RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 TLL2Q9Y6L7 1015 aa21.36■■□□□ 1.01
PTPRU-208ENST00000493601 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
PTPRU-208ENST00000493601 UFL1O94874 794 aa21.35■■□□□ 1.01
PTPRU-208ENST00000493601 NEXNQ0ZGT2 675 aa21.35■■□□□ 1.01
PTPRU-208ENST00000493601 TWISTNBQ3B726 338 aaPredicted RBP21.35■■□□□ 1.01
PTPRU-208ENST00000493601 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
PTPRU-208ENST00000493601 PI4KAP1Q8N8J0 262 aa21.35■■□□□ 1.01
PTPRU-208ENST00000493601 CAPNS2Q96L46 248 aa21.35■■□□□ 1.01
PTPRU-208ENST00000493601 GLIS2Q9BZE0 524 aaPredicted RBP21.35■■□□□ 1.01
PTPRU-208ENST00000493601 ZBTB12Q9Y330 459 aaPredicted RBP21.35■■□□□ 1.01
PTPRU-208ENST00000493601 SPEF2Q9C093 1822 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 SCN9AQ15858 1988 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 CAPN15O75808 1086 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 CELF2O95319 508 aaKnown RBP21.34■■□□□ 1.01
PTPRU-208ENST00000493601 HIRAP54198 1017 aaPredicted RBP21.34■■□□□ 1.01
PTPRU-208ENST00000493601 DOK7Q18PE1 504 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 ANKRD18AQ8IVF6 992 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 ZC3H12CQ9C0D7 883 aaKnown RBP21.34■■□□□ 1.01
PTPRU-208ENST00000493601 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 GGA1Q9UJY5 639 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 RTL9Q8NET4 1388 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 PSME4Q14997 1843 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
PTPRU-208ENST00000493601 SHTN1A0MZ66 631 aa21.33■■□□□ 1.01
PTPRU-208ENST00000493601 CTSWP56202 376 aa21.33■■□□□ 1.01
PTPRU-208ENST00000493601 CDC37L1Q7L3B6 337 aa21.33■■□□□ 1.01
PTPRU-208ENST00000493601 JARID2Q92833 1246 aaPredicted RBP21.33■■□□□ 1.01
PTPRU-208ENST00000493601 GPR101Q96P66 508 aaPredicted RBP21.33■■□□□ 1.01
PTPRU-208ENST00000493601 G3V3G9 751 aa21.32■■□□□ 1
PTPRU-208ENST00000493601 IGKV5-2P06315 115 aa21.32■■□□□ 1
PTPRU-208ENST00000493601 DCAF8Q5TAQ9 597 aa21.32■■□□□ 1
PTPRU-208ENST00000493601 CCDC85AQ96PX6 553 aaPredicted RBP21.32■■□□□ 1
PTPRU-208ENST00000493601 CDC5LQ99459 802 aaKnown RBP21.32■■□□□ 1
PTPRU-208ENST00000493601 XDHP47989 1333 aa21.31■■□□□ 1
PTPRU-208ENST00000493601 ANP32CO43423 234 aa21.31■■□□□ 1
PTPRU-208ENST00000493601 GRM1Q13255 1194 aa21.31■■□□□ 1
PTPRU-208ENST00000493601 CYP4F22Q6NT55 531 aa21.31■■□□□ 1
PTPRU-208ENST00000493601 SAPCD2Q86UD0 394 aa21.31■■□□□ 1
PTPRU-208ENST00000493601 SAMD7Q7Z3H4 446 aa21.3■■□□□ 1
PTPRU-208ENST00000493601 HHIPL1Q96JK4 782 aa21.3■■□□□ 1
PTPRU-208ENST00000493601 ZNF408Q9H9D4 720 aa21.3■■□□□ 1
PTPRU-208ENST00000493601 KCNQ5Q9NR82 932 aa21.3■■□□□ 1
PTPRU-208ENST00000493601 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
PTPRU-208ENST00000493601 ZNF609O15014 1411 aa21.29■■□□□ 1
PTPRU-208ENST00000493601 NEURL1BA8MQ27 555 aa21.29■■□□□ 1
PTPRU-208ENST00000493601 SLC4A2P04920 1241 aa21.29■■□□□ 1
PTPRU-208ENST00000493601 LBX1P52954 281 aa21.29■■□□□ 1
PTPRU-208ENST00000493601 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
PTPRU-208ENST00000493601 TBC1D10BQ4KMP7 808 aaPredicted RBP21.29■■□□□ 1
PTPRU-208ENST00000493601 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
PTPRU-208ENST00000493601 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
PTPRU-208ENST00000493601 TTLL11Q8NHH1 800 aa21.28■■□□□ 1
PTPRU-208ENST00000493601 HSPA8P11142 646 aaKnown RBP21.27■■□□□ 1
PTPRU-208ENST00000493601 ATP2B4P23634 1241 aa21.27■■□□□ 1
PTPRU-208ENST00000493601 MAP2K2P36507 400 aa21.27■■□□□ 1
PTPRU-208ENST00000493601 FLIIQ13045 1269 aa21.27■■□□□ 1
PTPRU-208ENST00000493601 G2E3Q7L622 706 aa21.27■■□□□ 1
PTPRU-208ENST00000493601 KRT26Q7Z3Y9 468 aa21.27■■□□□ 1
PTPRU-208ENST00000493601 USP48Q86UV5 1035 aa21.27■■□□□ 1
PTPRU-208ENST00000493601 EGFRP00533 1210 aa21.26■□□□□ 0.99
PTPRU-208ENST00000493601 KIF4BQ2VIQ3 1234 aa21.26■□□□□ 0.99
PTPRU-208ENST00000493601 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
PTPRU-208ENST00000493601 WDR63Q8IWG1 891 aa21.26■□□□□ 0.99
PTPRU-208ENST00000493601 DCPSQ96C86 337 aaKnown RBP21.26■□□□□ 0.99
PTPRU-208ENST00000493601 GREM2Q9H772 168 aa21.26■□□□□ 0.99
PTPRU-208ENST00000493601 BSDC1Q9NW68 430 aaPredicted RBP21.26■□□□□ 0.99
PTPRU-208ENST00000493601 POLR2AP24928 1970 aaKnown RBP21.26■□□□□ 0.99
PTPRU-208ENST00000493601 MED23Q9ULK4 1368 aa21.25■□□□□ 0.99
PTPRU-208ENST00000493601 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
PTPRU-208ENST00000493601 FKBP5Q13451 457 aaPredicted RBP21.25■□□□□ 0.99
PTPRU-208ENST00000493601 MYH16Q9H6N6 1097 aa21.25■□□□□ 0.99
PTPRU-208ENST00000493601 H7C1W4 665 aa21.24■□□□□ 0.99
PTPRU-208ENST00000493601 GCKRQ14397 625 aa21.24■□□□□ 0.99
PTPRU-208ENST00000493601 RBM26Q5T8P6 1007 aaKnown RBP21.24■□□□□ 0.99
PTPRU-208ENST00000493601 RSBN1LQ6PCB5 846 aaPredicted RBP21.24■□□□□ 0.99
PTPRU-208ENST00000493601 AGBL3Q8NEM8 1001 aa21.24■□□□□ 0.99
PTPRU-208ENST00000493601 AOC2O75106 756 aa21.23■□□□□ 0.99
PTPRU-208ENST00000493601 DNAAF4Q8WXU2 420 aa21.23■□□□□ 0.99
PTPRU-208ENST00000493601 MINPP1Q9UNW1 487 aa21.23■□□□□ 0.99
PTPRU-208ENST00000493601 IGHMBP2P38935 993 aaKnown RBP21.22■□□□□ 0.99
PTPRU-208ENST00000493601 ZNF280AP59817 542 aaPredicted RBP21.22■□□□□ 0.99
PTPRU-208ENST00000493601 PODNQ7Z5L7 613 aa21.22■□□□□ 0.99
PTPRU-208ENST00000493601 LINS1Q8NG48 757 aa21.22■□□□□ 0.99
PTPRU-208ENST00000493601 PLA2G12BQ9BX93 195 aa21.22■□□□□ 0.99
PTPRU-208ENST00000493601 GGA3Q9NZ52 723 aa21.22■□□□□ 0.99
PTPRU-208ENST00000493601 ZNF646O15015 1829 aaPredicted RBP21.22■□□□□ 0.99
PTPRU-208ENST00000493601 USP17L3A6NCW0 530 aa21.21■□□□□ 0.99
PTPRU-208ENST00000493601 USP17L4A6NCW7 530 aa21.21■□□□□ 0.99
PTPRU-208ENST00000493601 ADM5C9JUS6 153 aa21.21■□□□□ 0.99
PTPRU-208ENST00000493601 CA12O43570 354 aa21.21■□□□□ 0.99
PTPRU-208ENST00000493601 BRPF1P55201 1214 aaPredicted RBP21.21■□□□□ 0.99
PTPRU-208ENST00000493601 HUNKP57058 714 aa21.21■□□□□ 0.99
PTPRU-208ENST00000493601 USP17L1Q7RTZ2 530 aa21.21■□□□□ 0.99
PTPRU-208ENST00000493601 SULF1Q8IWU6 871 aa21.21■□□□□ 0.99
PTPRU-208ENST00000493601 SALL2Q9Y467 1007 aaPredicted RBP21.21■□□□□ 0.99
PTPRU-208ENST00000493601 VAMP4O75379 141 aa21.2■□□□□ 0.98
PTPRU-208ENST00000493601 CCT4P50991 539 aaKnown RBP21.2■□□□□ 0.98
PTPRU-208ENST00000493601 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
PTPRU-208ENST00000493601 USP17L8P0C7I0 530 aa21.19■□□□□ 0.98
PTPRU-208ENST00000493601 ITGA6P23229 1130 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms