RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 LRRC37AA6NMS7 1700 aa15.93■□□□□ 0.14
COL6A1-205ENST00000492851 XDHP47989 1333 aa15.93■□□□□ 0.14
COL6A1-205ENST00000492851 LTBP1Q14766 1721 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 PSMD14O00487 310 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 UFL1O94874 794 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 CTCFP49711 727 aaPredicted RBP15.92■□□□□ 0.14
COL6A1-205ENST00000492851 CTSWP56202 376 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 DOK7Q18PE1 504 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 CST9Q5W186 159 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 HHIPL1Q96JK4 782 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 PRDM10Q9NQV6 1147 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 WBP1LQ9NX94 342 aa15.92■□□□□ 0.14
COL6A1-205ENST00000492851 RTL9Q8NET4 1388 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 H7C1W4 665 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 VIL1P09327 827 aaKnown RBP15.91■□□□□ 0.14
COL6A1-205ENST00000492851 FLIIQ13045 1269 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
COL6A1-205ENST00000492851 PODNQ7Z5L7 613 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 TTLL11Q8NHH1 800 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
COL6A1-205ENST00000492851 BEGAINQ9BUH8 593 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 BSDC1Q9NW68 430 aaPredicted RBP15.91■□□□□ 0.14
COL6A1-205ENST00000492851 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
COL6A1-205ENST00000492851 TLL2Q9Y6L7 1015 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 FANCIQ9NVI1 1328 aa15.91■□□□□ 0.14
COL6A1-205ENST00000492851 TRAF5O00463 557 aa15.9■□□□□ 0.14
COL6A1-205ENST00000492851 VAMP4O75379 141 aa15.9■□□□□ 0.14
COL6A1-205ENST00000492851 CELF2O95319 508 aaKnown RBP15.9■□□□□ 0.14
COL6A1-205ENST00000492851 MAP2K2P36507 400 aa15.9■□□□□ 0.14
COL6A1-205ENST00000492851 HIRAP54198 1017 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-205ENST00000492851 PAXIP1Q6ZW49 1069 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-205ENST00000492851 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
COL6A1-205ENST00000492851 DNAAF4Q8WXU2 420 aa15.9■□□□□ 0.14
COL6A1-205ENST00000492851 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-205ENST00000492851 PCNTO95613 3336 aa15.89■□□□□ 0.13
COL6A1-205ENST00000492851 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
COL6A1-205ENST00000492851 GCKRQ14397 625 aa15.89■□□□□ 0.13
COL6A1-205ENST00000492851 CWF19L2Q2TBE0 894 aaKnown RBP15.89■□□□□ 0.13
COL6A1-205ENST00000492851 G2E3Q7L622 706 aa15.89■□□□□ 0.13
COL6A1-205ENST00000492851 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
COL6A1-205ENST00000492851 DCPSQ96C86 337 aaKnown RBP15.89■□□□□ 0.13
COL6A1-205ENST00000492851 CAPNS2Q96L46 248 aa15.89■□□□□ 0.13
COL6A1-205ENST00000492851 GPR101Q96P66 508 aaPredicted RBP15.89■□□□□ 0.13
COL6A1-205ENST00000492851 PLA2G12BQ9BX93 195 aa15.89■□□□□ 0.13
COL6A1-205ENST00000492851 FOXN1O15353 648 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 SAMD7Q7Z3H4 446 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 UBE3BQ7Z3V4 1068 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 SAPCD2Q86UD0 394 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 TRPM4Q8TD43 1214 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 GLIS2Q9BZE0 524 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-205ENST00000492851 ANKRD2Q9GZV1 360 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 MINPP1Q9UNW1 487 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 LEMD3Q9Y2U8 911 aa15.88■□□□□ 0.13
COL6A1-205ENST00000492851 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-205ENST00000492851 MMP14P50281 582 aa15.87■□□□□ 0.13
COL6A1-205ENST00000492851 EXOSC9Q06265 439 aaKnown RBP15.87■□□□□ 0.13
COL6A1-205ENST00000492851 USP48Q86UV5 1035 aa15.87■□□□□ 0.13
COL6A1-205ENST00000492851 MPHOSPH8Q99549 860 aa15.87■□□□□ 0.13
COL6A1-205ENST00000492851 GREM2Q9H772 168 aa15.87■□□□□ 0.13
COL6A1-205ENST00000492851 TAF1P21675 1872 aa15.86■□□□□ 0.13
COL6A1-205ENST00000492851 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL6A1-205ENST00000492851 TBC1D10BQ4KMP7 808 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-205ENST00000492851 RSBN1LQ6PCB5 846 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-205ENST00000492851 KCNQ5Q9NR82 932 aa15.86■□□□□ 0.13
COL6A1-205ENST00000492851 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 CSF1RP07333 972 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 CCT4P50991 539 aaKnown RBP15.85■□□□□ 0.13
COL6A1-205ENST00000492851 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-205ENST00000492851 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 RBM26Q5T8P6 1007 aaKnown RBP15.85■□□□□ 0.13
COL6A1-205ENST00000492851 CYP4F22Q6NT55 531 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 KRT26Q7Z3Y9 468 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 SULF1Q8IWU6 871 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 FAM9BQ8IZU0 186 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 ZNF408Q9H9D4 720 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 MED23Q9ULK4 1368 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 ZNF609O15014 1411 aa15.85■□□□□ 0.13
COL6A1-205ENST00000492851 SHTN1A0MZ66 631 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 CA12O43570 354 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 USP17L8P0C7I0 530 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 ITGA6P23229 1130 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 GRM1Q13255 1194 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 C2orf69Q8N8R5 385 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 COA1Q9GZY4 146 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 MYO3BQ8WXR4 1341 aa15.84■□□□□ 0.13
COL6A1-205ENST00000492851 ANKRD18BA2A2Z9 1011 aa15.83■□□□□ 0.12
COL6A1-205ENST00000492851 LBX1P52954 281 aa15.83■□□□□ 0.12
COL6A1-205ENST00000492851 OGFOD1Q8N543 542 aa15.83■□□□□ 0.12
COL6A1-205ENST00000492851 CASP7P55210 303 aa15.82■□□□□ 0.12
COL6A1-205ENST00000492851 NOGQ13253 232 aa15.82■□□□□ 0.12
COL6A1-205ENST00000492851 IFIT5Q13325 482 aaKnown RBP15.82■□□□□ 0.12
COL6A1-205ENST00000492851 STRIP1Q5VSL9 837 aa15.82■□□□□ 0.12
COL6A1-205ENST00000492851 CCDC102AQ96A19 550 aa15.82■□□□□ 0.12
COL6A1-205ENST00000492851 ZNF804BA4D1E1 1349 aa15.82■□□□□ 0.12
COL6A1-205ENST00000492851 EGFRP00533 1210 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms