-220ENST00000493674 RBM17Q96I25 401 aaKnown RBP15.47■□□□□ 0.07
VPS52-220ENST00000493674 ZNF512BQ96KM6 892 aaPredicted RBP15.47■□□□□ 0.07
VPS52-220ENST00000493674 BCL11AQ9H165 835 aa15.47■□□□□ 0.07
VPS52-220ENST00000493674 IRS2Q9Y4H2 1338 aa15.46■□□□□ 0.07
VPS52-220ENST00000493674 CDC45O75419 566 aa15.46■□□□□ 0.07
VPS52-220ENST00000493674 NPR1P16066 1061 aa15.46■□□□□ 0.07
VPS52-220ENST00000493674 ADORA1P30542 326 aa15.46■□□□□ 0.07
VPS52-220ENST00000493674 RFX7Q2KHR2 1363 aa15.46■□□□□ 0.07
VPS52-220ENST00000493674 ZBTB22O15209 634 aa15.45■□□□□ 0.06
VPS52-220ENST00000493674 TAF5LO75529 589 aa15.45■□□□□ 0.06
VPS52-220ENST00000493674 UBE4AQ14139 1066 aa15.45■□□□□ 0.06
VPS52-220ENST00000493674 TMC4Q7Z404 712 aa15.45■□□□□ 0.06
VPS52-220ENST00000493674 HELBQ8NG08 1087 aaPredicted RBP15.45■□□□□ 0.06
VPS52-220ENST00000493674 NEUROD6Q96NK8 337 aa15.45■□□□□ 0.06
VPS52-220ENST00000493674 HAUS7Q99871 368 aa15.45■□□□□ 0.06
VPS52-220ENST00000493674 ANKRD2Q9GZV1 360 aa15.45■□□□□ 0.06
VPS52-220ENST00000493674 SNED1Q8TER0 1413 aa15.44■□□□□ 0.06
VPS52-220ENST00000493674 BBOX1O75936 387 aa15.44■□□□□ 0.06
VPS52-220ENST00000493674 SLC5A1P13866 664 aa15.44■□□□□ 0.06
VPS52-220ENST00000493674 STYK1Q6J9G0 422 aa15.44■□□□□ 0.06
VPS52-220ENST00000493674 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
VPS52-220ENST00000493674 MASTLQ96GX5 879 aa15.44■□□□□ 0.06
VPS52-220ENST00000493674 ZNF804BA4D1E1 1349 aa15.43■□□□□ 0.06
VPS52-220ENST00000493674 ARID4AP29374 1257 aaPredicted RBP15.43■□□□□ 0.06
VPS52-220ENST00000493674 CDK5RAP2Q96SN8 1893 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms