RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 KRT25Q7Z3Z0 450 aa7.97□□□□□ -1.13
SYCP1-208ENST00000493377 CFPP27918 469 aa7.96□□□□□ -1.14
SYCP1-208ENST00000493377 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.14
SYCP1-208ENST00000493377 VSIG10Q8N0Z9 540 aa7.96□□□□□ -1.14
SYCP1-208ENST00000493377 IFT43Q96FT9 208 aa7.96□□□□□ -1.14
SYCP1-208ENST00000493377 NOD1Q9Y239 953 aa7.96□□□□□ -1.14
SYCP1-208ENST00000493377 TARSP26639 723 aaKnown RBP7.95□□□□□ -1.14
SYCP1-208ENST00000493377 EML3Q32P44 896 aa7.95□□□□□ -1.14
SYCP1-208ENST00000493377 C1QL4Q86Z23 238 aa7.95□□□□□ -1.14
SYCP1-208ENST00000493377 ALDH16A1Q8IZ83 802 aa7.95□□□□□ -1.14
SYCP1-208ENST00000493377 FAM168AQ92567 244 aa7.95□□□□□ -1.14
SYCP1-208ENST00000493377 RBSNQ9H1K0 784 aa7.95□□□□□ -1.14
SYCP1-208ENST00000493377 TSPAN10Q9H1Z9 355 aaPredicted RBP7.95□□□□□ -1.14
SYCP1-208ENST00000493377 TGFBR3LH3BV60 316 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 GHRHP01286 108 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 MESP2Q0VG99 397 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 RTN1Q16799 776 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 DUOXA2Q1HG44 320 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 ATG4DQ86TL0 474 aaPredicted RBP7.94□□□□□ -1.14
SYCP1-208ENST00000493377 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 KCNK4Q9NYG8 393 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 LMCD1Q9NZU5 365 aa7.94□□□□□ -1.14
SYCP1-208ENST00000493377 CYP26A1O43174 497 aa7.93□□□□□ -1.14
SYCP1-208ENST00000493377 PREPP48147 710 aa7.93□□□□□ -1.14
SYCP1-208ENST00000493377 LOC102724428A0A0B4J2F2 783 aa7.92□□□□□ -1.14
SYCP1-208ENST00000493377 RAP1GAPP47736 663 aa7.92□□□□□ -1.14
SYCP1-208ENST00000493377 SIK1P57059 783 aa7.92□□□□□ -1.14
SYCP1-208ENST00000493377 TLR7Q9NYK1 1049 aaKnown RBP7.92□□□□□ -1.14
SYCP1-208ENST00000493377 DMGDHQ9UI17 866 aaKnown RBP7.92□□□□□ -1.14
SYCP1-208ENST00000493377 ZNF792Q3KQV3 632 aa7.91□□□□□ -1.14
SYCP1-208ENST00000493377 LRRC56Q8IYG6 542 aaPredicted RBP7.91□□□□□ -1.14
SYCP1-208ENST00000493377 COL26A1Q96A83 441 aa7.91□□□□□ -1.14
SYCP1-208ENST00000493377 GPBP1L1Q9HC44 474 aaPredicted RBP7.91□□□□□ -1.14
SYCP1-208ENST00000493377 LINC01387J3KSC0 135 aa7.9□□□□□ -1.14
SYCP1-208ENST00000493377 TM4SF5O14894 197 aa7.9□□□□□ -1.14
SYCP1-208ENST00000493377 ZSCAN22P10073 491 aaPredicted RBP7.9□□□□□ -1.14
SYCP1-208ENST00000493377 MAP4P27816 1152 aaKnown RBP7.9□□□□□ -1.14
SYCP1-208ENST00000493377 KLHL23Q8NBE8 558 aa7.9□□□□□ -1.14
SYCP1-208ENST00000493377 TRIM33Q9UPN9 1127 aa7.9□□□□□ -1.14
SYCP1-208ENST00000493377 J3QW42 95 aa7.89□□□□□ -1.15
SYCP1-208ENST00000493377 LZTS3O60299 673 aaPredicted RBP7.89□□□□□ -1.15
SYCP1-208ENST00000493377 SASH3O75995 380 aa7.89□□□□□ -1.15
SYCP1-208ENST00000493377 INPP5BP32019 993 aa7.89□□□□□ -1.15
SYCP1-208ENST00000493377 PLCL1Q15111 1095 aa7.89□□□□□ -1.15
SYCP1-208ENST00000493377 TSPAN15O95858 294 aa7.88□□□□□ -1.15
SYCP1-208ENST00000493377 STAG2Q8N3U4 1231 aa7.88□□□□□ -1.15
SYCP1-208ENST00000493377 GAS2O43903 313 aaKnown RBP7.87□□□□□ -1.15
SYCP1-208ENST00000493377 HOXD8P13378 290 aaPredicted RBP7.87□□□□□ -1.15
SYCP1-208ENST00000493377 PPP1R12BO60237 982 aaPredicted RBP7.86□□□□□ -1.15
SYCP1-208ENST00000493377 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
SYCP1-208ENST00000493377 RNF208Q9H0X6 261 aa7.86□□□□□ -1.15
SYCP1-208ENST00000493377 PSAPP07602 524 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 FDX2Q6P4F2 183 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 DBX2Q6ZNG2 339 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 GLIS3Q8NEA6 775 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 UBASH3BQ8TF42 649 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 PPP1R16BQ96T49 567 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 ADAM19Q9H013 955 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 BCS1LQ9Y276 419 aa7.85□□□□□ -1.15
SYCP1-208ENST00000493377 SOX18P35713 384 aa7.84□□□□□ -1.15
SYCP1-208ENST00000493377 IDH3AP50213 366 aa7.84□□□□□ -1.15
SYCP1-208ENST00000493377 ARSDP51689 593 aa7.84□□□□□ -1.15
SYCP1-208ENST00000493377 CTSWP56202 376 aa7.84□□□□□ -1.15
SYCP1-208ENST00000493377 SLC5A6Q9Y289 635 aa7.84□□□□□ -1.15
SYCP1-208ENST00000493377 FSCN2O14926 492 aa7.83□□□□□ -1.16
SYCP1-208ENST00000493377 IRF5Q13568 498 aa7.83□□□□□ -1.16
SYCP1-208ENST00000493377 ECM1Q16610 540 aa7.83□□□□□ -1.16
SYCP1-208ENST00000493377 CRTC2Q53ET0 693 aaPredicted RBP7.83□□□□□ -1.16
SYCP1-208ENST00000493377 SGO2Q562F6 1265 aa7.83□□□□□ -1.16
SYCP1-208ENST00000493377 TXNDC11Q6PKC3 985 aa7.83□□□□□ -1.16
SYCP1-208ENST00000493377 NSUN5Q96P11 429 aaKnown RBP7.83□□□□□ -1.16
SYCP1-208ENST00000493377 CARD10Q9BWT7 1032 aa7.83□□□□□ -1.16
SYCP1-208ENST00000493377 M0R2N6 131 aa7.82□□□□□ -1.16
SYCP1-208ENST00000493377 ADAM11O75078 769 aa7.82□□□□□ -1.16
SYCP1-208ENST00000493377 RXRBP28702 533 aa7.82□□□□□ -1.16
SYCP1-208ENST00000493377 FAM117BQ6P1L5 589 aa7.82□□□□□ -1.16
SYCP1-208ENST00000493377 NGLY1Q96IV0 654 aa7.82□□□□□ -1.16
SYCP1-208ENST00000493377 C2orf49Q9BVC5 232 aaPredicted RBP7.82□□□□□ -1.16
SYCP1-208ENST00000493377 PRM3Q9NNZ6 103 aa7.82□□□□□ -1.16
SYCP1-208ENST00000493377 TBC1D2BQ9UPU7 963 aa7.82□□□□□ -1.16
SYCP1-208ENST00000493377 LRRC10BA6NIK2 292 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 EGFRP00533 1210 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 KRTAP1-1Q07627 177 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 VAC14Q08AM6 782 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 PAOXQ6QHF9 649 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 BCL7CQ8WUZ0 217 aaPredicted RBP7.81□□□□□ -1.16
SYCP1-208ENST00000493377 SNRKQ9NRH2 765 aa7.81□□□□□ -1.16
SYCP1-208ENST00000493377 PSPNO60542 156 aa7.8□□□□□ -1.16
SYCP1-208ENST00000493377 SKIP12755 728 aa7.8□□□□□ -1.16
SYCP1-208ENST00000493377 SOX11P35716 441 aa7.8□□□□□ -1.16
SYCP1-208ENST00000493377 SEMA3FQ13275 785 aa7.8□□□□□ -1.16
SYCP1-208ENST00000493377 RC3H2Q9HBD1 1191 aaKnown RBP7.8□□□□□ -1.16
SYCP1-208ENST00000493377 FAM53CQ9NYF3 392 aa7.8□□□□□ -1.16
SYCP1-208ENST00000493377 ZC3H7BQ9UGR2 993 aaKnown RBP7.8□□□□□ -1.16
SYCP1-208ENST00000493377 FAM95CA0A1B0GW59 222 aa7.79□□□□□ -1.16
SYCP1-208ENST00000493377 DDX3YO15523 660 aaKnown RBP7.79□□□□□ -1.16
SYCP1-208ENST00000493377 C21orf2O43822 256 aa7.79□□□□□ -1.16
SYCP1-208ENST00000493377 INHBBP09529 407 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms