RNA–Protein interactions for RNA: ENST00000491525.5

NECTIN3-210, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-210ENST00000491525 ZNF530Q6P9A1 599 aaPredicted RBP10.11□□□□□ -0.79
NECTIN3-210ENST00000491525 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
NECTIN3-210ENST00000491525 PIGBQ92521 554 aa10.11□□□□□ -0.79
NECTIN3-210ENST00000491525 PDGFDQ9GZP0 370 aaPredicted RBP10.11□□□□□ -0.79
NECTIN3-210ENST00000491525 STK32BQ9NY57 414 aa10.11□□□□□ -0.79
NECTIN3-210ENST00000491525 KAT6BQ8WYB5 2073 aa10.11□□□□□ -0.79
NECTIN3-210ENST00000491525 PPP2R1AP30153 589 aa10.1□□□□□ -0.79
NECTIN3-210ENST00000491525 KCNQ4P56696 695 aa10.1□□□□□ -0.79
NECTIN3-210ENST00000491525 MPRIPQ6WCQ1 1025 aa10.1□□□□□ -0.79
NECTIN3-210ENST00000491525 TLL2Q9Y6L7 1015 aa10.1□□□□□ -0.79
NECTIN3-210ENST00000491525 CAPN5O15484 640 aaPredicted RBP10.09□□□□□ -0.79
NECTIN3-210ENST00000491525 HMOX1P09601 288 aa10.09□□□□□ -0.79
NECTIN3-210ENST00000491525 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
NECTIN3-210ENST00000491525 CCNL1Q9UK58 526 aaPredicted RBP10.09□□□□□ -0.79
NECTIN3-210ENST00000491525 QSER1Q2KHR3 1735 aa10.09□□□□□ -0.79
NECTIN3-210ENST00000491525 MRC1P22897 1456 aa10.09□□□□□ -0.79
NECTIN3-210ENST00000491525 C5P01031 1676 aa10.09□□□□□ -0.79
NECTIN3-210ENST00000491525 TUBGCP6Q96RT7 1819 aa10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 HSP90AB1P08238 724 aaKnown RBP10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 ARID5BQ14865 1188 aa10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 FOXJ1Q92949 421 aa10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 ADAMTS7Q9UKP4 1686 aa10.08□□□□□ -0.8
NECTIN3-210ENST00000491525 PNPLA7Q6ZV29 1317 aa10.07□□□□□ -0.8
NECTIN3-210ENST00000491525 ERVV-2B6SEH9 535 aa10.07□□□□□ -0.8
NECTIN3-210ENST00000491525 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
NECTIN3-210ENST00000491525 C1orf141Q5JVX7 400 aa10.07□□□□□ -0.8
NECTIN3-210ENST00000491525 SPON1Q9HCB6 807 aa10.07□□□□□ -0.8
NECTIN3-210ENST00000491525 ASAP1Q9ULH1 1129 aa10.07□□□□□ -0.8
NECTIN3-210ENST00000491525 TAF1LQ8IZX4 1826 aa10.06□□□□□ -0.8
NECTIN3-210ENST00000491525 U2SURPO15042 1029 aaKnown RBP10.06□□□□□ -0.8
NECTIN3-210ENST00000491525 NNTQ13423 1086 aa10.06□□□□□ -0.8
NECTIN3-210ENST00000491525 AKAP4Q5JQC9 854 aa10.06□□□□□ -0.8
NECTIN3-210ENST00000491525 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
NECTIN3-210ENST00000491525 CFAP53Q96M91 514 aa10.06□□□□□ -0.8
NECTIN3-210ENST00000491525 ATG3Q9NT62 314 aa10.06□□□□□ -0.8
NECTIN3-210ENST00000491525 C4BP0C0L5 1744 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 LOC102724428A0A0B4J2F2 783 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 ZBTB7AO95365 584 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 SIK1P57059 783 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 MTHFSDQ2M296 383 aaKnown RBP10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 GPKOWQ92917 476 aaPredicted RBP eCLIP10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 MTFR1LQ9H019 292 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 SCN11AQ9UI33 1791 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 ZNF831Q5JPB2 1677 aa10.05□□□□□ -0.8
NECTIN3-210ENST00000491525 CICQ96RK0 1608 aaPredicted RBP10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 ADH1CP00326 375 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 CABP4P57796 275 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 DDX10Q13206 875 aaKnown RBP10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 ITPK1Q13572 414 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 CDK15Q96Q40 435 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 SLC4A9Q96Q91 983 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 TFCP2L1Q9NZI6 479 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 COL24A1Q17RW2 1714 aa10.04□□□□□ -0.8
NECTIN3-210ENST00000491525 MAP3K5Q99683 1374 aa10.03□□□□□ -0.8
NECTIN3-210ENST00000491525 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
NECTIN3-210ENST00000491525 PRKAR2BP31323 418 aa10.03□□□□□ -0.8
NECTIN3-210ENST00000491525 PPP2R2DQ66LE6 453 aa10.03□□□□□ -0.8
NECTIN3-210ENST00000491525 AMIGO3Q86WK7 504 aa10.03□□□□□ -0.8
NECTIN3-210ENST00000491525 LINC00116Q8NCU8 138 aa10.03□□□□□ -0.8
NECTIN3-210ENST00000491525 NUDCQ9Y266 331 aa10.03□□□□□ -0.8
NECTIN3-210ENST00000491525 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 AP1G2O75843 785 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 NR5A1Q13285 461 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 NFATC2IPQ8NCF5 419 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 GAS2L2Q8NHY3 880 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 SLC16A10Q8TF71 515 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 PHACTR3Q96KR7 559 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 SLC52A2Q9HAB3 445 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 LGR6Q9HBX8 967 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 UBR3Q6ZT12 1888 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 KCPQ6ZWJ8 1503 aa10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.81
NECTIN3-210ENST00000491525 CEMIPQ8WUJ3 1361 aa10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 U2AF1L5P0DN76 240 aaPredicted RBP10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 SNRPBP14678 240 aaKnown RBP10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 HMGB2P26583 209 aaKnown RBP10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 U2AF1Q01081 240 aaKnown RBP eCLIP10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 RALBP1Q15311 655 aa10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 COL23A1Q86Y22 540 aaPredicted RBP10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 TJP1Q07157 1748 aa10.01□□□□□ -0.81
NECTIN3-210ENST00000491525 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
NECTIN3-210ENST00000491525 TREML4Q6UXN2 200 aa10□□□□□ -0.81
NECTIN3-210ENST00000491525 PNMA1Q8ND90 353 aa10□□□□□ -0.81
NECTIN3-210ENST00000491525 LRRN4Q8WUT4 740 aa10□□□□□ -0.81
NECTIN3-210ENST00000491525 PPP1R1BQ9UD71 204 aaPredicted RBP10□□□□□ -0.81
NECTIN3-210ENST00000491525 VIRMAQ69YN4 1812 aaKnown RBP9.99□□□□□ -0.81
NECTIN3-210ENST00000491525 GNAT3A8MTJ3 354 aa9.99□□□□□ -0.81
NECTIN3-210ENST00000491525 PTCD1O75127 700 aaKnown RBP9.99□□□□□ -0.81
NECTIN3-210ENST00000491525 BMP1P13497 986 aa9.99□□□□□ -0.81
NECTIN3-210ENST00000491525 SSFA2P28290 1259 aa9.99□□□□□ -0.81
NECTIN3-210ENST00000491525 SCARF1Q14162 830 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms