RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 CAPN15O75808 1086 aa10.64□□□□□ -0.71
APP-216ENST00000491395 UFL1O94874 794 aa10.64□□□□□ -0.71
APP-216ENST00000491395 CELF2O95319 508 aaKnown RBP10.64□□□□□ -0.71
APP-216ENST00000491395 CWF19L2Q2TBE0 894 aaKnown RBP10.64□□□□□ -0.71
APP-216ENST00000491395 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
APP-216ENST00000491395 DLK2Q6UY11 383 aa10.64□□□□□ -0.71
APP-216ENST00000491395 PAXIP1Q6ZW49 1069 aaPredicted RBP10.64□□□□□ -0.71
APP-216ENST00000491395 SAMD7Q7Z3H4 446 aa10.64□□□□□ -0.71
APP-216ENST00000491395 ZC3H12CQ9C0D7 883 aaKnown RBP10.64□□□□□ -0.71
APP-216ENST00000491395 WBP1LQ9NX94 342 aa10.64□□□□□ -0.71
APP-216ENST00000491395 ANKRD36CQ5JPF3 1778 aa10.64□□□□□ -0.71
APP-216ENST00000491395 RTL9Q8NET4 1388 aa10.64□□□□□ -0.71
APP-216ENST00000491395 PCNTO95613 3336 aa10.63□□□□□ -0.71
APP-216ENST00000491395 LAMB2P55268 1798 aa10.63□□□□□ -0.71
APP-216ENST00000491395 WTIPA6NIX2 430 aaPredicted RBP10.63□□□□□ -0.71
APP-216ENST00000491395 NEURL1BA8MQ27 555 aa10.63□□□□□ -0.71
APP-216ENST00000491395 EGFRP00533 1210 aa10.63□□□□□ -0.71
APP-216ENST00000491395 CTSWP56202 376 aa10.63□□□□□ -0.71
APP-216ENST00000491395 NEXNQ0ZGT2 675 aa10.63□□□□□ -0.71
APP-216ENST00000491395 GRM1Q13255 1194 aa10.63□□□□□ -0.71
APP-216ENST00000491395 TBC1D10BQ4KMP7 808 aaPredicted RBP10.63□□□□□ -0.71
APP-216ENST00000491395 RBM26Q5T8P6 1007 aaKnown RBP10.63□□□□□ -0.71
APP-216ENST00000491395 CYP4F22Q6NT55 531 aa10.63□□□□□ -0.71
APP-216ENST00000491395 USP48Q86UV5 1035 aa10.63□□□□□ -0.71
APP-216ENST00000491395 ANKRD18AQ8IVF6 992 aa10.63□□□□□ -0.71
APP-216ENST00000491395 TTLL11Q8NHH1 800 aa10.63□□□□□ -0.71
APP-216ENST00000491395 ZC3H15Q8WU90 426 aaKnown RBP10.63□□□□□ -0.71
APP-216ENST00000491395 DPF2Q92785 391 aa10.63□□□□□ -0.71
APP-216ENST00000491395 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
APP-216ENST00000491395 CAPNS2Q96L46 248 aa10.63□□□□□ -0.71
APP-216ENST00000491395 GGA1Q9UJY5 639 aa10.63□□□□□ -0.71
APP-216ENST00000491395 FANCIQ9NVI1 1328 aa10.62□□□□□ -0.71
APP-216ENST00000491395 TAF1P21675 1872 aa10.62□□□□□ -0.71
APP-216ENST00000491395 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
APP-216ENST00000491395 G3V3G9 751 aa10.62□□□□□ -0.71
APP-216ENST00000491395 H7C1W4 665 aa10.62□□□□□ -0.71
APP-216ENST00000491395 VAMP4O75379 141 aa10.62□□□□□ -0.71
APP-216ENST00000491395 CTCFP49711 727 aaPredicted RBP10.62□□□□□ -0.71
APP-216ENST00000491395 EXOSC9Q06265 439 aaKnown RBP10.62□□□□□ -0.71
APP-216ENST00000491395 FLIIQ13045 1269 aa10.62□□□□□ -0.71
APP-216ENST00000491395 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
APP-216ENST00000491395 CDC37L1Q7L3B6 337 aa10.62□□□□□ -0.71
APP-216ENST00000491395 WDR63Q8IWG1 891 aa10.62□□□□□ -0.71
APP-216ENST00000491395 GREM2Q9H772 168 aa10.62□□□□□ -0.71
APP-216ENST00000491395 ZNF408Q9H9D4 720 aa10.62□□□□□ -0.71
APP-216ENST00000491395 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
APP-216ENST00000491395 TLL2Q9Y6L7 1015 aa10.62□□□□□ -0.71
APP-216ENST00000491395 VIL1P09327 827 aaKnown RBP10.61□□□□□ -0.71
APP-216ENST00000491395 RPS12P25398 132 aaKnown RBP10.61□□□□□ -0.71
APP-216ENST00000491395 ECE1P42892 770 aa10.61□□□□□ -0.71
APP-216ENST00000491395 LBX1P52954 281 aa10.61□□□□□ -0.71
APP-216ENST00000491395 GCKRQ14397 625 aa10.61□□□□□ -0.71
APP-216ENST00000491395 UBE3BQ7Z3V4 1068 aa10.61□□□□□ -0.71
APP-216ENST00000491395 SAPCD2Q86UD0 394 aa10.61□□□□□ -0.71
APP-216ENST00000491395 FAM9BQ8IZU0 186 aa10.61□□□□□ -0.71
APP-216ENST00000491395 CDC5LQ99459 802 aaKnown RBP10.61□□□□□ -0.71
APP-216ENST00000491395 MINPP1Q9UNW1 487 aa10.61□□□□□ -0.71
APP-216ENST00000491395 XDHP47989 1333 aa10.6□□□□□ -0.71
APP-216ENST00000491395 AOC2O75106 756 aa10.6□□□□□ -0.71
APP-216ENST00000491395 ATP2B4P23634 1241 aa10.6□□□□□ -0.71
APP-216ENST00000491395 MAP2K1Q02750 393 aaPredicted RBP10.6□□□□□ -0.71
APP-216ENST00000491395 FKBP5Q13451 457 aaPredicted RBP10.6□□□□□ -0.71
APP-216ENST00000491395 DNAAF4Q8WXU2 420 aa10.6□□□□□ -0.71
APP-216ENST00000491395 PRDM10Q9NQV6 1147 aa10.6□□□□□ -0.71
APP-216ENST00000491395 BSDC1Q9NW68 430 aaPredicted RBP10.6□□□□□ -0.71
APP-216ENST00000491395 ADM5C9JUS6 153 aa10.59□□□□□ -0.71
APP-216ENST00000491395 HSPA8P11142 646 aaKnown RBP10.59□□□□□ -0.71
APP-216ENST00000491395 CASP7P55210 303 aa10.59□□□□□ -0.71
APP-216ENST00000491395 RSBN1LQ6PCB5 846 aaPredicted RBP10.59□□□□□ -0.71
APP-216ENST00000491395 KRT26Q7Z3Y9 468 aa10.59□□□□□ -0.71
APP-216ENST00000491395 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
APP-216ENST00000491395 ASTN2O75129 1339 aaPredicted RBP10.58□□□□□ -0.71
APP-216ENST00000491395 LRRC37AA6NMS7 1700 aa10.58□□□□□ -0.72
APP-216ENST00000491395 F6X3S4 739 aa10.58□□□□□ -0.72
APP-216ENST00000491395 CSF1RP07333 972 aa10.58□□□□□ -0.72
APP-216ENST00000491395 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
APP-216ENST00000491395 ZNF280AP59817 542 aaPredicted RBP10.58□□□□□ -0.72
APP-216ENST00000491395 KIF4BQ2VIQ3 1234 aa10.58□□□□□ -0.72
APP-216ENST00000491395 AGBL3Q8NEM8 1001 aa10.58□□□□□ -0.72
APP-216ENST00000491395 DCPSQ96C86 337 aaKnown RBP10.58□□□□□ -0.72
APP-216ENST00000491395 GMLQ99445 158 aa10.58□□□□□ -0.72
APP-216ENST00000491395 PLA2G12BQ9BX93 195 aa10.58□□□□□ -0.72
APP-216ENST00000491395 MYH16Q9H6N6 1097 aa10.58□□□□□ -0.72
APP-216ENST00000491395 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
APP-216ENST00000491395 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
APP-216ENST00000491395 ITGA6P23229 1130 aa10.57□□□□□ -0.72
APP-216ENST00000491395 MAP2K2P36507 400 aa10.57□□□□□ -0.72
APP-216ENST00000491395 IGHMBP2P38935 993 aaKnown RBP10.57□□□□□ -0.72
APP-216ENST00000491395 HUNKP57058 714 aa10.57□□□□□ -0.72
APP-216ENST00000491395 SCARF1Q14162 830 aa10.57□□□□□ -0.72
APP-216ENST00000491395 FAM161AQ3B820 660 aa10.57□□□□□ -0.72
APP-216ENST00000491395 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
APP-216ENST00000491395 PODNQ7Z5L7 613 aa10.57□□□□□ -0.72
APP-216ENST00000491395 TXNRD3Q86VQ6 643 aa10.57□□□□□ -0.72
APP-216ENST00000491395 HHIPL1Q96JK4 782 aa10.57□□□□□ -0.72
APP-216ENST00000491395 ZIC5Q96T25 663 aa10.57□□□□□ -0.72
APP-216ENST00000491395 MXD3Q9BW11 206 aa10.57□□□□□ -0.72
APP-216ENST00000491395 USP17L8P0C7I0 530 aa10.56□□□□□ -0.72
APP-216ENST00000491395 KLRK1P26718 216 aa10.56□□□□□ -0.72
APP-216ENST00000491395 BEND3Q5T5X7 828 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms