RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 DDR1Q08345 913 aa6.2□□□□□ -1.42
UBR4-215ENST00000492606 NLRP13Q86W25 1043 aa6.2□□□□□ -1.42
UBR4-215ENST00000492606 NUTM1Q86Y26 1132 aa6.2□□□□□ -1.42
UBR4-215ENST00000492606 PRAM1Q96QH2 718 aa6.2□□□□□ -1.42
UBR4-215ENST00000492606 C1QTNF1Q9BXJ1 281 aa6.2□□□□□ -1.42
UBR4-215ENST00000492606 SEPT9Q9UHD8 586 aaPredicted RBP6.2□□□□□ -1.42
UBR4-215ENST00000492606 VPS9D1Q9Y2B5 631 aa6.2□□□□□ -1.42
UBR4-215ENST00000492606 IRS2Q9Y4H2 1338 aa6.2□□□□□ -1.42
UBR4-215ENST00000492606 GPR25O00155 361 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 GPR37L1O60883 481 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 BCAMP50895 628 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 HUNKP57058 714 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 CSPP1Q1MSJ5 1256 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 BICDL1Q6ZP65 573 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 TTLL6Q8N841 843 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 ARMC5Q96C12 935 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 FAM161BQ96MY7 647 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 ARID3AQ99856 593 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 C5orf42Q9H799 3197 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 ADGRF5Q8IZF2 1346 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 ZNF292O60281 2723 aa6.19□□□□□ -1.42
UBR4-215ENST00000492606 CDH23Q9H251 3354 aa6.18□□□□□ -1.42
UBR4-215ENST00000492606 LRIT3Q3SXY7 679 aa6.18□□□□□ -1.42
UBR4-215ENST00000492606 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
UBR4-215ENST00000492606 LHX8Q68G74 356 aa6.18□□□□□ -1.42
UBR4-215ENST00000492606 CCDC82Q8N4S0 544 aa6.18□□□□□ -1.42
UBR4-215ENST00000492606 RDH13Q8NBN7 331 aa6.18□□□□□ -1.42
UBR4-215ENST00000492606 GLIS2Q9BZE0 524 aaPredicted RBP6.18□□□□□ -1.42
UBR4-215ENST00000492606 ZNF408Q9H9D4 720 aa6.18□□□□□ -1.42
UBR4-215ENST00000492606 TPRP12270 2363 aaKnown RBP6.18□□□□□ -1.42
UBR4-215ENST00000492606 WDFY4Q6ZS81 3184 aa6.18□□□□□ -1.42
UBR4-215ENST00000492606 MAP2P11137 1827 aaKnown RBP6.18□□□□□ -1.42
UBR4-215ENST00000492606 CPSF1Q10570 1443 aaKnown RBP6.17□□□□□ -1.42
UBR4-215ENST00000492606 ANKRD50Q9ULJ7 1429 aa6.17□□□□□ -1.42
UBR4-215ENST00000492606 RGMBQ6NW40 437 aa6.17□□□□□ -1.42
UBR4-215ENST00000492606 ARHGEF25Q86VW2 580 aa6.17□□□□□ -1.42
UBR4-215ENST00000492606 ZNF687Q8N1G0 1237 aa6.17□□□□□ -1.42
UBR4-215ENST00000492606 MARVELD3Q96A59 401 aa6.17□□□□□ -1.42
UBR4-215ENST00000492606 R3HDMLQ9H3Y0 253 aa6.17□□□□□ -1.42
UBR4-215ENST00000492606 TTC21AQ8NDW8 1320 aa6.17□□□□□ -1.42
UBR4-215ENST00000492606 POLR3AO14802 1390 aaPredicted RBP6.17□□□□□ -1.42
UBR4-215ENST00000492606 NAV2Q8IVL1 2488 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 C21orf2O43822 256 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 FDX1P10109 184 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 USP46P62068 366 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 DLK2Q6UY11 383 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 ANKRD24Q8TF21 1146 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 EPHX3Q9H6B9 360 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 GDPD2Q9HCC8 539 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 PLSCR2Q9NRY7 297 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 LTBP3Q9NS15 1303 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 DCHS1Q96JQ0 3298 aa6.16□□□□□ -1.42
UBR4-215ENST00000492606 CACNA1SQ13698 1873 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 FKTNO75072 461 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 EPS15P42566 896 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 NHLH1Q02575 133 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 ITPK1Q13572 414 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 OTOP1Q7RTM1 612 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 SAMD7Q7Z3H4 446 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 CDX2Q99626 313 aaPredicted RBP6.15□□□□□ -1.42
UBR4-215ENST00000492606 GDF15Q99988 308 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 TAOK3Q9H2K8 898 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 HMX1Q9NP08 348 aaPredicted RBP6.15□□□□□ -1.42
UBR4-215ENST00000492606 NLRP2Q9NX02 1062 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 TRIM17Q9Y577 477 aa6.15□□□□□ -1.42
UBR4-215ENST00000492606 CNTNAP4Q9C0A0 1308 aa6.15□□□□□ -1.43
UBR4-215ENST00000492606 ZNF318Q5VUA4 2279 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 MON2Q7Z3U7 1717 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 WASLO00401 505 aaPredicted RBP6.14□□□□□ -1.43
UBR4-215ENST00000492606 AP1G2O75843 785 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 USP17L8P0C7I0 530 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 HMGB2P26583 209 aaKnown RBP6.14□□□□□ -1.43
UBR4-215ENST00000492606 BMP8BP34820 402 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 PBX2P40425 430 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 CTDSPL2Q05D32 466 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 FUT2Q10981 343 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 IRF5Q13568 498 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 NOM1Q5C9Z4 860 aaKnown RBP6.14□□□□□ -1.43
UBR4-215ENST00000492606 TRAPPC3LQ5T215 181 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 FAM109BQ6ICB4 259 aaPredicted RBP6.14□□□□□ -1.43
UBR4-215ENST00000492606 ADAMTS19Q8TE59 1207 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 ZNF333Q96JL9 665 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 TRIM34Q9BYJ4 488 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 C11orf16Q9NQ32 467 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 TBC1D2BQ9UPU7 963 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 NR2E3Q9Y5X4 410 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 RPGRIP1LQ68CZ1 1315 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 VPS8Q8N3P4 1428 aa6.14□□□□□ -1.43
UBR4-215ENST00000492606 AFDNP55196 1824 aaKnown RBP6.13□□□□□ -1.43
UBR4-215ENST00000492606 FAM205CA6NFA0 338 aa6.13□□□□□ -1.43
UBR4-215ENST00000492606 CFAP99D6REC4 459 aa6.13□□□□□ -1.43
UBR4-215ENST00000492606 HRO43593 1189 aa6.13□□□□□ -1.43
UBR4-215ENST00000492606 ZNF157P51786 506 aaPredicted RBP6.13□□□□□ -1.43
UBR4-215ENST00000492606 LAPTM4BQ86VI4 370 aa6.13□□□□□ -1.43
UBR4-215ENST00000492606 USP38Q8NB14 1042 aa6.13□□□□□ -1.43
UBR4-215ENST00000492606 SHISA4Q96DD7 197 aa6.13□□□□□ -1.43
UBR4-215ENST00000492606 NUDT16Q96DE0 195 aaKnown RBP6.13□□□□□ -1.43
UBR4-215ENST00000492606 NECAB3Q96P71 396 aaPredicted RBP6.13□□□□□ -1.43
UBR4-215ENST00000492606 UHRF1Q96T88 793 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms