RNA–Protein interactions for RNA: ENST00000490927.5

SCRN3-210, Transcript of secernin 3, human

TSL 3

Gene SCRN3, Length 929 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCRN3-210	ENST00000490927	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.74	□□□□□ -0.21
SCRN3-210	ENST00000490927	SPTLC3	Q9NUV7	552 aa		13.74	□□□□□ -0.21
SCRN3-210	ENST00000490927	ERBB3	P21860	1342 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	GJB2	P29033	226 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	KRT85	P78386	507 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	HMGN5	P82970	282 aa	Known RBP	13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	LHX8	Q68G74	356 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	MPRIP	Q6WCQ1	1025 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	RBM43	Q6ZSC3	357 aa	Known RBP	13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	AACS	Q86V21	672 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	PIBF1	Q8WXW3	757 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	SLC52A2	Q9HAB3	445 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	CNPY2	Q9Y2B0	182 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	RGPD5	Q99666	1765 aa		13.73	□□□□□ -0.21
SCRN3-210	ENST00000490927	AFDN	P55196	1824 aa	Known RBP	13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	NEURL1B	A8MQ27	555 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	SLC27A2	O14975	620 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	KDM4A	O75164	1064 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	GCKR	Q14397	625 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	ESCO1	Q5FWF5	840 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	ATL3	Q6DD88	541 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	PRPF40B	Q6NWY9	871 aa	Known RBP	13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	ZNF790	Q6PG37	636 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	BLOC1S2	Q6QNY1	142 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	EAF2	Q96CJ1	260 aa	Predicted RBP	13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	GPR108	Q9NPR9	543 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	DDX19A	Q9NUU7	478 aa	Known RBP	13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	SPG7	Q9UQ90	795 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	ARFGEF2	Q9Y6D5	1785 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	C1orf167	Q5SNV9	1468 aa		13.72	□□□□□ -0.21
SCRN3-210	ENST00000490927	SOS2	Q07890	1332 aa	Predicted RBP	13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	NPHP3	Q7Z494	1330 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	IGKV5-2	P06315	115 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	POTEJ	P0CG39	1038 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	CCDC192	P0DO97	292 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	RPS6KB1	P23443	525 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	ST3GAL1	Q11201	340 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	ME3	Q16798	604 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	LRP10	Q7Z4F1	713 aa		13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	LLPH	Q9BRT6	129 aa	Known RBP	13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	BICC1	Q9H694	974 aa	Known RBP	13.71	□□□□□ -0.21
SCRN3-210	ENST00000490927	KDM6A	O15550	1401 aa	Predicted RBP	13.71	□□□□□ -0.22
SCRN3-210	ENST00000490927	MYH15	Q9Y2K3	1946 aa		13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	PPP1R37	O75864	691 aa		13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	HMGB1	P09429	215 aa	Known RBP	13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	PRKCSH	P14314	528 aa	Predicted RBP	13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	RFX5	P48382	616 aa	Predicted RBP	13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	NMI	Q13287	307 aa	Predicted RBP	13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	PROSER3	Q2NL68	480 aa		13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	ADCK5	Q3MIX3	580 aa		13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	FBXL16	Q8N461	479 aa		13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	GJD4	Q96KN9	370 aa	Predicted RBP	13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	GLI3	P10071	1580 aa		13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	PALLD	Q8WX93	1383 aa		13.7	□□□□□ -0.22
SCRN3-210	ENST00000490927	SH3TC1	Q8TE82	1336 aa		13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	GOLGA6L6	A8MZA4	724 aa		13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	TAF5L	O75529	589 aa		13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	LARGE1	O95461	756 aa		13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	MAP4K4	O95819	1239 aa	Predicted RBP	13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	PTMA	P06454	111 aa	Known RBP	13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	LARP1B	Q659C4	914 aa	Known RBP	13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	CCDC83	Q8IWF9	413 aa		13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	TPCN1	Q9ULQ1	816 aa		13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	BOLA1	Q9Y3E2	137 aa		13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SCRN3-210	ENST00000490927	UBR2	Q8IWV8	1755 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	PSD	A5PKW4	1024 aa	Predicted RBP	13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927		G3V3G9	751 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	SNRPA1	P09661	255 aa	Known RBP	13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	CWF19L2	Q2TBE0	894 aa	Known RBP	13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	NOL8	Q76FK4	1167 aa	Known RBP	13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	RIC3	Q7Z5B4	369 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	IFNL2	Q8IZJ0	200 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	RAPGEF4	Q8WZA2	1011 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	DCAF5	Q96JK2	942 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	CHAMP1	Q96JM3	812 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	ATG3	Q9NT62	314 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	CPD	O75976	1380 aa		13.68	□□□□□ -0.22
SCRN3-210	ENST00000490927	NUP188	Q5SRE5	1749 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	ADCY5	O95622	1261 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	PHKG2	P15735	406 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	TAT	P17735	454 aa	Predicted RBP	13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	KCNJ4	P48050	445 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	DNM1	Q05193	864 aa	Known RBP	13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	KRT28	Q7Z3Y7	464 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	RNF214	Q8ND24	703 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	MYRIP	Q8NFW9	859 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	FAM200A	Q8TCP9	573 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	ORAI2	Q96SN7	254 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	HAUS7	Q99871	368 aa		13.67	□□□□□ -0.22
SCRN3-210	ENST00000490927	FSD1	Q9BTV5	496 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms