RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 F8W735 103 aaPredicted RBP9□□□□□ -0.97
PHC3-213ENST00000491258 SOX18P35713 384 aa9□□□□□ -0.97
PHC3-213ENST00000491258 NLRP13Q86W25 1043 aa9□□□□□ -0.97
PHC3-213ENST00000491258 SAP130Q9H0E3 1048 aa9□□□□□ -0.97
PHC3-213ENST00000491258 TRIM33Q9UPN9 1127 aa9□□□□□ -0.97
PHC3-213ENST00000491258 BRD2P25440 801 aaKnown RBP8.99□□□□□ -0.97
PHC3-213ENST00000491258 TRIP4Q15650 581 aaPredicted RBP8.99□□□□□ -0.97
PHC3-213ENST00000491258 DZIP1LQ8IYY4 767 aaKnown RBP8.99□□□□□ -0.97
PHC3-213ENST00000491258 SRA1Q9HD15 236 aaKnown RBP8.99□□□□□ -0.97
PHC3-213ENST00000491258 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
PHC3-213ENST00000491258 UBAP1LF5GYI3 381 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 HOXD8P13378 290 aaPredicted RBP8.98□□□□□ -0.97
PHC3-213ENST00000491258 FSTP19883 344 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 SETDB1Q15047 1291 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 SWI5Q1ZZU3 235 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 C16orf46Q6P387 395 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 TMEM130Q8N3G9 435 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 DCAF11Q8TEB1 546 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 GOLGA2P5Q9HBQ8 144 aa8.98□□□□□ -0.97
PHC3-213ENST00000491258 GLB1P16278 677 aa8.97□□□□□ -0.97
PHC3-213ENST00000491258 MAP4K3Q8IVH8 894 aa8.97□□□□□ -0.97
PHC3-213ENST00000491258 AGGF1Q8N302 714 aaeCLIP8.97□□□□□ -0.97
PHC3-213ENST00000491258 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
PHC3-213ENST00000491258 ZMIZ1Q9ULJ6 1067 aa8.96□□□□□ -0.98
PHC3-213ENST00000491258 OCLNQ16625 522 aa8.95□□□□□ -0.98
PHC3-213ENST00000491258 FAM26DQ5JW98 314 aa8.95□□□□□ -0.98
PHC3-213ENST00000491258 PIK3R5Q8WYR1 880 aa8.95□□□□□ -0.98
PHC3-213ENST00000491258 MUC3BQ9H195 1237 aa8.95□□□□□ -0.98
PHC3-213ENST00000491258 PCMTD2Q9NV79 361 aa8.95□□□□□ -0.98
PHC3-213ENST00000491258 FAM13BQ9NYF5 915 aa8.95□□□□□ -0.98
PHC3-213ENST00000491258 PPME1Q9Y570 386 aa8.95□□□□□ -0.98
PHC3-213ENST00000491258 LINC01387J3KSC0 135 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 SSTR4P31391 388 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 ATP11AP98196 1134 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 HYAL2Q12891 473 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 NAA30Q147X3 362 aaPredicted RBP8.94□□□□□ -0.98
PHC3-213ENST00000491258 CACTIN-AS1Q8N1I8 211 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 OR13H1Q8NG92 308 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 STK32AQ8WU08 396 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 SPACA7Q96KW9 195 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 LACRTQ9GZZ8 138 aa8.94□□□□□ -0.98
PHC3-213ENST00000491258 TNFRSF10BO14763 440 aa8.93□□□□□ -0.98
PHC3-213ENST00000491258 PTCD1O75127 700 aaKnown RBP8.93□□□□□ -0.98
PHC3-213ENST00000491258 COL13A1Q5TAT6 717 aaPredicted RBP8.93□□□□□ -0.98
PHC3-213ENST00000491258 TTC39BQ5VTQ0 682 aaPredicted RBP8.93□□□□□ -0.98
PHC3-213ENST00000491258 CEP135Q66GS9 1140 aa8.93□□□□□ -0.98
PHC3-213ENST00000491258 TXNDC11Q6PKC3 985 aa8.93□□□□□ -0.98
PHC3-213ENST00000491258 CAPN12Q6ZSI9 719 aa8.93□□□□□ -0.98
PHC3-213ENST00000491258 CDC25BP30305 580 aa8.92□□□□□ -0.98
PHC3-213ENST00000491258 ZAP70P43403 619 aa8.92□□□□□ -0.98
PHC3-213ENST00000491258 FAM69CQ0P6D2 419 aa8.92□□□□□ -0.98
PHC3-213ENST00000491258 ELOAQ14241 798 aaKnown RBP8.92□□□□□ -0.98
PHC3-213ENST00000491258 Q6ZS46 218 aa8.92□□□□□ -0.98
PHC3-213ENST00000491258 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.92□□□□□ -0.98
PHC3-213ENST00000491258 GALNT11Q8NCW6 608 aa8.92□□□□□ -0.98
PHC3-213ENST00000491258 COL26A1Q96A83 441 aa8.92□□□□□ -0.98
PHC3-213ENST00000491258 CXXC1Q9P0U4 656 aaPredicted RBP8.92□□□□□ -0.98
PHC3-213ENST00000491258 RAXQ9Y2V3 346 aa8.92□□□□□ -0.98
PHC3-213ENST00000491258 SMNDC1O75940 238 aaKnown RBP eCLIP8.91□□□□□ -0.98
PHC3-213ENST00000491258 CDC27P30260 824 aa8.91□□□□□ -0.98
PHC3-213ENST00000491258 SCNN1AP37088 669 aa8.91□□□□□ -0.98
PHC3-213ENST00000491258 SLC51AQ86UW1 340 aa8.91□□□□□ -0.98
PHC3-213ENST00000491258 GPR152Q8TDT2 470 aa8.91□□□□□ -0.98
PHC3-213ENST00000491258 FNDC3AQ9Y2H6 1198 aaKnown RBP8.91□□□□□ -0.98
PHC3-213ENST00000491258 WISP1O95388 367 aa8.9□□□□□ -0.98
PHC3-213ENST00000491258 ACAD11Q709F0 780 aa8.9□□□□□ -0.98
PHC3-213ENST00000491258 CD68P34810 354 aaPredicted RBP8.89□□□□□ -0.99
PHC3-213ENST00000491258 UBL7Q96S82 380 aaPredicted RBP8.89□□□□□ -0.99
PHC3-213ENST00000491258 CARD10Q9BWT7 1032 aa8.89□□□□□ -0.99
PHC3-213ENST00000491258 RASSF4Q9H2L5 321 aa8.89□□□□□ -0.99
PHC3-213ENST00000491258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.88□□□□□ -0.99
PHC3-213ENST00000491258 IGLV1-40P01703 118 aa8.88□□□□□ -0.99
PHC3-213ENST00000491258 FAM117BQ6P1L5 589 aa8.88□□□□□ -0.99
PHC3-213ENST00000491258 KCNK4Q9NYG8 393 aa8.88□□□□□ -0.99
PHC3-213ENST00000491258 STOML1Q9UBI4 398 aa8.88□□□□□ -0.99
PHC3-213ENST00000491258 GSC2O15499 205 aa8.87□□□□□ -0.99
PHC3-213ENST00000491258 DHX15O43143 795 aaKnown RBP8.87□□□□□ -0.99
PHC3-213ENST00000491258 CYP2E1P05181 493 aaPredicted RBP8.87□□□□□ -0.99
PHC3-213ENST00000491258 TMEM164Q5U3C3 297 aa8.87□□□□□ -0.99
PHC3-213ENST00000491258 CEP41Q9BYV8 373 aa8.87□□□□□ -0.99
PHC3-213ENST00000491258 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
PHC3-213ENST00000491258 STIM2Q9P246 746 aa8.87□□□□□ -0.99
PHC3-213ENST00000491258 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
PHC3-213ENST00000491258 NCAPG2Q86XI2 1143 aa8.86□□□□□ -0.99
PHC3-213ENST00000491258 ABTB2Q8N961 1025 aa8.86□□□□□ -0.99
PHC3-213ENST00000491258 UTP4Q969X6 686 aaKnown RBP8.86□□□□□ -0.99
PHC3-213ENST00000491258 SH2B1Q9NRF2 756 aaPredicted RBP8.86□□□□□ -0.99
PHC3-213ENST00000491258 FSCN2O14926 492 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 ZBTB39O15060 712 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 KIF4AO95239 1232 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 CD97P48960 835 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 DUOXA2Q1HG44 320 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 MCTP1Q6DN14 999 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 ADAMTSL4Q6UY14 1074 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 ARMC10Q8N2F6 343 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
PHC3-213ENST00000491258 ATG7O95352 703 aa8.84□□□□□ -0.99
PHC3-213ENST00000491258 TGFB1P01137 390 aa8.84□□□□□ -0.99
PHC3-213ENST00000491258 EPHA1P21709 976 aa8.84□□□□□ -0.99
PHC3-213ENST00000491258 KLHL23Q8NBE8 558 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms