RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 TTC41PQ6P2S7 1318 aa18.63■□□□□ 0.57
BRAT1-206ENST00000493232 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
BRAT1-206ENST00000493232 FAM107BQ9H098 131 aa18.63■□□□□ 0.57
BRAT1-206ENST00000493232 RTL9Q8NET4 1388 aa18.63■□□□□ 0.57
BRAT1-206ENST00000493232 FSD2A1L4K1 749 aa18.63■□□□□ 0.57
BRAT1-206ENST00000493232 TOM1O60784 492 aa18.63■□□□□ 0.57
BRAT1-206ENST00000493232 MRPS27Q92552 414 aaKnown RBP18.63■□□□□ 0.57
BRAT1-206ENST00000493232 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
BRAT1-206ENST00000493232 PLCG2P16885 1265 aa18.63■□□□□ 0.57
BRAT1-206ENST00000493232 PUF60Q9UHX1 559 aaKnown RBP18.63■□□□□ 0.57
BRAT1-206ENST00000493232 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
BRAT1-206ENST00000493232 FLT4P35916 1363 aa18.62■□□□□ 0.57
BRAT1-206ENST00000493232 KRT13P13646 458 aa18.62■□□□□ 0.57
BRAT1-206ENST00000493232 CYLC1P35663 651 aaPredicted RBP18.62■□□□□ 0.57
BRAT1-206ENST00000493232 SPAG5Q96R06 1193 aa18.62■□□□□ 0.57
BRAT1-206ENST00000493232 BCCIPQ9P287 314 aaKnown RBP eCLIP18.62■□□□□ 0.57
BRAT1-206ENST00000493232 CCDC175P0C221 793 aa18.62■□□□□ 0.57
BRAT1-206ENST00000493232 SLC9C2Q5TAH2 1124 aa18.62■□□□□ 0.57
BRAT1-206ENST00000493232 BBXQ8WY36 941 aaPredicted RBP18.62■□□□□ 0.57
BRAT1-206ENST00000493232 NIP7Q9Y221 180 aaKnown RBP eCLIP18.62■□□□□ 0.57
BRAT1-206ENST00000493232 NF2P35240 595 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 RIMS2Q9UQ26 1411 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 CCDC171Q6TFL3 1326 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 CALML3P27482 149 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 CKAP4Q07065 602 aaKnown RBP18.61■□□□□ 0.57
BRAT1-206ENST00000493232 HEATR3Q7Z4Q2 680 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 PLCH2O75038 1416 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 DDB1Q16531 1140 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 SLC4A8Q2Y0W8 1093 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 B4DLN1 442 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 PSMA7O14818 248 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
BRAT1-206ENST00000493232 NECAB1Q8N987 351 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 JADE2Q9NQC1 790 aa18.61■□□□□ 0.57
BRAT1-206ENST00000493232 TRMT1LQ7Z2T5 733 aaKnown RBP18.6■□□□□ 0.57
BRAT1-206ENST00000493232 C6orf50Q9HD87 102 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 PAG1Q9NWQ8 432 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 A2MP01023 1474 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 MAGEB6P1A0A0J9YX57 407 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 IL2RBP14784 551 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 NAPAP54920 295 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 UBASH3AP57075 661 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 EIF4A2Q14240 407 aaKnown RBP18.6■□□□□ 0.57
BRAT1-206ENST00000493232 PAXBP1Q9Y5B6 917 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 LRSAM1Q6UWE0 723 aa18.6■□□□□ 0.57
BRAT1-206ENST00000493232 SOS1Q07889 1333 aaPredicted RBP18.6■□□□□ 0.57
BRAT1-206ENST00000493232 GNG11P61952 73 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 GIGYF2Q6Y7W6 1299 aaKnown RBP18.59■□□□□ 0.57
BRAT1-206ENST00000493232 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
BRAT1-206ENST00000493232 POLR3AO14802 1390 aaPredicted RBP18.59■□□□□ 0.57
BRAT1-206ENST00000493232 SLC39A6Q13433 755 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 Q6ZUG5 572 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 PRPHP41219 470 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 KIAA0753Q2KHM9 967 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 CTR9Q6PD62 1173 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 COMMD10Q9Y6G5 202 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 ISM2Q6H9L7 571 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 TPTE2Q6XPS3 522 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 ZSCAN23Q3MJ62 389 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 TSNARE1Q96NA8 513 aa18.59■□□□□ 0.57
BRAT1-206ENST00000493232 UBE4AQ14139 1066 aa18.58■□□□□ 0.57
BRAT1-206ENST00000493232 TMX1Q9H3N1 280 aa18.58■□□□□ 0.57
BRAT1-206ENST00000493232 HOMER2Q9NSB8 354 aa18.58■□□□□ 0.57
BRAT1-206ENST00000493232 TRIM75PA6NK02 468 aa18.58■□□□□ 0.57
BRAT1-206ENST00000493232 DZIP3Q86Y13 1208 aaKnown RBP18.58■□□□□ 0.57
BRAT1-206ENST00000493232 TTC12Q9H892 705 aaPredicted RBP18.58■□□□□ 0.57
BRAT1-206ENST00000493232 RNF113AO15541 343 aaKnown RBP18.58■□□□□ 0.56
BRAT1-206ENST00000493232 LRRC45Q96CN5 670 aa18.58■□□□□ 0.56
BRAT1-206ENST00000493232 AFMP43652 599 aa18.58■□□□□ 0.56
BRAT1-206ENST00000493232 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
BRAT1-206ENST00000493232 CEP135Q66GS9 1140 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 SPECC1LQ69YQ0 1117 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 MAATS1Q7Z4T9 603 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 ANKRD2Q9GZV1 360 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 CEP112Q8N8E3 955 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 PPFIA3O75145 1194 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 ASIC1P78348 528 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 FAM200AQ8TCP9 573 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 SYNCQ9H7C4 482 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 IKBKGQ9Y6K9 419 aa18.57■□□□□ 0.56
BRAT1-206ENST00000493232 ZFYVE9O95405 1425 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 RAD50Q92878 1312 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 PABPN1LA6NDY0 278 aaKnown RBP18.56■□□□□ 0.56
BRAT1-206ENST00000493232 HCLS1P14317 486 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-206ENST00000493232 NMIQ13287 307 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-206ENST00000493232 LRRC2Q9BYS8 371 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 RRP36Q96EU6 259 aaKnown RBP18.56■□□□□ 0.56
BRAT1-206ENST00000493232 IQSEC3Q9UPP2 1182 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-206ENST00000493232 PHACTR2O75167 634 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 SIRT1Q96EB6 747 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 ZNF518AQ6AHZ1 1483 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
BRAT1-206ENST00000493232 F13A1P00488 732 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 SNX21Q969T3 373 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms