RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 BCL2L13Q9BXK5 485 aa19.1■□□□□ 0.65
TOM1-215ENST00000491987 GGA1Q9UJY5 639 aa19.1■□□□□ 0.65
TOM1-215ENST00000491987 SPEF2Q9C093 1822 aa19.09■□□□□ 0.65
TOM1-215ENST00000491987 ECE2O60344 883 aa19.09■□□□□ 0.65
TOM1-215ENST00000491987 BEND3Q5T5X7 828 aa19.09■□□□□ 0.65
TOM1-215ENST00000491987 USP50Q70EL3 339 aaPredicted RBP19.09■□□□□ 0.65
TOM1-215ENST00000491987 CNTROBQ8N137 903 aa19.09■□□□□ 0.65
TOM1-215ENST00000491987 ZC3H12CQ9C0D7 883 aaKnown RBP19.09■□□□□ 0.65
TOM1-215ENST00000491987 CREBZFQ9NS37 354 aa19.09■□□□□ 0.65
TOM1-215ENST00000491987 ADARB2Q9NS39 739 aaKnown RBP19.09■□□□□ 0.65
TOM1-215ENST00000491987 XDHP47989 1333 aa19.08■□□□□ 0.65
TOM1-215ENST00000491987 E9PSI1 815 aa19.08■□□□□ 0.64
TOM1-215ENST00000491987 CCER2I3L3R5 266 aa19.08■□□□□ 0.64
TOM1-215ENST00000491987 PLA2G12BQ9BX93 195 aa19.08■□□□□ 0.64
TOM1-215ENST00000491987 PSMD14O00487 310 aa19.07■□□□□ 0.64
TOM1-215ENST00000491987 FAM161AQ3B820 660 aa19.07■□□□□ 0.64
TOM1-215ENST00000491987 JMYQ8N9B5 988 aa19.07■□□□□ 0.64
TOM1-215ENST00000491987 KCNQ5Q9NR82 932 aa19.07■□□□□ 0.64
TOM1-215ENST00000491987 ZBTB12Q9Y330 459 aaPredicted RBP19.07■□□□□ 0.64
TOM1-215ENST00000491987 G3V3G9 751 aa19.06■□□□□ 0.64
TOM1-215ENST00000491987 ITGA6P23229 1130 aa19.06■□□□□ 0.64
TOM1-215ENST00000491987 DCAF8Q5TAQ9 597 aa19.06■□□□□ 0.64
TOM1-215ENST00000491987 BSDC1Q9NW68 430 aaPredicted RBP19.06■□□□□ 0.64
TOM1-215ENST00000491987 MKRN1Q9UHC7 482 aaKnown RBP19.06■□□□□ 0.64
TOM1-215ENST00000491987 SHTN1A0MZ66 631 aa19.05■□□□□ 0.64
TOM1-215ENST00000491987 CSF1RP07333 972 aa19.05■□□□□ 0.64
TOM1-215ENST00000491987 ATP2B4P23634 1241 aa19.05■□□□□ 0.64
TOM1-215ENST00000491987 IGHMBP2P38935 993 aaKnown RBP19.05■□□□□ 0.64
TOM1-215ENST00000491987 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
TOM1-215ENST00000491987 SLC4A10Q6U841 1118 aa19.05■□□□□ 0.64
TOM1-215ENST00000491987 CNOT7Q9UIV1 285 aaKnown RBP19.05■□□□□ 0.64
TOM1-215ENST00000491987 MINPP1Q9UNW1 487 aa19.05■□□□□ 0.64
TOM1-215ENST00000491987 WTIPA6NIX2 430 aaPredicted RBP19.04■□□□□ 0.64
TOM1-215ENST00000491987 TMEM88BA6NKF7 163 aa19.04■□□□□ 0.64
TOM1-215ENST00000491987 MICALL2Q8IY33 904 aa19.04■□□□□ 0.64
TOM1-215ENST00000491987 TRPM4Q8TD43 1214 aa19.04■□□□□ 0.64
TOM1-215ENST00000491987 CDCA7LQ96GN5 454 aa19.04■□□□□ 0.64
TOM1-215ENST00000491987 H7C1D1 291 aa19.03■□□□□ 0.64
TOM1-215ENST00000491987 FMR1Q06787 632 aaKnown RBP eCLIP19.03■□□□□ 0.64
TOM1-215ENST00000491987 MRPL50Q8N5N7 158 aaKnown RBP19.03■□□□□ 0.64
TOM1-215ENST00000491987 GRM8O00222 908 aa19.02■□□□□ 0.64
TOM1-215ENST00000491987 HIRAP54198 1017 aaPredicted RBP19.02■□□□□ 0.64
TOM1-215ENST00000491987 FOXO4P98177 505 aa19.02■□□□□ 0.64
TOM1-215ENST00000491987 DPF2Q92785 391 aa19.02■□□□□ 0.64
TOM1-215ENST00000491987 MPHOSPH8Q99549 860 aa19.02■□□□□ 0.64
TOM1-215ENST00000491987 SRCIN1Q9C0H9 1055 aa19.02■□□□□ 0.64
TOM1-215ENST00000491987 CHMP3Q9Y3E7 222 aa19.02■□□□□ 0.64
TOM1-215ENST00000491987 SCN9AQ15858 1988 aa19.01■□□□□ 0.63
TOM1-215ENST00000491987 ANKRD18BA2A2Z9 1011 aa19.01■□□□□ 0.63
TOM1-215ENST00000491987 TRAF5O00463 557 aa19.01■□□□□ 0.63
TOM1-215ENST00000491987 CCT4P50991 539 aaKnown RBP19.01■□□□□ 0.63
TOM1-215ENST00000491987 C9orf78Q9NZ63 289 aaPredicted RBP19.01■□□□□ 0.63
TOM1-215ENST00000491987 CNTNAP1P78357 1384 aa19.01■□□□□ 0.63
TOM1-215ENST00000491987 MED23Q9ULK4 1368 aa19.01■□□□□ 0.63
TOM1-215ENST00000491987 ALDH1L1O75891 902 aa19■□□□□ 0.63
TOM1-215ENST00000491987 RPS12P25398 132 aaKnown RBP19■□□□□ 0.63
TOM1-215ENST00000491987 EPHA10Q5JZY3 1008 aa19■□□□□ 0.63
TOM1-215ENST00000491987 SAMD7Q7Z3H4 446 aa19■□□□□ 0.63
TOM1-215ENST00000491987 SSH1Q8WYL5 1049 aa19■□□□□ 0.63
TOM1-215ENST00000491987 VIL1P09327 827 aaKnown RBP18.99■□□□□ 0.63
TOM1-215ENST00000491987 TBC1D10BQ4KMP7 808 aaPredicted RBP18.99■□□□□ 0.63
TOM1-215ENST00000491987 LMBR1LQ6UX01 489 aa18.99■□□□□ 0.63
TOM1-215ENST00000491987 GLIS2Q9BZE0 524 aaPredicted RBP18.99■□□□□ 0.63
TOM1-215ENST00000491987 IFIT5Q13325 482 aaKnown RBP18.98■□□□□ 0.63
TOM1-215ENST00000491987 ANKRD2Q9GZV1 360 aa18.98■□□□□ 0.63
TOM1-215ENST00000491987 PGAP2Q9UHJ9 254 aa18.98■□□□□ 0.63
TOM1-215ENST00000491987 ABT1Q9ULW3 272 aaKnown RBP18.98■□□□□ 0.63
TOM1-215ENST00000491987 LEMD3Q9Y2U8 911 aa18.98■□□□□ 0.63
TOM1-215ENST00000491987 ZNF804BA4D1E1 1349 aa18.98■□□□□ 0.63
TOM1-215ENST00000491987 PTPRCP08575 1304 aa18.98■□□□□ 0.63
TOM1-215ENST00000491987 EGFRP00533 1210 aa18.97■□□□□ 0.63
TOM1-215ENST00000491987 CHRNDQ07001 517 aa18.97■□□□□ 0.63
TOM1-215ENST00000491987 RBM26Q5T8P6 1007 aaKnown RBP18.97■□□□□ 0.63
TOM1-215ENST00000491987 RSBN1LQ6PCB5 846 aaPredicted RBP18.97■□□□□ 0.63
TOM1-215ENST00000491987 PODNQ7Z5L7 613 aa18.97■□□□□ 0.63
TOM1-215ENST00000491987 TRMT2AQ8IZ69 625 aaKnown RBP18.97■□□□□ 0.63
TOM1-215ENST00000491987 ZC3H15Q8WU90 426 aaKnown RBP18.97■□□□□ 0.63
TOM1-215ENST00000491987 PSME4Q14997 1843 aa18.96■□□□□ 0.63
TOM1-215ENST00000491987 HSPA1AP0DMV8 641 aaKnown RBP18.96■□□□□ 0.63
TOM1-215ENST00000491987 HSPA1BP0DMV9 641 aaKnown RBP18.96■□□□□ 0.63
TOM1-215ENST00000491987 KLRK1P26718 216 aa18.96■□□□□ 0.63
TOM1-215ENST00000491987 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
TOM1-215ENST00000491987 SUCLG2Q96I99 432 aa18.96■□□□□ 0.63
TOM1-215ENST00000491987 ZNF594Q96JF6 807 aaPredicted RBP18.96■□□□□ 0.63
TOM1-215ENST00000491987 SMC4Q9NTJ3 1288 aa18.96■□□□□ 0.63
TOM1-215ENST00000491987 ZNF609O15014 1411 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 USP17L3A6NCW0 530 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 USP17L4A6NCW7 530 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 RASSF10A6NK89 507 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 NBPF7P0C2Y1 421 aaPredicted RBP18.95■□□□□ 0.62
TOM1-215ENST00000491987 KCNJ4P48050 445 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 VEGFBP49765 207 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 CCDC57Q2TAC2 916 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 ALDH1L2Q3SY69 923 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 USP17L1Q7RTZ2 530 aa18.95■□□□□ 0.62
TOM1-215ENST00000491987 HELBQ8NG08 1087 aaPredicted RBP18.95■□□□□ 0.62
TOM1-215ENST00000491987 TAF5LO75529 589 aa18.94■□□□□ 0.62
TOM1-215ENST00000491987 KIF4BQ2VIQ3 1234 aa18.94■□□□□ 0.62
TOM1-215ENST00000491987 DEFB115Q30KQ5 88 aa18.94■□□□□ 0.62
TOM1-215ENST00000491987 TAF7LQ5H9L4 462 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms