RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 XDHP47989 1333 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 NFKBIEO00221 500 aa19.72■□□□□ 0.75
TRA2A-208ENST00000490942 PTPN12Q05209 780 aaKnown RBP19.72■□□□□ 0.75
TRA2A-208ENST00000490942 CACNA1SQ13698 1873 aa19.72■□□□□ 0.75
TRA2A-208ENST00000490942 POLA2Q14181 598 aa19.72■□□□□ 0.75
TRA2A-208ENST00000490942 CEP85Q6P2H3 762 aa19.72■□□□□ 0.75
TRA2A-208ENST00000490942 EYA2O00167 538 aa19.71■□□□□ 0.75
TRA2A-208ENST00000490942 DPP8Q6V1X1 898 aaPredicted RBP19.71■□□□□ 0.75
TRA2A-208ENST00000490942 RIPOR2Q9Y4F9 1068 aa19.71■□□□□ 0.75
TRA2A-208ENST00000490942 MROH5Q6ZUA9 1318 aa19.71■□□□□ 0.75
TRA2A-208ENST00000490942 TAF1P21675 1872 aa19.71■□□□□ 0.75
TRA2A-208ENST00000490942 HMMRO75330 724 aa19.7■□□□□ 0.74
TRA2A-208ENST00000490942 ZNF594Q96JF6 807 aaPredicted RBP19.7■□□□□ 0.74
TRA2A-208ENST00000490942 CNNM1Q9NRU3 951 aa19.7■□□□□ 0.74
TRA2A-208ENST00000490942 ZNF219Q9P2Y4 722 aaPredicted RBP19.7■□□□□ 0.74
TRA2A-208ENST00000490942 NSFL1CQ9UNZ2 370 aaKnown RBP19.7■□□□□ 0.74
TRA2A-208ENST00000490942 LEMD3Q9Y2U8 911 aa19.7■□□□□ 0.74
TRA2A-208ENST00000490942 LTBP1Q14766 1721 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 PNMA6EA0A0J9YXQ4 647 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 LMNB1P20700 586 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 ATP2B4P23634 1241 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 GPSM2P81274 684 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 OLFM4Q6UX06 510 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 CRBNQ96SW2 442 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 C1orf115Q9H7X2 142 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 ANKIB1Q9P2G1 1089 aa19.69■□□□□ 0.74
TRA2A-208ENST00000490942 ZC3H4Q9UPT8 1303 aaKnown RBP19.69■□□□□ 0.74
TRA2A-208ENST00000490942 IL15P40933 162 aaPredicted RBP19.68■□□□□ 0.74
TRA2A-208ENST00000490942 CHRNDQ07001 517 aa19.68■□□□□ 0.74
TRA2A-208ENST00000490942 EYA3Q99504 573 aa19.68■□□□□ 0.74
TRA2A-208ENST00000490942 GGA1Q9UJY5 639 aa19.68■□□□□ 0.74
TRA2A-208ENST00000490942 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
TRA2A-208ENST00000490942 TBC1D16Q8TBP0 767 aa19.67■□□□□ 0.74
TRA2A-208ENST00000490942 DUOX1Q9NRD9 1551 aa19.66■□□□□ 0.74
TRA2A-208ENST00000490942 IARSP41252 1262 aaKnown RBP19.65■□□□□ 0.74
TRA2A-208ENST00000490942 KIAA2012Q0VF49 1180 aa19.65■□□□□ 0.74
TRA2A-208ENST00000490942 C15orf52Q6ZUT6 534 aaKnown RBP19.65■□□□□ 0.74
TRA2A-208ENST00000490942 ATG9AQ7Z3C6 839 aa19.65■□□□□ 0.74
TRA2A-208ENST00000490942 KLHDC4Q8TBB5 520 aa19.65■□□□□ 0.74
TRA2A-208ENST00000490942 PUS3Q9BZE2 481 aaKnown RBP19.65■□□□□ 0.74
TRA2A-208ENST00000490942 POLLQ9UGP5 575 aa19.65■□□□□ 0.74
TRA2A-208ENST00000490942 UFL1O94874 794 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 PDE8BO95263 885 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 RASSF7Q02833 373 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 UBE4AQ14139 1066 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 LRRC24Q50LG9 513 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 HSP90AB4PQ58FF6 505 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 VGLL2Q8N8G2 317 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 MED23Q9ULK4 1368 aa19.64■□□□□ 0.73
TRA2A-208ENST00000490942 C6orf229H3BNL8 230 aa19.63■□□□□ 0.73
TRA2A-208ENST00000490942 G3BP1Q13283 466 aaKnown RBP eCLIP19.63■□□□□ 0.73
TRA2A-208ENST00000490942 WASHC4Q2M389 1173 aa19.63■□□□□ 0.73
TRA2A-208ENST00000490942 METTL24Q5JXM2 366 aa19.63■□□□□ 0.73
TRA2A-208ENST00000490942 SIRT2Q8IXJ6 389 aa19.63■□□□□ 0.73
TRA2A-208ENST00000490942 PA2G4Q9UQ80 394 aaKnown RBP19.63■□□□□ 0.73
TRA2A-208ENST00000490942 SPEF2Q9C093 1822 aa19.62■□□□□ 0.73
TRA2A-208ENST00000490942 PRELPP51888 382 aa19.62■□□□□ 0.73
TRA2A-208ENST00000490942 SLC51AQ86UW1 340 aa19.62■□□□□ 0.73
TRA2A-208ENST00000490942 ZC3H12CQ9C0D7 883 aaKnown RBP19.62■□□□□ 0.73
TRA2A-208ENST00000490942 ZNF277Q9NRM2 450 aaPredicted RBP19.62■□□□□ 0.73
TRA2A-208ENST00000490942 CEP126Q9P2H0 1117 aa19.62■□□□□ 0.73
TRA2A-208ENST00000490942 GOLGB1Q14789 3259 aaKnown RBP19.62■□□□□ 0.73
TRA2A-208ENST00000490942 SBF1O95248 1867 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 PPIP5K2O43314 1243 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 SURF6O75683 361 aaKnown RBP19.61■□□□□ 0.73
TRA2A-208ENST00000490942 KCNJ4P48050 445 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 PUM3Q15397 648 aaKnown RBP19.61■□□□□ 0.73
TRA2A-208ENST00000490942 C9orf131Q5VYM1 1079 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 ERC1Q8IUD2 1116 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 JDP2Q8WYK2 163 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 SIL1Q9H173 461 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 RNF181Q9P0P0 153 aa19.61■□□□□ 0.73
TRA2A-208ENST00000490942 LARGE2Q8N3Y3 721 aa19.6■□□□□ 0.73
TRA2A-208ENST00000490942 EXOC6Q8TAG9 804 aa19.6■□□□□ 0.73
TRA2A-208ENST00000490942 GPR108Q9NPR9 543 aa19.6■□□□□ 0.73
TRA2A-208ENST00000490942 AKAP2Q9Y2D5 859 aa19.6■□□□□ 0.73
TRA2A-208ENST00000490942 CHD4Q14839 1912 aa19.6■□□□□ 0.73
TRA2A-208ENST00000490942 A0A1B0GUL6 1792 aa19.6■□□□□ 0.73
TRA2A-208ENST00000490942 IRS2Q9Y4H2 1338 aa19.59■□□□□ 0.73
TRA2A-208ENST00000490942 ZBTB22O15209 634 aa19.59■□□□□ 0.73
TRA2A-208ENST00000490942 TAF5LO75529 589 aa19.59■□□□□ 0.73
TRA2A-208ENST00000490942 FGFR2P21802 821 aa19.59■□□□□ 0.73
TRA2A-208ENST00000490942 LPIN2Q92539 896 aa19.59■□□□□ 0.73
TRA2A-208ENST00000490942 PCDHB15Q9Y5E8 787 aa19.59■□□□□ 0.73
TRA2A-208ENST00000490942 DICER1Q9UPY3 1922 aaKnown RBP19.59■□□□□ 0.73
TRA2A-208ENST00000490942 RAB11FIP3O75154 756 aa19.58■□□□□ 0.72
TRA2A-208ENST00000490942 HDAC1Q13547 482 aaPredicted RBP19.58■□□□□ 0.72
TRA2A-208ENST00000490942 AOC3Q16853 763 aa19.58■□□□□ 0.72
TRA2A-208ENST00000490942 NIM1KQ8IY84 436 aa19.58■□□□□ 0.72
TRA2A-208ENST00000490942 HELBQ8NG08 1087 aaPredicted RBP19.58■□□□□ 0.72
TRA2A-208ENST00000490942 FZD9O00144 591 aa19.57■□□□□ 0.72
TRA2A-208ENST00000490942 IFIT1P09914 478 aaKnown RBP19.57■□□□□ 0.72
TRA2A-208ENST00000490942 PODNQ7Z5L7 613 aa19.57■□□□□ 0.72
TRA2A-208ENST00000490942 COA1Q9GZY4 146 aa19.57■□□□□ 0.72
TRA2A-208ENST00000490942 DCTPP1Q9H773 170 aa19.57■□□□□ 0.72
TRA2A-208ENST00000490942 ZNRF3Q9ULT6 936 aa19.57■□□□□ 0.72
TRA2A-208ENST00000490942 UTRNP46939 3433 aa19.57■□□□□ 0.72
TRA2A-208ENST00000490942 SASH1O94885 1247 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms