RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 ZNF521Q96K83 1311 aa23.3■■□□□ 1.32
SBDS-204ENST00000490953 LINS1Q8NG48 757 aa23.29■■□□□ 1.32
SBDS-204ENST00000490953 GGA1Q9UJY5 639 aa23.29■■□□□ 1.32
SBDS-204ENST00000490953 ECE2O60344 883 aa23.28■■□□□ 1.32
SBDS-204ENST00000490953 ZC3H12CQ9C0D7 883 aaKnown RBP23.28■■□□□ 1.32
SBDS-204ENST00000490953 GREM2Q9H772 168 aa23.28■■□□□ 1.32
SBDS-204ENST00000490953 RTL9Q8NET4 1388 aa23.27■■□□□ 1.32
SBDS-204ENST00000490953 TMEM88BA6NKF7 163 aa23.27■■□□□ 1.32
SBDS-204ENST00000490953 DOK7Q18PE1 504 aa23.27■■□□□ 1.32
SBDS-204ENST00000490953 MKRN1Q9UHC7 482 aaKnown RBP23.27■■□□□ 1.32
SBDS-204ENST00000490953 F6X3S4 739 aa23.26■■□□□ 1.31
SBDS-204ENST00000490953 XDHP47989 1333 aa23.26■■□□□ 1.31
SBDS-204ENST00000490953 G3V3G9 751 aa23.25■■□□□ 1.31
SBDS-204ENST00000490953 PSMD14O00487 310 aa23.25■■□□□ 1.31
SBDS-204ENST00000490953 DCAF8Q5TAQ9 597 aa23.25■■□□□ 1.31
SBDS-204ENST00000490953 PLA2G12BQ9BX93 195 aa23.25■■□□□ 1.31
SBDS-204ENST00000490953 SCN9AQ15858 1988 aa23.24■■□□□ 1.31
SBDS-204ENST00000490953 CASP7P55210 303 aa23.24■■□□□ 1.31
SBDS-204ENST00000490953 CNOT7Q9UIV1 285 aaKnown RBP23.24■■□□□ 1.31
SBDS-204ENST00000490953 ZBTB12Q9Y330 459 aaPredicted RBP23.24■■□□□ 1.31
SBDS-204ENST00000490953 TRPM7Q96QT4 1865 aa23.24■■□□□ 1.31
SBDS-204ENST00000490953 BSDC1Q9NW68 430 aaPredicted RBP23.23■■□□□ 1.31
SBDS-204ENST00000490953 CNTNAP1P78357 1384 aa23.23■■□□□ 1.31
SBDS-204ENST00000490953 PSME4Q14997 1843 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 SHTN1A0MZ66 631 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 H7C1D1 291 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 ATP2B4P23634 1241 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 IGHMBP2P38935 993 aaKnown RBP23.22■■□□□ 1.31
SBDS-204ENST00000490953 FAM161AQ3B820 660 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 BEND3Q5T5X7 828 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 MICALL2Q8IY33 904 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 KCNQ5Q9NR82 932 aa23.22■■□□□ 1.31
SBDS-204ENST00000490953 ITGA6P23229 1130 aa23.21■■□□□ 1.31
SBDS-204ENST00000490953 TRPM4Q8TD43 1214 aa23.21■■□□□ 1.31
SBDS-204ENST00000490953 MINPP1Q9UNW1 487 aa23.21■■□□□ 1.31
SBDS-204ENST00000490953 E9PSI1 815 aa23.2■■□□□ 1.3
SBDS-204ENST00000490953 DPF2Q92785 391 aa23.2■■□□□ 1.3
SBDS-204ENST00000490953 TRAF5O00463 557 aa23.19■■□□□ 1.3
SBDS-204ENST00000490953 CSF1RP07333 972 aa23.19■■□□□ 1.3
SBDS-204ENST00000490953 RPS12P25398 132 aaKnown RBP23.19■■□□□ 1.3
SBDS-204ENST00000490953 FMR1Q06787 632 aaKnown RBP eCLIP23.19■■□□□ 1.3
SBDS-204ENST00000490953 HIRAP54198 1017 aaPredicted RBP23.18■■□□□ 1.3
SBDS-204ENST00000490953 SLC4A10Q6U841 1118 aa23.18■■□□□ 1.3
SBDS-204ENST00000490953 MPHOSPH8Q99549 860 aa23.18■■□□□ 1.3
SBDS-204ENST00000490953 ABT1Q9ULW3 272 aaKnown RBP23.18■■□□□ 1.3
SBDS-204ENST00000490953 MED23Q9ULK4 1368 aa23.17■■□□□ 1.3
SBDS-204ENST00000490953 HSPA1AP0DMV8 641 aaKnown RBP23.17■■□□□ 1.3
SBDS-204ENST00000490953 HSPA1BP0DMV9 641 aaKnown RBP23.17■■□□□ 1.3
SBDS-204ENST00000490953 CCT4P50991 539 aaKnown RBP23.17■■□□□ 1.3
SBDS-204ENST00000490953 ZC3H15Q8WU90 426 aaKnown RBP23.17■■□□□ 1.3
SBDS-204ENST00000490953 CHMP3Q9Y3E7 222 aa23.17■■□□□ 1.3
SBDS-204ENST00000490953 ANKRD18BA2A2Z9 1011 aa23.16■■□□□ 1.3
SBDS-204ENST00000490953 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
SBDS-204ENST00000490953 GRM8O00222 908 aa23.16■■□□□ 1.3
SBDS-204ENST00000490953 VIL1P09327 827 aaKnown RBP23.16■■□□□ 1.3
SBDS-204ENST00000490953 SAMD7Q7Z3H4 446 aa23.16■■□□□ 1.3
SBDS-204ENST00000490953 GLIS2Q9BZE0 524 aaPredicted RBP23.16■■□□□ 1.3
SBDS-204ENST00000490953 PGAP2Q9UHJ9 254 aa23.16■■□□□ 1.3
SBDS-204ENST00000490953 A0A1B0GUL6 1792 aa23.16■■□□□ 1.3
SBDS-204ENST00000490953 WTIPA6NIX2 430 aaPredicted RBP23.15■■□□□ 1.3
SBDS-204ENST00000490953 ALDH1L1O75891 902 aa23.15■■□□□ 1.3
SBDS-204ENST00000490953 VEGFBP49765 207 aa23.15■■□□□ 1.3
SBDS-204ENST00000490953 FOXO4P98177 505 aa23.15■■□□□ 1.3
SBDS-204ENST00000490953 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
SBDS-204ENST00000490953 TBC1D10BQ4KMP7 808 aaPredicted RBP23.15■■□□□ 1.3
SBDS-204ENST00000490953 SRCIN1Q9C0H9 1055 aa23.15■■□□□ 1.3
SBDS-204ENST00000490953 C9orf78Q9NZ63 289 aaPredicted RBP23.15■■□□□ 1.3
SBDS-204ENST00000490953 RASSF10A6NK89 507 aa23.14■■□□□ 1.29
SBDS-204ENST00000490953 IFIT5Q13325 482 aaKnown RBP23.14■■□□□ 1.29
SBDS-204ENST00000490953 DEFB115Q30KQ5 88 aa23.14■■□□□ 1.29
SBDS-204ENST00000490953 MRPL50Q8N5N7 158 aaKnown RBP23.14■■□□□ 1.29
SBDS-204ENST00000490953 ANKRD2Q9GZV1 360 aa23.14■■□□□ 1.29
SBDS-204ENST00000490953 LEMD3Q9Y2U8 911 aa23.14■■□□□ 1.29
SBDS-204ENST00000490953 RBM26Q5T8P6 1007 aaKnown RBP23.13■■□□□ 1.29
SBDS-204ENST00000490953 RSBN1LQ6PCB5 846 aaPredicted RBP23.13■■□□□ 1.29
SBDS-204ENST00000490953 PODNQ7Z5L7 613 aa23.13■■□□□ 1.29
SBDS-204ENST00000490953 ZNF609O15014 1411 aa23.13■■□□□ 1.29
SBDS-204ENST00000490953 EGFRP00533 1210 aa23.12■■□□□ 1.29
SBDS-204ENST00000490953 KIF4BQ2VIQ3 1234 aa23.12■■□□□ 1.29
SBDS-204ENST00000490953 CST9Q5W186 159 aa23.12■■□□□ 1.29
SBDS-204ENST00000490953 LMBR1LQ6UX01 489 aa23.12■■□□□ 1.29
SBDS-204ENST00000490953 CDC37L1Q7L3B6 337 aa23.12■■□□□ 1.29
SBDS-204ENST00000490953 CDCA7LQ96GN5 454 aa23.12■■□□□ 1.29
SBDS-204ENST00000490953 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
SBDS-204ENST00000490953 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 USP17L3A6NCW0 530 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 USP17L4A6NCW7 530 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 CELF2O95319 508 aaKnown RBP23.11■■□□□ 1.29
SBDS-204ENST00000490953 KCNJ4P48050 445 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 CHRNDQ07001 517 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 EPHA10Q5JZY3 1008 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 USP17L1Q7RTZ2 530 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 AGBL3Q8NEM8 1001 aa23.11■■□□□ 1.29
SBDS-204ENST00000490953 PTPRCP08575 1304 aa23.1■■□□□ 1.29
SBDS-204ENST00000490953 PAXIP1Q6ZW49 1069 aaPredicted RBP23.1■■□□□ 1.29
SBDS-204ENST00000490953 SSH1Q8WYL5 1049 aa23.1■■□□□ 1.29
SBDS-204ENST00000490953 ZNF408Q9H9D4 720 aa23.1■■□□□ 1.29
SBDS-204ENST00000490953 CCDC57Q2TAC2 916 aa23.09■■□□□ 1.29
SBDS-204ENST00000490953 TAF7LQ5H9L4 462 aa23.09■■□□□ 1.29
SBDS-204ENST00000490953 IFFO2Q5TF58 517 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms