RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 UTYO14607 1347 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 MARCH6O60337 910 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 IGSF3O75054 1194 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 HMGB1P09429 215 aaKnown RBP12.62□□□□□ -0.39
SNED1-211ENST00000491761 HMGN5P82970 282 aaKnown RBP12.62□□□□□ -0.39
SNED1-211ENST00000491761 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 EDC3Q96F86 508 aaKnown RBP12.62□□□□□ -0.39
SNED1-211ENST00000491761 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
SNED1-211ENST00000491761 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
SNED1-211ENST00000491761 SPDYE4A6NLX3 237 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 PXDNQ92626 1479 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 ZBTB9Q96C00 473 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 DBNDD2Q9BQY9 259 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 GOLIM4O00461 696 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 WASHC4Q2M389 1173 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
SNED1-211ENST00000491761 DHX37Q8IY37 1157 aaKnown RBP12.61□□□□□ -0.39
SNED1-211ENST00000491761 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
SNED1-211ENST00000491761 EPHA10Q5JZY3 1008 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 CEP126Q9P2H0 1117 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 NFAT5O94916 1531 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 PDIA6Q15084 440 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 DDX19AQ9NUU7 478 aaKnown RBP12.6□□□□□ -0.39
SNED1-211ENST00000491761 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNED1-211ENST00000491761 TRIM29Q14134 588 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 Q6ZUG5 572 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
SNED1-211ENST00000491761 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 DBNLQ9UJU6 430 aaKnown RBP12.6□□□□□ -0.39
SNED1-211ENST00000491761 TAF5LO75529 589 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 IFIT1P09914 478 aaKnown RBP12.6□□□□□ -0.39
SNED1-211ENST00000491761 TERF1P54274 439 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 CCDC158Q5M9N0 1113 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 DDX17Q92841 729 aaKnown RBP12.6□□□□□ -0.39
SNED1-211ENST00000491761 KCNB2Q92953 911 aa12.6□□□□□ -0.39
SNED1-211ENST00000491761 CCDC112Q8NEF3 446 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 BRF1Q92994 677 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
SNED1-211ENST00000491761 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
SNED1-211ENST00000491761 CCDC57Q2TAC2 916 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 ZNF589Q86UQ0 364 aaPredicted RBP12.59□□□□□ -0.39
SNED1-211ENST00000491761 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 NDUFB9Q9Y6M9 179 aa12.59□□□□□ -0.39
SNED1-211ENST00000491761 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
SNED1-211ENST00000491761 PTPN12Q05209 780 aaKnown RBP12.58□□□□□ -0.4
SNED1-211ENST00000491761 NFXL1Q6ZNB6 911 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 CKAP2LQ8IYA6 745 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 ZNF396Q96N95 335 aaPredicted RBP12.58□□□□□ -0.4
SNED1-211ENST00000491761 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNED1-211ENST00000491761 TTC39AQ5SRH9 613 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
SNED1-211ENST00000491761 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
SNED1-211ENST00000491761 ZSCAN16Q9H4T2 348 aaPredicted RBP12.58□□□□□ -0.4
SNED1-211ENST00000491761 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 GPS2Q13227 327 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 KBTBD3Q8NAB2 608 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
SNED1-211ENST00000491761 PDCL2Q8N4E4 241 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 LTN1O94822 1766 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 HAUS7Q99871 368 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 CTNNA3Q9UI47 895 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 TTC6Q86TZ1 520 aa12.57□□□□□ -0.4
SNED1-211ENST00000491761 TTC12Q9H892 705 aaPredicted RBP12.56□□□□□ -0.4
SNED1-211ENST00000491761 C1orf167Q5SNV9 1468 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 RAD21O60216 631 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 KIF6Q6ZMV9 814 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 DHX32Q7L7V1 743 aaKnown RBP12.56□□□□□ -0.4
SNED1-211ENST00000491761 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 AKAP2Q9Y2D5 859 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 CYP27B1O15528 508 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 TPM1P09493 284 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 TYRO3Q06418 890 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 ARGLU1Q9NWB6 273 aaPredicted RBP12.56□□□□□ -0.4
SNED1-211ENST00000491761 ME1P48163 572 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 TIMM10P62072 90 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 GTF3C6Q969F1 213 aa12.56□□□□□ -0.4
SNED1-211ENST00000491761 SEC62Q99442 399 aaKnown RBP12.56□□□□□ -0.4
SNED1-211ENST00000491761 NOLC1Q14978 699 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNED1-211ENST00000491761 C16orf45Q96MC5 204 aaPredicted RBP12.55□□□□□ -0.4
SNED1-211ENST00000491761 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
SNED1-211ENST00000491761 JAK2O60674 1132 aa12.55□□□□□ -0.4
SNED1-211ENST00000491761 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
SNED1-211ENST00000491761 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
SNED1-211ENST00000491761 ELP1O95163 1332 aa12.55□□□□□ -0.4
SNED1-211ENST00000491761 EYA2O00167 538 aa12.55□□□□□ -0.4
SNED1-211ENST00000491761 DHX16O60231 1041 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms