RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 KIF2CQ99661 725 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 ZSCAN16Q9H4T2 348 aaPredicted RBP7.98□□□□□ -1.13
VPS13B-205ENST00000493587 ARFGAP3Q9NP61 516 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 MKRN1Q9UHC7 482 aaKnown RBP7.98□□□□□ -1.13
VPS13B-205ENST00000493587 TNNQ9UQP3 1299 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 PHACTR2O75167 634 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 EIF5P55010 431 aaKnown RBP7.98□□□□□ -1.13
VPS13B-205ENST00000493587 ADCY2Q08462 1091 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 ZSCAN25Q6NSZ9 544 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 RMI1Q9H9A7 625 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 CLIP2Q9UDT6 1046 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 ANAPC4Q9UJX5 808 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 MRFAP1Q9Y605 127 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 IL16Q14005 1332 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 CASZ1Q86V15 1759 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 CICQ96RK0 1608 aaPredicted RBP7.97□□□□□ -1.13
VPS13B-205ENST00000493587 SKAP2O75563 359 aaPredicted RBP7.97□□□□□ -1.13
VPS13B-205ENST00000493587 MYBL2P10244 700 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 ABCD1P33897 745 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 CCDC102AQ96A19 550 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 NHSL1Q5SYE7 1610 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 FIBPO43427 364 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 CCDC192P0DO97 292 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 H2AFXP16104 143 aaPredicted RBP7.97□□□□□ -1.13
VPS13B-205ENST00000493587 GCFC2P16383 781 aaKnown RBP7.97□□□□□ -1.13
VPS13B-205ENST00000493587 HDAC1Q13547 482 aaPredicted RBP7.97□□□□□ -1.13
VPS13B-205ENST00000493587 SAFB2Q14151 953 aaKnown RBP eCLIP7.97□□□□□ -1.13
VPS13B-205ENST00000493587 CCDC30Q5VVM6 783 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 ZBTB10Q96DT7 871 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 FAXDC2Q96IV6 333 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 CDK19Q9BWU1 502 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 MINK1Q8N4C8 1332 aaPredicted RBP7.97□□□□□ -1.13
VPS13B-205ENST00000493587 RLBP1P12271 317 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 CCDC96Q2M329 555 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 USP48Q86UV5 1035 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 TMTC2Q8N394 836 aa7.97□□□□□ -1.13
VPS13B-205ENST00000493587 CRB1P82279 1406 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 PLCH1Q4KWH8 1693 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 PLEKHG3A1L390 1219 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 PES1O00541 588 aaKnown RBP7.96□□□□□ -1.13
VPS13B-205ENST00000493587 SKILP12757 684 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 CCNHP51946 323 aaPredicted RBP7.96□□□□□ -1.13
VPS13B-205ENST00000493587 SNW1Q13573 536 aaKnown RBP7.96□□□□□ -1.13
VPS13B-205ENST00000493587 PLEKHO1Q53GL0 409 aaPredicted RBP7.96□□□□□ -1.13
VPS13B-205ENST00000493587 RINLQ6ZS11 566 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 CCDC26Q8TAB7 109 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 ZNF428Q96B54 188 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 KIF9Q9HAQ2 790 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 PICK1Q9NRD5 415 aa7.96□□□□□ -1.13
VPS13B-205ENST00000493587 DDX60Q8IY21 1712 aaKnown RBP7.96□□□□□ -1.14
VPS13B-205ENST00000493587 NRDCO43847 1150 aa7.96□□□□□ -1.14
VPS13B-205ENST00000493587 URI1O94763 535 aaPredicted RBP7.96□□□□□ -1.14
VPS13B-205ENST00000493587 MX1P20591 662 aa7.96□□□□□ -1.14
VPS13B-205ENST00000493587 SCRN1Q12765 414 aa7.96□□□□□ -1.14
VPS13B-205ENST00000493587 CRACR2AQ9BSW2 395 aa7.96□□□□□ -1.14
VPS13B-205ENST00000493587 USP27XA6NNY8 438 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 GBP2P32456 591 aaPredicted RBP7.95□□□□□ -1.14
VPS13B-205ENST00000493587 IL13P35225 146 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 SNX1Q13596 522 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 TBC1D9Q6ZT07 1266 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.95□□□□□ -1.14
VPS13B-205ENST00000493587 NCKAP5LQ9HCH0 1330 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 ENO4A6NNW6 628 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 CYP2E1P05181 493 aaPredicted RBP7.95□□□□□ -1.14
VPS13B-205ENST00000493587 REXO1L1PQ8IX06 675 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 KIRREL3Q8IZU9 778 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 ZRSR2Q15696 482 aaKnown RBP7.95□□□□□ -1.14
VPS13B-205ENST00000493587 LUZP1Q86V48 1076 aa7.95□□□□□ -1.14
VPS13B-205ENST00000493587 CACTINQ8WUQ7 758 aaKnown RBP7.95□□□□□ -1.14
VPS13B-205ENST00000493587 WASLO00401 505 aaPredicted RBP7.94□□□□□ -1.14
VPS13B-205ENST00000493587 EIF3JO75822 258 aaKnown RBP7.94□□□□□ -1.14
VPS13B-205ENST00000493587 SNUPNO95149 360 aaKnown RBP7.94□□□□□ -1.14
VPS13B-205ENST00000493587 KCNA4P22459 653 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 INPP5BP32019 993 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 RANBP1P43487 201 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 MCM2P49736 904 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 CC2D2BQ6DHV5 1058 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 PARD3BQ8TEW8 1205 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 NUP133Q8WUM0 1156 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 RUNDC1Q96C34 613 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 CHCHD3Q9NX63 227 aaKnown RBP7.94□□□□□ -1.14
VPS13B-205ENST00000493587 ZDHHC9Q9Y397 364 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.94□□□□□ -1.14
VPS13B-205ENST00000493587 TBC1D8BQ0IIM8 1120 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 DNAJC14Q6Y2X3 702 aaPredicted RBP7.94□□□□□ -1.14
VPS13B-205ENST00000493587 TXNDC2Q86VQ3 553 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 IQUBQ8NA54 791 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 CABS1Q96KC9 395 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 TACO1Q9BSH4 297 aaKnown RBP7.94□□□□□ -1.14
VPS13B-205ENST00000493587 STK31Q9BXU1 1019 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 CAPN7Q9Y6W3 813 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 TOGARAM1Q9Y4F4 1720 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 GOLGA6L19H0YKK7 550 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 AP5Z1O43299 807 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 KIAA0754O94854 1291 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 MTHFSP49914 203 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 ANKRD23Q86SG2 305 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 KIAA1328Q86T90 577 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 IQCA1Q86XH1 822 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms