RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PGAP2Q9UHJ9 254 aa11.22□□□□□ -0.61
NUP50-217ENST00000491860 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
NUP50-217ENST00000491860 MYH3P11055 1940 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 G3V3G9 751 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
NUP50-217ENST00000491860 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 ANKRD18AQ8IVF6 992 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 MYH16Q9H6N6 1097 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 ANKIB1Q9P2G1 1089 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 CNOT7Q9UIV1 285 aaKnown RBP11.21□□□□□ -0.61
NUP50-217ENST00000491860 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
NUP50-217ENST00000491860 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.62
NUP50-217ENST00000491860 XDHP47989 1333 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 ECE2O60344 883 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 RAD17O75943 681 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 GPSM2P81274 684 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 TBC1D16Q8TBP0 767 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 POLLQ9UGP5 575 aa11.2□□□□□ -0.62
NUP50-217ENST00000491860 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
NUP50-217ENST00000491860 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
NUP50-217ENST00000491860 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
NUP50-217ENST00000491860 ATP2B4P23634 1241 aa11.19□□□□□ -0.62
NUP50-217ENST00000491860 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
NUP50-217ENST00000491860 CTSWP56202 376 aa11.19□□□□□ -0.62
NUP50-217ENST00000491860 FMR1Q06787 632 aaKnown RBP eCLIP11.19□□□□□ -0.62
NUP50-217ENST00000491860 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
NUP50-217ENST00000491860 TSPYL6Q8N831 410 aa11.19□□□□□ -0.62
NUP50-217ENST00000491860 TSR2Q969E8 191 aaKnown RBP11.19□□□□□ -0.62
NUP50-217ENST00000491860 ZNF609O15014 1411 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 TRAF5O00463 557 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 PSMD14O00487 310 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 UFL1O94874 794 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 MMP14P50281 582 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
NUP50-217ENST00000491860 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 AGBL3Q8NEM8 1001 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 MCOLN1Q9GZU1 580 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 DBNDD1Q9H9R9 158 aa11.18□□□□□ -0.62
NUP50-217ENST00000491860 BSDC1Q9NW68 430 aaPredicted RBP11.18□□□□□ -0.62
NUP50-217ENST00000491860 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
NUP50-217ENST00000491860 IGKV5-2P06315 115 aa11.17□□□□□ -0.62
NUP50-217ENST00000491860 FLIIQ13045 1269 aa11.17□□□□□ -0.62
NUP50-217ENST00000491860 CCDC184Q52MB2 194 aa11.17□□□□□ -0.62
NUP50-217ENST00000491860 PODNQ7Z5L7 613 aa11.17□□□□□ -0.62
NUP50-217ENST00000491860 ZNF428Q96B54 188 aa11.17□□□□□ -0.62
NUP50-217ENST00000491860 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
NUP50-217ENST00000491860 PSME4Q14997 1843 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 FANCIQ9NVI1 1328 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 AOC2O75106 756 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 CELF2O95319 508 aaKnown RBP11.16□□□□□ -0.62
NUP50-217ENST00000491860 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
NUP50-217ENST00000491860 IGHMBP2P38935 993 aaKnown RBP11.16□□□□□ -0.62
NUP50-217ENST00000491860 FKBP5Q13451 457 aaPredicted RBP11.16□□□□□ -0.62
NUP50-217ENST00000491860 LINS1Q8NG48 757 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 TTLL11Q8NHH1 800 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 DNAAF4Q8WXU2 420 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 DCPSQ96C86 337 aaKnown RBP11.16□□□□□ -0.62
NUP50-217ENST00000491860 PLA2G12BQ9BX93 195 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 CASP8AP2Q9UKL3 1982 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
NUP50-217ENST00000491860 MYO3BQ8WXR4 1341 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 H7C1W4 665 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 GRM1Q13255 1194 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 GCKRQ14397 625 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 TRPM4Q8TD43 1214 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 GLIS2Q9BZE0 524 aaPredicted RBP11.15□□□□□ -0.62
NUP50-217ENST00000491860 ANKRD2Q9GZV1 360 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 LEMD3Q9Y2U8 911 aa11.15□□□□□ -0.62
NUP50-217ENST00000491860 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 VAMP4O75379 141 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 HIRAP54198 1017 aaPredicted RBP11.14□□□□□ -0.63
NUP50-217ENST00000491860 NOGQ13253 232 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 RSBN1LQ6PCB5 846 aaPredicted RBP11.14□□□□□ -0.63
NUP50-217ENST00000491860 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 UBE3BQ7Z3V4 1068 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 GREM2Q9H772 168 aa11.14□□□□□ -0.63
NUP50-217ENST00000491860 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
NUP50-217ENST00000491860 CCT4P50991 539 aaKnown RBP11.13□□□□□ -0.63
NUP50-217ENST00000491860 DGKZQ13574 1117 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 CWF19L2Q2TBE0 894 aaKnown RBP11.13□□□□□ -0.63
NUP50-217ENST00000491860 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 TBC1D10BQ4KMP7 808 aaPredicted RBP11.13□□□□□ -0.63
NUP50-217ENST00000491860 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 SULF1Q8IWU6 871 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 CCDC85AQ96PX6 553 aaPredicted RBP11.13□□□□□ -0.63
NUP50-217ENST00000491860 COA1Q9GZY4 146 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
NUP50-217ENST00000491860 PITPNM2Q9BZ72 1349 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms